RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 ZNF862O60290 1169 aa20.52■□□□□ 0.88
PDLIM7-209ENST00000503346 ACRP10323 421 aa20.52■□□□□ 0.88
PDLIM7-209ENST00000503346 MCM7P33993 719 aa20.52■□□□□ 0.88
PDLIM7-209ENST00000503346 THPOP40225 353 aa20.52■□□□□ 0.88
PDLIM7-209ENST00000503346 IGBP1P78318 339 aa20.52■□□□□ 0.88
PDLIM7-209ENST00000503346 SPIRE1Q08AE8 756 aa20.52■□□□□ 0.88
PDLIM7-209ENST00000503346 UGCGQ16739 394 aa20.52■□□□□ 0.88
PDLIM7-209ENST00000503346 LRIT3Q3SXY7 679 aa20.52■□□□□ 0.88
PDLIM7-209ENST00000503346 ZNF484Q5JVG2 852 aa20.52■□□□□ 0.88
PDLIM7-209ENST00000503346 TTC38Q5R3I4 469 aa20.52■□□□□ 0.88
PDLIM7-209ENST00000503346 ZNF618Q5T7W0 954 aa20.52■□□□□ 0.88
PDLIM7-209ENST00000503346 MCTP1Q6DN14 999 aa20.52■□□□□ 0.88
PDLIM7-209ENST00000503346 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.52■□□□□ 0.889e-10■■■□□ 15.9
PDLIM7-209ENST00000503346 TMEM60Q9H2L4 133 aa20.52■□□□□ 0.88
PDLIM7-209ENST00000503346 OATP04181 439 aa20.51■□□□□ 0.87
PDLIM7-209ENST00000503346 PDCP20941 246 aa20.51■□□□□ 0.87
PDLIM7-209ENST00000503346 TOB1P50616 345 aaPredicted RBP20.51■□□□□ 0.87
PDLIM7-209ENST00000503346 GPNMBQ14956 572 aa20.51■□□□□ 0.87
PDLIM7-209ENST00000503346 ZNF174Q15697 407 aa20.51■□□□□ 0.87
PDLIM7-209ENST00000503346 RUFY4Q6ZNE9 571 aa20.51■□□□□ 0.87
PDLIM7-209ENST00000503346 ZNF365Q70YC5 407 aa20.51■□□□□ 0.87
PDLIM7-209ENST00000503346 HSCBQ8IWL3 235 aa20.51■□□□□ 0.87
PDLIM7-209ENST00000503346 TRAPPC12Q8WVT3 735 aa20.51■□□□□ 0.87
PDLIM7-209ENST00000503346 PCDHA12Q9UN75 941 aa20.51■□□□□ 0.87
PDLIM7-209ENST00000503346 PCDHA2Q9Y5H9 948 aa20.51■□□□□ 0.87
PDLIM7-209ENST00000503346 ZBTB42B2RXF5 422 aa20.5■□□□□ 0.87
PDLIM7-209ENST00000503346 RPLP2P05387 115 aaKnown RBP20.5■□□□□ 0.87
PDLIM7-209ENST00000503346 PRKCEQ02156 737 aa20.5■□□□□ 0.87
PDLIM7-209ENST00000503346 EPHA7Q15375 998 aa20.5■□□□□ 0.87
PDLIM7-209ENST00000503346 RASIP1Q5U651 963 aa20.5■□□□□ 0.87
PDLIM7-209ENST00000503346 MTHFD1LQ6UB35 978 aa20.5■□□□□ 0.87
PDLIM7-209ENST00000503346 TTC12Q9H892 705 aaPredicted RBP20.5■□□□□ 0.87
PDLIM7-209ENST00000503346 NRBP2Q9NSY0 501 aa20.5■□□□□ 0.87
PDLIM7-209ENST00000503346 CEP131Q9UPN4 1083 aa20.5■□□□□ 0.87
PDLIM7-209ENST00000503346 RSPH10B2B2RC85 870 aa20.49■□□□□ 0.87
PDLIM7-209ENST00000503346 NBNO60934 754 aa20.49■□□□□ 0.87
PDLIM7-209ENST00000503346 FGBP02675 491 aa20.49■□□□□ 0.87
PDLIM7-209ENST00000503346 CXCL10P02778 98 aa20.49■□□□□ 0.87
PDLIM7-209ENST00000503346 RSPH10BP0C881 870 aa20.49■□□□□ 0.87
PDLIM7-209ENST00000503346 TXKP42681 527 aa20.49■□□□□ 0.87
PDLIM7-209ENST00000503346 PSMC5P62195 406 aa20.49■□□□□ 0.87
PDLIM7-209ENST00000503346 FAM26DQ5JW98 314 aa20.49■□□□□ 0.87
PDLIM7-209ENST00000503346 NCAPH2Q6IBW4 605 aa20.49■□□□□ 0.87
PDLIM7-209ENST00000503346 DEFB128Q7Z7B8 93 aa20.49■□□□□ 0.87
PDLIM7-209ENST00000503346 RSPH3Q86UC2 560 aa20.49■□□□□ 0.87
PDLIM7-209ENST00000503346 HERVK_113Q902F9 699 aa20.49■□□□□ 0.87
PDLIM7-209ENST00000503346 ZBTB10Q96DT7 871 aa20.49■□□□□ 0.87
PDLIM7-209ENST00000503346 RNPC3Q96LT9 517 aaKnown RBP20.49■□□□□ 0.87
PDLIM7-209ENST00000503346 SMIM35A0A1B0GVV1 85 aa20.48■□□□□ 0.87
PDLIM7-209ENST00000503346 DKC1O60832 514 aaKnown RBP eCLIP20.48■□□□□ 0.87
PDLIM7-209ENST00000503346 STBD1O95210 358 aa20.48■□□□□ 0.87
PDLIM7-209ENST00000503346 P4HBP07237 508 aaKnown RBP20.48■□□□□ 0.87
PDLIM7-209ENST00000503346 OR52Z1P0C646 297 aa20.48■□□□□ 0.87
PDLIM7-209ENST00000503346 KLRC1P26715 233 aa20.48■□□□□ 0.87
PDLIM7-209ENST00000503346 QARSP47897 775 aaKnown RBP20.48■□□□□ 0.87
PDLIM7-209ENST00000503346 NBR1Q14596 966 aa20.48■□□□□ 0.87
PDLIM7-209ENST00000503346 MBTPS1Q14703 1052 aa20.48■□□□□ 0.87
PDLIM7-209ENST00000503346 RILPL1Q5EBL4 403 aa20.48■□□□□ 0.87
PDLIM7-209ENST00000503346 XKR3Q5GH77 459 aa20.48■□□□□ 0.87
PDLIM7-209ENST00000503346 C4orf32Q8N8J7 132 aa20.48■□□□□ 0.87
PDLIM7-209ENST00000503346 BANK1Q8NDB2 785 aa20.48■□□□□ 0.87
PDLIM7-209ENST00000503346 DNAJB3Q8WWF6 145 aa20.48■□□□□ 0.87
PDLIM7-209ENST00000503346 PCDHB6Q9Y5E3 794 aa20.48■□□□□ 0.87
PDLIM7-209ENST00000503346 C22orf31O95567 290 aa20.47■□□□□ 0.87
PDLIM7-209ENST00000503346 CTSHP09668 335 aa20.47■□□□□ 0.87
PDLIM7-209ENST00000503346 MGAT3Q09327 533 aa20.47■□□□□ 0.87
PDLIM7-209ENST00000503346 TRMT1LQ7Z2T5 733 aaKnown RBP20.47■□□□□ 0.87
PDLIM7-209ENST00000503346 NIFKQ9BYG3 293 aaKnown RBP20.47■□□□□ 0.87
PDLIM7-209ENST00000503346 TRIOBPQ9H2D6 2365 aa20.47■□□□□ 0.87
PDLIM7-209ENST00000503346 TANC1Q9C0D5 1861 aa20.46■□□□□ 0.87
PDLIM7-209ENST00000503346 MAGEB2O15479 319 aa20.46■□□□□ 0.87
PDLIM7-209ENST00000503346 SYT1P21579 422 aa20.46■□□□□ 0.87
PDLIM7-209ENST00000503346 FXR1P51114 621 aaKnown RBP eCLIP20.46■□□□□ 0.87
PDLIM7-209ENST00000503346 TARBP2Q15633 366 aaKnown RBP20.46■□□□□ 0.87
PDLIM7-209ENST00000503346 OTOP2Q7RTS6 562 aa20.46■□□□□ 0.87
PDLIM7-209ENST00000503346 C4orf19Q8IY42 314 aa20.46■□□□□ 0.87
PDLIM7-209ENST00000503346 NME8Q8N427 588 aa20.46■□□□□ 0.87
PDLIM7-209ENST00000503346 NEK9Q8TD19 979 aa20.46■□□□□ 0.87
PDLIM7-209ENST00000503346 HSD17B14Q9BPX1 270 aa20.46■□□□□ 0.87
PDLIM7-209ENST00000503346 FTOQ9C0B1 505 aaKnown RBP eCLIP20.46■□□□□ 0.87
PDLIM7-209ENST00000503346 FAM49AQ9H0Q0 323 aaPredicted RBP20.46■□□□□ 0.87
PDLIM7-209ENST00000503346 MTIF3Q9H2K0 278 aaKnown RBP20.46■□□□□ 0.87
PDLIM7-209ENST00000503346 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.46■□□□□ 0.87
PDLIM7-209ENST00000503346 FOXD4L1Q9NU39 408 aa20.46■□□□□ 0.87
PDLIM7-209ENST00000503346 CHRNA1P02708 482 aa20.45■□□□□ 0.86
PDLIM7-209ENST00000503346 ACTN1P12814 892 aa20.45■□□□□ 0.86
PDLIM7-209ENST00000503346 BRAPQ7Z569 592 aa20.45■□□□□ 0.86
PDLIM7-209ENST00000503346 DYDC2Q96IM9 177 aa20.45■□□□□ 0.86
PDLIM7-209ENST00000503346 EIF2AK1Q9BQI3 630 aaKnown RBP20.45■□□□□ 0.86
PDLIM7-209ENST00000503346 LXNQ9BS40 222 aa20.45■□□□□ 0.86
PDLIM7-209ENST00000503346 RGL1Q9NZL6 768 aa20.45■□□□□ 0.86
PDLIM7-209ENST00000503346 WRAP73Q9P2S5 460 aaPredicted RBP20.45■□□□□ 0.86
PDLIM7-209ENST00000503346 SEPT9Q9UHD8 586 aaPredicted RBP20.45■□□□□ 0.86
PDLIM7-209ENST00000503346 TRIP12Q14669 1992 aaPredicted RBP20.45■□□□□ 0.86
PDLIM7-209ENST00000503346 VPS37CA5D8V6 355 aaPredicted RBP20.44■□□□□ 0.86
PDLIM7-209ENST00000503346 POTEMA6NI47 508 aa20.44■□□□□ 0.86
PDLIM7-209ENST00000503346 LAD1O00515 517 aa20.44■□□□□ 0.86
PDLIM7-209ENST00000503346 SOX1O00570 391 aaPredicted RBP20.44■□□□□ 0.86
PDLIM7-209ENST00000503346 SLITRK3O94933 977 aa20.44■□□□□ 0.86
PDLIM7-209ENST00000503346 MRPS6P82932 125 aaKnown RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms