RNA–Protein interactions for RNA: ENST00000498837.1

SEC61A1-207, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2

Gene SEC61A1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-207ENST00000498837 SMRP1Q8NCR6 262 aa16.8■□□□□ 0.28
SEC61A1-207ENST00000498837 PPP2R3CQ969Q6 453 aa16.8■□□□□ 0.28
SEC61A1-207ENST00000498837 FTHL17Q9BXU8 183 aa16.8■□□□□ 0.28
SEC61A1-207ENST00000498837 JADE2Q9NQC1 790 aa16.8■□□□□ 0.28
SEC61A1-207ENST00000498837 PCDHA6Q9UN73 950 aa16.8■□□□□ 0.28
SEC61A1-207ENST00000498837 PCDHA8Q9Y5H6 950 aa16.8■□□□□ 0.28
SEC61A1-207ENST00000498837 IGSF9BQ9UPX0 1349 aa16.79■□□□□ 0.28
SEC61A1-207ENST00000498837 SGSM2O43147 1006 aa16.79■□□□□ 0.28
SEC61A1-207ENST00000498837 PPFIA3O75145 1194 aa16.79■□□□□ 0.28
SEC61A1-207ENST00000498837 GLP2RO95838 553 aa16.79■□□□□ 0.28
SEC61A1-207ENST00000498837 STAG3L1P0CL83 205 aa16.79■□□□□ 0.28
SEC61A1-207ENST00000498837 SCG2P13521 617 aa16.79■□□□□ 0.28
SEC61A1-207ENST00000498837 IBSPP21815 317 aaPredicted RBP16.79■□□□□ 0.28
SEC61A1-207ENST00000498837 COASYQ13057 564 aa16.79■□□□□ 0.28
SEC61A1-207ENST00000498837 PLCB4Q15147 1175 aa16.79■□□□□ 0.28
SEC61A1-207ENST00000498837 IER5LQ5T953 404 aa16.79■□□□□ 0.28
SEC61A1-207ENST00000498837 RAB11FIP4Q86YS3 637 aa16.79■□□□□ 0.28
SEC61A1-207ENST00000498837 CCDC82Q8N4S0 544 aa16.79■□□□□ 0.28
SEC61A1-207ENST00000498837 PRSS33Q8NF86 280 aa16.79■□□□□ 0.28
SEC61A1-207ENST00000498837 MAP4K1Q92918 833 aa16.79■□□□□ 0.28
SEC61A1-207ENST00000498837 LZTS2Q9BRK4 669 aa16.79■□□□□ 0.28
SEC61A1-207ENST00000498837 CELF4Q9BZC1 486 aaKnown RBP16.79■□□□□ 0.28
SEC61A1-207ENST00000498837 TMX1Q9H3N1 280 aa16.79■□□□□ 0.28
SEC61A1-207ENST00000498837 SLC9A2Q9UBY0 812 aa16.79■□□□□ 0.28
SEC61A1-207ENST00000498837 BARX2Q9UMQ3 279 aaPredicted RBP16.79■□□□□ 0.28
SEC61A1-207ENST00000498837 TRPC6Q9Y210 931 aa16.79■□□□□ 0.28
SEC61A1-207ENST00000498837 PCDHA2Q9Y5H9 948 aa16.79■□□□□ 0.28
SEC61A1-207ENST00000498837 USP34Q70CQ2 3546 aa16.78■□□□□ 0.28
SEC61A1-207ENST00000498837 TMEM221A6NGB7 291 aa16.78■□□□□ 0.28
SEC61A1-207ENST00000498837 LOC730098B7Z3J9 87 aa16.78■□□□□ 0.28
SEC61A1-207ENST00000498837 M0QZ92 97 aa16.78■□□□□ 0.28
SEC61A1-207ENST00000498837 M0R296 226 aa16.78■□□□□ 0.28
SEC61A1-207ENST00000498837 MAFGO15525 162 aa16.78■□□□□ 0.28
SEC61A1-207ENST00000498837 PRC1O43663 620 aa16.78■□□□□ 0.28
SEC61A1-207ENST00000498837 GNAQP50148 359 aa16.78■□□□□ 0.28
SEC61A1-207ENST00000498837 PAK2Q13177 524 aa16.78■□□□□ 0.28
SEC61A1-207ENST00000498837 TMEM266Q2M3C6 531 aa16.78■□□□□ 0.28
SEC61A1-207ENST00000498837 CASC1Q6TDU7 716 aa16.78■□□□□ 0.28
SEC61A1-207ENST00000498837 NFXL1Q6ZNB6 911 aa16.78■□□□□ 0.28
SEC61A1-207ENST00000498837 TRIM67Q6ZTA4 783 aa16.78■□□□□ 0.28
SEC61A1-207ENST00000498837 BMP8AQ7Z5Y6 402 aa16.78■□□□□ 0.28
SEC61A1-207ENST00000498837 CYP2W1Q8TAV3 490 aa16.78■□□□□ 0.28
SEC61A1-207ENST00000498837 PBXIP1Q96AQ6 731 aa16.78■□□□□ 0.28
SEC61A1-207ENST00000498837 AZI2Q9H6S1 392 aa16.78■□□□□ 0.28
SEC61A1-207ENST00000498837 JPH1Q9HDC5 661 aaPredicted RBP16.78■□□□□ 0.28
SEC61A1-207ENST00000498837 LRFN2Q9ULH4 789 aa16.78■□□□□ 0.28
SEC61A1-207ENST00000498837 RBM8AQ9Y5S9 174 aaKnown RBP16.78■□□□□ 0.28
SEC61A1-207ENST00000498837 CACNA1HO95180 2353 aa16.78■□□□□ 0.28
SEC61A1-207ENST00000498837 SPDYE3A6NKU9 549 aa16.77■□□□□ 0.28
SEC61A1-207ENST00000498837 PER2O15055 1255 aa16.77■□□□□ 0.28
SEC61A1-207ENST00000498837 MGEA5O60502 916 aa16.77■□□□□ 0.28
SEC61A1-207ENST00000498837 RPLP2P05387 115 aaKnown RBP16.77■□□□□ 0.28
SEC61A1-207ENST00000498837 RBM10P98175 930 aaKnown RBP16.77■□□□□ 0.28
SEC61A1-207ENST00000498837 MXRA8Q9BRK3 442 aa16.77■□□□□ 0.28
SEC61A1-207ENST00000498837 CDHR5Q9HBB8 845 aa16.77■□□□□ 0.28
SEC61A1-207ENST00000498837 KCNH7Q9NS40 1196 aa16.77■□□□□ 0.28
SEC61A1-207ENST00000498837 USP15Q9Y4E8 981 aaPredicted RBP16.77■□□□□ 0.28
SEC61A1-207ENST00000498837 KDM3AQ9Y4C1 1321 aa16.76■□□□□ 0.27
SEC61A1-207ENST00000498837 CCDC69A6NI79 296 aa16.76■□□□□ 0.27
SEC61A1-207ENST00000498837 SH2B2O14492 632 aaPredicted RBP16.76■□□□□ 0.27
SEC61A1-207ENST00000498837 ARP10275 920 aa16.76■□□□□ 0.27
SEC61A1-207ENST00000498837 STAT5BP51692 787 aa16.76■□□□□ 0.27
SEC61A1-207ENST00000498837 ACTR2P61160 394 aa16.76■□□□□ 0.27
SEC61A1-207ENST00000498837 ZXDAP98168 799 aa16.76■□□□□ 0.27
SEC61A1-207ENST00000498837 KRT76Q01546 638 aa16.76■□□□□ 0.27
SEC61A1-207ENST00000498837 NFX1Q12986 1120 aaKnown RBP16.76■□□□□ 0.27
SEC61A1-207ENST00000498837 CBX2Q14781 532 aaPredicted RBP16.76■□□□□ 0.27
SEC61A1-207ENST00000498837 MTHFD1LQ6UB35 978 aa16.76■□□□□ 0.27
SEC61A1-207ENST00000498837 PLPPR4Q7Z2D5 763 aa16.76■□□□□ 0.27
SEC61A1-207ENST00000498837 PGBD1Q96JS3 809 aa16.76■□□□□ 0.27
SEC61A1-207ENST00000498837 TLE6Q9H808 572 aa16.76■□□□□ 0.27
SEC61A1-207ENST00000498837 SMIM35A0A1B0GVV1 85 aa16.75■□□□□ 0.27
SEC61A1-207ENST00000498837 SARSP49591 514 aaKnown RBP16.75■□□□□ 0.27
SEC61A1-207ENST00000498837 ITGB3BPQ13352 177 aaPredicted RBP16.75■□□□□ 0.27
SEC61A1-207ENST00000498837 SPOUT1Q5T280 376 aaKnown RBP16.75■□□□□ 0.27
SEC61A1-207ENST00000498837 FAM102BQ5T8I3 360 aa16.75■□□□□ 0.27
SEC61A1-207ENST00000498837 HEATR3Q7Z4Q2 680 aa16.75■□□□□ 0.27
SEC61A1-207ENST00000498837 TMTC2Q8N394 836 aa16.75■□□□□ 0.27
SEC61A1-207ENST00000498837 NME8Q8N427 588 aa16.75■□□□□ 0.27
SEC61A1-207ENST00000498837 VN1R2Q8NFZ6 395 aa16.75■□□□□ 0.27
SEC61A1-207ENST00000498837 MICAL1Q8TDZ2 1067 aa16.75■□□□□ 0.27
SEC61A1-207ENST00000498837 TNPO1Q92973 898 aaKnown RBP16.75■□□□□ 0.27
SEC61A1-207ENST00000498837 RPGRIP1Q96KN7 1286 aa16.75■□□□□ 0.27
SEC61A1-207ENST00000498837 MTA3Q9BTC8 594 aa16.75■□□□□ 0.27
SEC61A1-207ENST00000498837 PHF7Q9BWX1 381 aaPredicted RBP16.75■□□□□ 0.27
SEC61A1-207ENST00000498837 ERVK-5Q9HDB9 667 aa16.75■□□□□ 0.27
SEC61A1-207ENST00000498837 HCSTQ9UBK5 93 aa16.75■□□□□ 0.27
SEC61A1-207ENST00000498837 GINS2Q9Y248 185 aa16.75■□□□□ 0.27
SEC61A1-207ENST00000498837 NOC2LQ9Y3T9 749 aaKnown RBP16.75■□□□□ 0.27
SEC61A1-207ENST00000498837 PCDHB7Q9Y5E2 793 aa16.75■□□□□ 0.27
SEC61A1-207ENST00000498837 NFASCO94856 1347 aa16.74■□□□□ 0.27
SEC61A1-207ENST00000498837 KLRC1P26715 233 aa16.74■□□□□ 0.27
SEC61A1-207ENST00000498837 MCM5P33992 734 aa16.74■□□□□ 0.27
SEC61A1-207ENST00000498837 ERVFC1P60507 584 aa16.74■□□□□ 0.27
SEC61A1-207ENST00000498837 TMEM40Q8WWA1 233 aa16.74■□□□□ 0.27
SEC61A1-207ENST00000498837 TMEM87BQ96K49 555 aa16.74■□□□□ 0.27
SEC61A1-207ENST00000498837 SDF4Q9BRK5 362 aa16.74■□□□□ 0.27
SEC61A1-207ENST00000498837 LRRC2Q9BYS8 371 aa16.74■□□□□ 0.27
SEC61A1-207ENST00000498837 PCDHB12Q9Y5F1 795 aa16.74■□□□□ 0.27
SEC61A1-207ENST00000498837 ZFHX2Q9C0A1 2572 aaPredicted RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms