RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 EPHA7Q15375 998 aa18.84■□□□□ 0.61
PRKCB-210ENST00000498739 MARCH8Q5T0T0 291 aa18.84■□□□□ 0.61
PRKCB-210ENST00000498739 ZBTB10Q96DT7 871 aa18.84■□□□□ 0.61
PRKCB-210ENST00000498739 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.84■□□□□ 0.61
PRKCB-210ENST00000498739 MTMR6Q9Y217 621 aa18.84■□□□□ 0.61
PRKCB-210ENST00000498739 COL1A2P08123 1366 aa18.83■□□□□ 0.61
PRKCB-210ENST00000498739 POTEMA6NI47 508 aa18.83■□□□□ 0.6
PRKCB-210ENST00000498739 CKBP12277 381 aa18.83■□□□□ 0.6
PRKCB-210ENST00000498739 BMP8BP34820 402 aa18.83■□□□□ 0.6
PRKCB-210ENST00000498739 TECP42680 631 aa18.83■□□□□ 0.6
PRKCB-210ENST00000498739 PSMC5P62195 406 aa18.83■□□□□ 0.6
PRKCB-210ENST00000498739 RBL2Q08999 1139 aa18.83■□□□□ 0.6
PRKCB-210ENST00000498739 PTGDRQ13258 359 aa18.83■□□□□ 0.6
PRKCB-210ENST00000498739 PPIGQ13427 754 aaKnown RBP eCLIP18.83■□□□□ 0.6
PRKCB-210ENST00000498739 TRIM71Q2Q1W2 868 aaKnown RBP18.83■□□□□ 0.6
PRKCB-210ENST00000498739 ZNF484Q5JVG2 852 aa18.83■□□□□ 0.6
PRKCB-210ENST00000498739 RUFY4Q6ZNE9 571 aa18.83■□□□□ 0.6
PRKCB-210ENST00000498739 C4orf32Q8N8J7 132 aa18.83■□□□□ 0.6
PRKCB-210ENST00000498739 DYDC2Q96IM9 177 aa18.83■□□□□ 0.6
PRKCB-210ENST00000498739 PRO3102Q9H379 93 aa18.83■□□□□ 0.6
PRKCB-210ENST00000498739 NRBP2Q9NSY0 501 aa18.83■□□□□ 0.6
PRKCB-210ENST00000498739 MBLAC1A4D2B0 266 aaPredicted RBP18.82■□□□□ 0.6
PRKCB-210ENST00000498739 DKC1O60832 514 aaKnown RBP eCLIP18.82■□□□□ 0.6
PRKCB-210ENST00000498739 P4HBP07237 508 aaKnown RBP18.82■□□□□ 0.6
PRKCB-210ENST00000498739 IQCF3P0C7M6 154 aa18.82■□□□□ 0.6
PRKCB-210ENST00000498739 SELPP16109 830 aa18.82■□□□□ 0.6
PRKCB-210ENST00000498739 THPOP40225 353 aa18.82■□□□□ 0.6
PRKCB-210ENST00000498739 QARSP47897 775 aaKnown RBP18.82■□□□□ 0.6
PRKCB-210ENST00000498739 CYP4A11Q02928 519 aa18.82■□□□□ 0.6
PRKCB-210ENST00000498739 RESTQ13127 1097 aa18.82■□□□□ 0.6
PRKCB-210ENST00000498739 BECN1Q14457 450 aa18.82■□□□□ 0.6
PRKCB-210ENST00000498739 TMEM266Q2M3C6 531 aa18.82■□□□□ 0.6
PRKCB-210ENST00000498739 LRRC8DQ7L1W4 858 aa18.82■□□□□ 0.6
PRKCB-210ENST00000498739 EIF2AK1Q9BQI3 630 aaKnown RBP18.82■□□□□ 0.6
PRKCB-210ENST00000498739 RGL1Q9NZL6 768 aa18.82■□□□□ 0.6
PRKCB-210ENST00000498739 SEPT9Q9UHD8 586 aaPredicted RBP18.82■□□□□ 0.6
PRKCB-210ENST00000498739 CEP131Q9UPN4 1083 aa18.82■□□□□ 0.6
PRKCB-210ENST00000498739 LAD1O00515 517 aa18.81■□□□□ 0.6
PRKCB-210ENST00000498739 KLRC1P26715 233 aa18.81■□□□□ 0.6
PRKCB-210ENST00000498739 EPHB4P54760 987 aa18.81■□□□□ 0.6
PRKCB-210ENST00000498739 CTTNQ14247 550 aaKnown RBP18.81■□□□□ 0.6
PRKCB-210ENST00000498739 XKR3Q5GH77 459 aa18.81■□□□□ 0.6
PRKCB-210ENST00000498739 ZNF618Q5T7W0 954 aa18.81■□□□□ 0.6
PRKCB-210ENST00000498739 TAF2Q6P1X5 1199 aa18.81■□□□□ 0.6
PRKCB-210ENST00000498739 MTHFD1LQ6UB35 978 aa18.81■□□□□ 0.6
PRKCB-210ENST00000498739 LXNQ9BS40 222 aa18.81■□□□□ 0.6
PRKCB-210ENST00000498739 DDX11L8A8MPP1 907 aa18.8■□□□□ 0.6
PRKCB-210ENST00000498739 ZBTB42B2RXF5 422 aa18.8■□□□□ 0.6
PRKCB-210ENST00000498739 CTSHP09668 335 aa18.8■□□□□ 0.6
PRKCB-210ENST00000498739 ACRP10323 421 aa18.8■□□□□ 0.6
PRKCB-210ENST00000498739 DEFB128Q7Z7B8 93 aa18.8■□□□□ 0.6
PRKCB-210ENST00000498739 RSPH3Q86UC2 560 aa18.8■□□□□ 0.6
PRKCB-210ENST00000498739 NEK9Q8TD19 979 aa18.8■□□□□ 0.6
PRKCB-210ENST00000498739 DNAJB3Q8WWF6 145 aa18.8■□□□□ 0.6
PRKCB-210ENST00000498739 FAM49AQ9H0Q0 323 aaPredicted RBP18.8■□□□□ 0.6
PRKCB-210ENST00000498739 IL23AQ9NPF7 189 aa18.8■□□□□ 0.6
PRKCB-210ENST00000498739 WRAP73Q9P2S5 460 aaPredicted RBP18.8■□□□□ 0.6
PRKCB-210ENST00000498739 TANC1Q9C0D5 1861 aa18.8■□□□□ 0.6
PRKCB-210ENST00000498739 SMIM35A0A1B0GVV1 85 aa18.79■□□□□ 0.6
PRKCB-210ENST00000498739 TMEM150BA6NC51 233 aa18.79■□□□□ 0.6
PRKCB-210ENST00000498739 RSPH10B2B2RC85 870 aa18.79■□□□□ 0.6
PRKCB-210ENST00000498739 CAND2O75155 1236 aa18.79■□□□□ 0.6
PRKCB-210ENST00000498739 STBD1O95210 358 aa18.79■□□□□ 0.6
PRKCB-210ENST00000498739 RSPH10BP0C881 870 aa18.79■□□□□ 0.6
PRKCB-210ENST00000498739 RFC2P35250 354 aa18.79■□□□□ 0.6
PRKCB-210ENST00000498739 FXR2P51116 673 aaKnown RBP eCLIP18.79■□□□□ 0.61e-6■■■□□ 17.5
PRKCB-210ENST00000498739 ATP2C1P98194 919 aaPredicted RBP18.79■□□□□ 0.6
PRKCB-210ENST00000498739 MTERF2Q49AM1 385 aa18.79■□□□□ 0.6
PRKCB-210ENST00000498739 FAM173BQ6P4H8 233 aa18.79■□□□□ 0.6
PRKCB-210ENST00000498739 TPH2Q8IWU9 490 aa18.79■□□□□ 0.6
PRKCB-210ENST00000498739 TDHQ8IZJ6 230 aa18.79■□□□□ 0.6
PRKCB-210ENST00000498739 SH2D3AQ9BRG2 576 aa18.79■□□□□ 0.6
PRKCB-210ENST00000498739 ZSCAN16Q9H4T2 348 aaPredicted RBP18.79■□□□□ 0.6
PRKCB-210ENST00000498739 ZSWIM4Q9H7M6 989 aa18.79■□□□□ 0.6
PRKCB-210ENST00000498739 PCDHA2Q9Y5H9 948 aa18.79■□□□□ 0.6
PRKCB-210ENST00000498739 SLITRK3O94933 977 aa18.78■□□□□ 0.6
PRKCB-210ENST00000498739 C22orf31O95567 290 aa18.78■□□□□ 0.6
PRKCB-210ENST00000498739 PDIA4P13667 645 aaKnown RBP18.78■□□□□ 0.6
PRKCB-210ENST00000498739 PRPHP41219 470 aa18.78■□□□□ 0.6
PRKCB-210ENST00000498739 C9orf50Q5SZB4 431 aa18.78■□□□□ 0.6
PRKCB-210ENST00000498739 FOXD4L5Q5VV16 416 aaPredicted RBP18.78■□□□□ 0.6
PRKCB-210ENST00000498739 PLA2G4FQ68DD2 849 aa18.78■□□□□ 0.6
PRKCB-210ENST00000498739 PSRC1Q6PGN9 363 aaPredicted RBP18.78■□□□□ 0.6
PRKCB-210ENST00000498739 TRAF7Q6Q0C0 670 aa18.78■□□□□ 0.6
PRKCB-210ENST00000498739 DTHD1Q6ZMT9 781 aa18.78■□□□□ 0.6
PRKCB-210ENST00000498739 ANO5Q75V66 913 aa18.78■□□□□ 0.6
PRKCB-210ENST00000498739 C16orf59Q7L2K0 433 aa18.78■□□□□ 0.6
PRKCB-210ENST00000498739 C4orf19Q8IY42 314 aa18.78■□□□□ 0.6
PRKCB-210ENST00000498739 RPUSD2Q8IZ73 545 aaKnown RBP18.78■□□□□ 0.6
PRKCB-210ENST00000498739 ERMNQ8TAM6 284 aa18.78■□□□□ 0.6
PRKCB-210ENST00000498739 FOXD4L4Q8WXT5 416 aaPredicted RBP18.78■□□□□ 0.6
PRKCB-210ENST00000498739 HSD17B14Q9BPX1 270 aa18.78■□□□□ 0.6
PRKCB-210ENST00000498739 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.78■□□□□ 0.6
PRKCB-210ENST00000498739 NIFKQ9BYG3 293 aaKnown RBP18.78■□□□□ 0.6
PRKCB-210ENST00000498739 RAB34Q9BZG1 259 aa18.78■□□□□ 0.6
PRKCB-210ENST00000498739 TRIP12Q14669 1992 aaPredicted RBP18.77■□□□□ 0.6
PRKCB-210ENST00000498739 PARNO95453 639 aaKnown RBP18.77■□□□□ 0.6
PRKCB-210ENST00000498739 YWHABP31946 246 aaKnown RBP18.77■□□□□ 0.6
PRKCB-210ENST00000498739 TBC1D8BQ0IIM8 1120 aa18.77■□□□□ 0.6
PRKCB-210ENST00000498739 SF3A1Q15459 793 aaKnown RBP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms