RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 AGPAT5Q9NUQ2 364 aa12.77□□□□□ -0.37
USP46-204ENST00000503060 EPN1Q9Y6I3 576 aaPredicted RBP12.77□□□□□ -0.37
USP46-204ENST00000503060 A0A1W2PQJ5 194 aa12.76□□□□□ -0.37
USP46-204ENST00000503060 GAS7O60861 476 aa12.76□□□□□ -0.37
USP46-204ENST00000503060 MEA1Q16626 185 aa12.76□□□□□ -0.37
USP46-204ENST00000503060 ZC3H12AQ5D1E8 599 aaKnown RBP12.76□□□□□ -0.37
USP46-204ENST00000503060 NBPF12Q5TAG4 269 aaPredicted RBP12.76□□□□□ -0.37
USP46-204ENST00000503060 CLEC4DQ8WXI8 215 aa12.76□□□□□ -0.37
USP46-204ENST00000503060 BHMT2Q9H2M3 363 aa12.76□□□□□ -0.37
USP46-204ENST00000503060 KCTD10Q9H3F6 313 aa12.76□□□□□ -0.37
USP46-204ENST00000503060 SIK3Q9Y2K2 1263 aa12.76□□□□□ -0.37
USP46-204ENST00000503060 RABGAP1Q9Y3P9 1069 aa12.76□□□□□ -0.37
USP46-204ENST00000503060 COL4A3BPQ9Y5P4 624 aa12.76□□□□□ -0.37
USP46-204ENST00000503060 CHMP2AO43633 222 aa12.76□□□□□ -0.37
USP46-204ENST00000503060 ARP10275 920 aa12.76□□□□□ -0.37
USP46-204ENST00000503060 DGKZQ13574 1117 aa12.76□□□□□ -0.37
USP46-204ENST00000503060 CTTNQ14247 550 aaKnown RBP12.76□□□□□ -0.37
USP46-204ENST00000503060 SFR1Q86XK3 245 aa12.76□□□□□ -0.37
USP46-204ENST00000503060 DYDC2Q96IM9 177 aa12.76□□□□□ -0.37
USP46-204ENST00000503060 ZNF577Q9BSK1 485 aa12.76□□□□□ -0.37
USP46-204ENST00000503060 RUSC1Q9BVN2 902 aa12.76□□□□□ -0.37
USP46-204ENST00000503060 TANGO6Q9C0B7 1094 aa12.76□□□□□ -0.37
USP46-204ENST00000503060 SLC38A10Q9HBR0 1119 aa12.76□□□□□ -0.37
USP46-204ENST00000503060 RPTORQ8N122 1335 aa12.75□□□□□ -0.37
USP46-204ENST00000503060 CCDC189A1A4V9 331 aa12.75□□□□□ -0.37
USP46-204ENST00000503060 NFIBO00712 420 aa12.75□□□□□ -0.37
USP46-204ENST00000503060 KIF5CO60282 957 aa12.75□□□□□ -0.37
USP46-204ENST00000503060 SLITRK3O94933 977 aa12.75□□□□□ -0.37
USP46-204ENST00000503060 NDUFA10O95299 355 aa12.75□□□□□ -0.37
USP46-204ENST00000503060 GHRHRQ02643 423 aa12.75□□□□□ -0.37
USP46-204ENST00000503060 CCDC40Q4G0X9 1142 aa12.75□□□□□ -0.37
USP46-204ENST00000503060 ARHGAP29Q52LW3 1261 aa12.75□□□□□ -0.37
USP46-204ENST00000503060 DCAF15Q66K64 600 aa12.75□□□□□ -0.37
USP46-204ENST00000503060 MCF2L2Q86YR7 1114 aa12.75□□□□□ -0.37
USP46-204ENST00000503060 ZC3H3Q8IXZ2 948 aaKnown RBP12.75□□□□□ -0.37
USP46-204ENST00000503060 C1orf131Q8NDD1 294 aaKnown RBP12.75□□□□□ -0.37
USP46-204ENST00000503060 MXRA8Q9BRK3 442 aa12.75□□□□□ -0.37
USP46-204ENST00000503060 WDR11Q9BZH6 1224 aa12.75□□□□□ -0.37
USP46-204ENST00000503060 IRX2Q9BZI1 471 aaPredicted RBP12.75□□□□□ -0.37
USP46-204ENST00000503060 ZNHIT6Q9NWK9 470 aaKnown RBP12.75□□□□□ -0.37
USP46-204ENST00000503060 COL20A1Q9P218 1284 aa12.75□□□□□ -0.37
USP46-204ENST00000503060 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.75□□□□□ -0.37
USP46-204ENST00000503060 V9GYY5 206 aaPredicted RBP12.75□□□□□ -0.37
USP46-204ENST00000503060 ZNF541Q9H0D2 1346 aa12.75□□□□□ -0.37
USP46-204ENST00000503060 GNA14O95837 355 aa12.74□□□□□ -0.37
USP46-204ENST00000503060 VCAM1P19320 739 aa12.74□□□□□ -0.37
USP46-204ENST00000503060 ARHGAP25P42331 645 aa12.74□□□□□ -0.37
USP46-204ENST00000503060 POU5F1Q01860 360 aaKnown RBP12.74□□□□□ -0.37
USP46-204ENST00000503060 MTMR2Q13614 643 aa12.74□□□□□ -0.37
USP46-204ENST00000503060 KRT26Q7Z3Y9 468 aa12.74□□□□□ -0.37
USP46-204ENST00000503060 TPH2Q8IWU9 490 aa12.74□□□□□ -0.37
USP46-204ENST00000503060 CPXCR1Q8N123 301 aa12.74□□□□□ -0.37
USP46-204ENST00000503060 LRRN4CLQ8ND94 238 aa12.74□□□□□ -0.37
USP46-204ENST00000503060 TEKT3Q9BXF9 490 aa12.74□□□□□ -0.37
USP46-204ENST00000503060 UNC45AQ9H3U1 944 aa12.74□□□□□ -0.37
USP46-204ENST00000503060 RAVER2Q9HCJ3 691 aaKnown RBP12.74□□□□□ -0.37
USP46-204ENST00000503060 PPP1R9AQ9ULJ8 1098 aa12.74□□□□□ -0.37
USP46-204ENST00000503060 GOLGB1Q14789 3259 aaKnown RBP12.74□□□□□ -0.37
USP46-204ENST00000503060 FLOT1O75955 427 aa12.74□□□□□ -0.37
USP46-204ENST00000503060 ALAS1P13196 640 aa12.74□□□□□ -0.37
USP46-204ENST00000503060 MUTP22033 750 aa12.74□□□□□ -0.37
USP46-204ENST00000503060 CASP5P51878 434 aa12.74□□□□□ -0.37
USP46-204ENST00000503060 USP14P54578 494 aa12.74□□□□□ -0.37
USP46-204ENST00000503060 EDRF1Q3B7T1 1238 aa12.74□□□□□ -0.37
USP46-204ENST00000503060 EPM2AIP1Q7L775 607 aaPredicted RBP12.74□□□□□ -0.37
USP46-204ENST00000503060 DPH6Q7L8W6 267 aa12.74□□□□□ -0.37
USP46-204ENST00000503060 PDCL2Q8N4E4 241 aa12.74□□□□□ -0.37
USP46-204ENST00000503060 ZNF397Q8NF99 534 aaPredicted RBP12.74□□□□□ -0.37
USP46-204ENST00000503060 PIGOQ8TEQ8 1089 aa12.74□□□□□ -0.37
USP46-204ENST00000503060 ARPC5LQ9BPX5 153 aa12.74□□□□□ -0.37
USP46-204ENST00000503060 REXO2Q9Y3B8 237 aaKnown RBP12.74□□□□□ -0.37
USP46-204ENST00000503060 RBBP6Q7Z6E9 1792 aaKnown RBP12.74□□□□□ -0.37
USP46-204ENST00000503060 RSPH10B2B2RC85 870 aa12.73□□□□□ -0.37
USP46-204ENST00000503060 PPP1R12AO14974 1030 aaPredicted RBP12.73□□□□□ -0.37
USP46-204ENST00000503060 TBCAO75347 108 aaKnown RBP12.73□□□□□ -0.37
USP46-204ENST00000503060 RSPH10BP0C881 870 aa12.73□□□□□ -0.37
USP46-204ENST00000503060 NAT1P18440 290 aa12.73□□□□□ -0.37
USP46-204ENST00000503060 CD151P48509 253 aa12.73□□□□□ -0.37
USP46-204ENST00000503060 MARSP56192 900 aaKnown RBP12.73□□□□□ -0.37
USP46-204ENST00000503060 MAP3K9P80192 1104 aa12.73□□□□□ -0.37
USP46-204ENST00000503060 EPHA7Q15375 998 aa12.73□□□□□ -0.37
USP46-204ENST00000503060 RINT1Q6NUQ1 792 aa12.73□□□□□ -0.37
USP46-204ENST00000503060 B3GNT9Q6UX72 402 aa12.73□□□□□ -0.37
USP46-204ENST00000503060 RSPH9Q9H1X1 276 aaPredicted RBP12.73□□□□□ -0.37
USP46-204ENST00000503060 RPAP3Q9H6T3 665 aaPredicted RBP12.73□□□□□ -0.37
USP46-204ENST00000503060 MAP3K20Q9NYL2 800 aaKnown RBP12.73□□□□□ -0.37
USP46-204ENST00000503060 ZNF112Q9UJU3 913 aa12.73□□□□□ -0.37
USP46-204ENST00000503060 DOCK1Q14185 1865 aa12.73□□□□□ -0.37
USP46-204ENST00000503060 IPO5O00410 1097 aaKnown RBP12.73□□□□□ -0.37
USP46-204ENST00000503060 BCRP11274 1271 aa12.73□□□□□ -0.37
USP46-204ENST00000503060 GAP43P17677 238 aa12.73□□□□□ -0.37
USP46-204ENST00000503060 ITGB5P18084 799 aa12.73□□□□□ -0.37
USP46-204ENST00000503060 PEX19P40855 299 aa12.73□□□□□ -0.37
USP46-204ENST00000503060 CDK17Q00537 523 aa12.73□□□□□ -0.37
USP46-204ENST00000503060 SPP2Q13103 211 aa12.73□□□□□ -0.37
USP46-204ENST00000503060 ELF2Q15723 593 aa12.73□□□□□ -0.37
USP46-204ENST00000503060 ZNF569Q5MCW4 686 aa12.73□□□□□ -0.37
USP46-204ENST00000503060 SCYL3Q8IZE3 742 aa12.73□□□□□ -0.37
USP46-204ENST00000503060 IL31RAQ8NI17 732 aa12.73□□□□□ -0.37
USP46-204ENST00000503060 SYTL5Q8TDW5 730 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms