RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 TRPV2Q9Y5S1 764 aa10.51□□□□□ -0.73
CCDC171-209ENST00000498725 EVPLQ92817 2033 aa10.51□□□□□ -0.73
CCDC171-209ENST00000498725 MYO10Q9HD67 2058 aa10.51□□□□□ -0.73
CCDC171-209ENST00000498725 CFAP54Q96N23 3096 aa10.51□□□□□ -0.73
CCDC171-209ENST00000498725 PNMA6FA0A0J9YX94 578 aa10.5□□□□□ -0.73
CCDC171-209ENST00000498725 GSTTP1A0A1W2PQM5 241 aa10.5□□□□□ -0.73
CCDC171-209ENST00000498725 TBKBP1A7MCY6 615 aa10.5□□□□□ -0.73
CCDC171-209ENST00000498725 CYTH3O43739 400 aa10.5□□□□□ -0.73
CCDC171-209ENST00000498725 STAM2O75886 525 aa10.5□□□□□ -0.73
CCDC171-209ENST00000498725 INSRRP14616 1297 aa10.5□□□□□ -0.73
CCDC171-209ENST00000498725 NFX1Q12986 1120 aaKnown RBP10.5□□□□□ -0.73
CCDC171-209ENST00000498725 TRAF1Q13077 416 aa10.5□□□□□ -0.73
CCDC171-209ENST00000498725 GRM4Q14833 912 aa10.5□□□□□ -0.73
CCDC171-209ENST00000498725 DIEXFQ68CQ4 756 aaKnown RBP10.5□□□□□ -0.73
CCDC171-209ENST00000498725 THNSL1Q8IYQ7 743 aa10.5□□□□□ -0.73
CCDC171-209ENST00000498725 CUL5Q93034 780 aa10.5□□□□□ -0.73
CCDC171-209ENST00000498725 RIPOR3Q96MK2 946 aa10.5□□□□□ -0.73
CCDC171-209ENST00000498725 PPP1R16BQ96T49 567 aa10.5□□□□□ -0.73
CCDC171-209ENST00000498725 SMOC2Q9H3U7 446 aa10.5□□□□□ -0.73
CCDC171-209ENST00000498725 RIOX1Q9H6W3 641 aa10.5□□□□□ -0.73
CCDC171-209ENST00000498725 CNNM2Q9H8M5 875 aa10.5□□□□□ -0.73
CCDC171-209ENST00000498725 ERAP1Q9NZ08 941 aa10.5□□□□□ -0.73
CCDC171-209ENST00000498725 TRPC6Q9Y210 931 aa10.5□□□□□ -0.73
CCDC171-209ENST00000498725 GINS2Q9Y248 185 aa10.5□□□□□ -0.73
CCDC171-209ENST00000498725 PCDHB7Q9Y5E2 793 aa10.5□□□□□ -0.73
CCDC171-209ENST00000498725 FRMPD4Q14CM0 1322 aa10.5□□□□□ -0.73
CCDC171-209ENST00000498725 IFIT3O14879 490 aaKnown RBP10.49□□□□□ -0.73
CCDC171-209ENST00000498725 FGF18O76093 207 aa10.49□□□□□ -0.73
CCDC171-209ENST00000498725 CA8P35219 290 aa10.49□□□□□ -0.73
CCDC171-209ENST00000498725 DUSP6Q16828 381 aa10.49□□□□□ -0.73
CCDC171-209ENST00000498725 FAM102BQ5T8I3 360 aa10.49□□□□□ -0.73
CCDC171-209ENST00000498725 IER5Q5VY09 327 aa10.49□□□□□ -0.73
CCDC171-209ENST00000498725 PCNX4Q63HM2 1172 aa10.49□□□□□ -0.73
CCDC171-209ENST00000498725 KREMEN2Q8NCW0 462 aa10.49□□□□□ -0.73
CCDC171-209ENST00000498725 SEPT1Q8WYJ6 367 aa10.49□□□□□ -0.73
CCDC171-209ENST00000498725 SUSD6Q92537 303 aa10.49□□□□□ -0.73
CCDC171-209ENST00000498725 FTHL17Q9BXU8 183 aa10.49□□□□□ -0.73
CCDC171-209ENST00000498725 IRF2BPLQ9H1B7 796 aa10.49□□□□□ -0.73
CCDC171-209ENST00000498725 SMARCAD1Q9H4L7 1026 aa10.49□□□□□ -0.73
CCDC171-209ENST00000498725 ENTPD7Q9NQZ7 604 aa10.49□□□□□ -0.73
CCDC171-209ENST00000498725 ZFHX2Q9C0A1 2572 aaPredicted RBP10.48□□□□□ -0.73
CCDC171-209ENST00000498725 ERICH2A1L162 156 aa10.48□□□□□ -0.73
CCDC171-209ENST00000498725 DENND3A2RUS2 1198 aa10.48□□□□□ -0.73
CCDC171-209ENST00000498725 MBLAC1A4D2B0 266 aaPredicted RBP10.48□□□□□ -0.73
CCDC171-209ENST00000498725 PRR23AA6NEV1 266 aa10.48□□□□□ -0.73
CCDC171-209ENST00000498725 GALR2O43603 387 aaPredicted RBP10.48□□□□□ -0.73
CCDC171-209ENST00000498725 MGEA5O60502 916 aa10.48□□□□□ -0.73
CCDC171-209ENST00000498725 WEE2P0C1S8 567 aa10.48□□□□□ -0.73
CCDC171-209ENST00000498725 KCNA2P16389 499 aa10.48□□□□□ -0.73
CCDC171-209ENST00000498725 ATF7P17544 494 aaPredicted RBP10.48□□□□□ -0.73
CCDC171-209ENST00000498725 UBE2SQ16763 222 aa10.48□□□□□ -0.73
CCDC171-209ENST00000498725 ANKRD54Q6NXT1 300 aa10.48□□□□□ -0.73
CCDC171-209ENST00000498725 FRMD5Q7Z6J6 570 aa10.48□□□□□ -0.73
CCDC171-209ENST00000498725 CRIPAKQ8N1N5 446 aa10.48□□□□□ -0.73
CCDC171-209ENST00000498725 TMEM105Q8N8V8 129 aa10.48□□□□□ -0.73
CCDC171-209ENST00000498725 COLGALT1Q8NBJ5 622 aa10.48□□□□□ -0.73
CCDC171-209ENST00000498725 GIMAP8Q8ND71 665 aaPredicted RBP10.48□□□□□ -0.73
CCDC171-209ENST00000498725 ATP8B4Q8TF62 1192 aa10.48□□□□□ -0.73
CCDC171-209ENST00000498725 SENP7Q9BQF6 1050 aa10.48□□□□□ -0.73
CCDC171-209ENST00000498725 DSCC1Q9BVC3 393 aa10.48□□□□□ -0.73
CCDC171-209ENST00000498725 CELF4Q9BZC1 486 aaKnown RBP10.48□□□□□ -0.73
CCDC171-209ENST00000498725 TMX1Q9H3N1 280 aa10.48□□□□□ -0.73
CCDC171-209ENST00000498725 AAASQ9NRG9 546 aa10.48□□□□□ -0.73
CCDC171-209ENST00000498725 TYW1Q9NV66 732 aaKnown RBP10.48□□□□□ -0.73
CCDC171-209ENST00000498725 RRN3P2A6NIE6 340 aa10.47□□□□□ -0.73
CCDC171-209ENST00000498725 BRD1O95696 1058 aa10.47□□□□□ -0.73
CCDC171-209ENST00000498725 ASGR2P07307 311 aa10.47□□□□□ -0.73
CCDC171-209ENST00000498725 SRGAP2BP0DMP2 458 aa10.47□□□□□ -0.73
CCDC171-209ENST00000498725 FGFR1P11362 822 aa10.47□□□□□ -0.73
CCDC171-209ENST00000498725 PBX3P40426 434 aa10.47□□□□□ -0.73
CCDC171-209ENST00000498725 SARSP49591 514 aaKnown RBP10.47□□□□□ -0.73
CCDC171-209ENST00000498725 NT5C2P49902 561 aa10.47□□□□□ -0.73
CCDC171-209ENST00000498725 FOXK2Q01167 660 aa10.47□□□□□ -0.73
CCDC171-209ENST00000498725 KRT76Q01546 638 aa10.47□□□□□ -0.73
CCDC171-209ENST00000498725 TRDNQ13061 729 aa10.47□□□□□ -0.73
CCDC171-209ENST00000498725 WTAPQ15007 396 aa10.47□□□□□ -0.73
CCDC171-209ENST00000498725 SYCE2Q6PIF2 218 aa10.47□□□□□ -0.73
CCDC171-209ENST00000498725 PCYT2Q99447 389 aa10.47□□□□□ -0.73
CCDC171-209ENST00000498725 ADAM2Q99965 735 aa10.47□□□□□ -0.73
CCDC171-209ENST00000498725 MYL10Q9BUA6 226 aa10.47□□□□□ -0.73
CCDC171-209ENST00000498725 S1PR5Q9H228 398 aa10.47□□□□□ -0.73
CCDC171-209ENST00000498725 MFSD1Q9H3U5 465 aa10.47□□□□□ -0.73
CCDC171-209ENST00000498725 CDHR5Q9HBB8 845 aa10.47□□□□□ -0.73
CCDC171-209ENST00000498725 IGSF9BQ9UPX0 1349 aa10.47□□□□□ -0.73
CCDC171-209ENST00000498725 ZDBF2Q9HCK1 2354 aa10.47□□□□□ -0.73
CCDC171-209ENST00000498725 HIDE1A8MVS5 230 aa10.46□□□□□ -0.73
CCDC171-209ENST00000498725 C2CD4DB7Z1M9 353 aa10.46□□□□□ -0.73
CCDC171-209ENST00000498725 MEIS2O14770 477 aa10.46□□□□□ -0.73
CCDC171-209ENST00000498725 RPS6KA5O75582 802 aa10.46□□□□□ -0.73
CCDC171-209ENST00000498725 ITGB5P18084 799 aa10.46□□□□□ -0.73
CCDC171-209ENST00000498725 UBE3AQ05086 875 aa10.46□□□□□ -0.73
CCDC171-209ENST00000498725 MTMR1Q13613 665 aa10.46□□□□□ -0.73
CCDC171-209ENST00000498725 PLCB4Q15147 1175 aa10.46□□□□□ -0.73
CCDC171-209ENST00000498725 TICAM2Q86XR7 235 aa10.46□□□□□ -0.73
CCDC171-209ENST00000498725 CMTR1Q8N1G2 835 aaKnown RBP10.46□□□□□ -0.73
CCDC171-209ENST00000498725 GPRASP2Q96D09 838 aa10.46□□□□□ -0.73
CCDC171-209ENST00000498725 RRP36Q96EU6 259 aaKnown RBP10.46□□□□□ -0.73
CCDC171-209ENST00000498725 CDCA3Q99618 268 aaPredicted RBP10.46□□□□□ -0.73
CCDC171-209ENST00000498725 TCF25Q9BQ70 676 aa10.46□□□□□ -0.73
CCDC171-209ENST00000498725 IL25Q9H293 177 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms