RNA–Protein interactions for RNA: ENST00000498595.5

HDLBP-247, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-247ENST00000498595 NID2Q14112 1375 aa16.45■□□□□ 0.22
HDLBP-247ENST00000498595 COL4A4P53420 1690 aaPredicted RBP16.44■□□□□ 0.22
HDLBP-247ENST00000498595 SMIM35A0A1B0GVV1 85 aa16.44■□□□□ 0.22
HDLBP-247ENST00000498595 FAM86B1E9PN63 330 aa16.44■□□□□ 0.22
HDLBP-247ENST00000498595 CPLX1O14810 134 aa16.44■□□□□ 0.22
HDLBP-247ENST00000498595 EPB41L2O43491 1005 aaKnown RBP16.44■□□□□ 0.22
HDLBP-247ENST00000498595 ATG7O95352 703 aa16.44■□□□□ 0.22
HDLBP-247ENST00000498595 FAM86B2P0C5J1 330 aa16.44■□□□□ 0.22
HDLBP-247ENST00000498595 CD52P31358 61 aa16.44■□□□□ 0.22
HDLBP-247ENST00000498595 CTNNB1P35222 781 aa16.44■□□□□ 0.22
HDLBP-247ENST00000498595 TMEM62Q0P6H9 643 aa16.44■□□□□ 0.22
HDLBP-247ENST00000498595 MTHFD1LQ6UB35 978 aa16.44■□□□□ 0.22
HDLBP-247ENST00000498595 ATP8B4Q8TF62 1192 aa16.44■□□□□ 0.22
HDLBP-247ENST00000498595 TRAPPC12Q8WVT3 735 aa16.44■□□□□ 0.22
HDLBP-247ENST00000498595 CYP46A1Q9Y6A2 500 aa16.44■□□□□ 0.22
HDLBP-247ENST00000498595 COL1A2P08123 1366 aa16.43■□□□□ 0.22
HDLBP-247ENST00000498595 H3BNC9 293 aa16.43■□□□□ 0.22
HDLBP-247ENST00000498595 ENPP3O14638 875 aa16.43■□□□□ 0.22
HDLBP-247ENST00000498595 CCNE2O96020 404 aa16.43■□□□□ 0.22
HDLBP-247ENST00000498595 RB1P06400 928 aa16.43■□□□□ 0.22
HDLBP-247ENST00000498595 STAG3L1P0CL83 205 aa16.43■□□□□ 0.22
HDLBP-247ENST00000498595 IFNAR1P17181 557 aa16.43■□□□□ 0.22
HDLBP-247ENST00000498595 KRT76Q01546 638 aa16.43■□□□□ 0.22
HDLBP-247ENST00000498595 BTG3Q14201 252 aaPredicted RBP16.43■□□□□ 0.22
HDLBP-247ENST00000498595 PRR16Q569H4 304 aa16.43■□□□□ 0.22
HDLBP-247ENST00000498595 ZNF484Q5JVG2 852 aa16.43■□□□□ 0.22
HDLBP-247ENST00000498595 ODR4Q5SWX8 454 aa16.43■□□□□ 0.22
HDLBP-247ENST00000498595 ZNF746Q6NUN9 644 aaPredicted RBP16.43■□□□□ 0.22
HDLBP-247ENST00000498595 SWSAP1Q6NVH7 229 aa16.43■□□□□ 0.22
HDLBP-247ENST00000498595 CPLX2Q6PUV4 134 aaKnown RBP16.43■□□□□ 0.22
HDLBP-247ENST00000498595 ABHD15Q6UXT9 468 aa16.43■□□□□ 0.22
HDLBP-247ENST00000498595 FAM43BQ6ZT52 329 aaPredicted RBP16.43■□□□□ 0.22
HDLBP-247ENST00000498595 RUFY3Q7L099 469 aa16.43■□□□□ 0.22
HDLBP-247ENST00000498595 SMAP1Q8IYB5 467 aaPredicted RBP16.43■□□□□ 0.22
HDLBP-247ENST00000498595 ZBTB10Q96DT7 871 aa16.43■□□□□ 0.22
HDLBP-247ENST00000498595 C11orf84Q9BUA3 381 aaPredicted RBP16.43■□□□□ 0.22
HDLBP-247ENST00000498595 AGXT2Q9BYV1 514 aa16.43■□□□□ 0.22
HDLBP-247ENST00000498595 CELF4Q9BZC1 486 aaKnown RBP16.43■□□□□ 0.22
HDLBP-247ENST00000498595 UBE2ZQ9H832 354 aaPredicted RBP16.43■□□□□ 0.22
HDLBP-247ENST00000498595 RNF216Q9NWF9 866 aaPredicted RBP16.43■□□□□ 0.22
HDLBP-247ENST00000498595 GINS2Q9Y248 185 aa16.43■□□□□ 0.22
HDLBP-247ENST00000498595 SAMM50Q9Y512 469 aa16.43■□□□□ 0.22
HDLBP-247ENST00000498595 ADGRA3Q8IWK6 1321 aa16.43■□□□□ 0.22
HDLBP-247ENST00000498595 PRRC2BQ5JSZ5 2229 aaKnown RBP16.42■□□□□ 0.22
HDLBP-247ENST00000498595 MICAL3Q7RTP6 2002 aa16.42■□□□□ 0.22
HDLBP-247ENST00000498595 IGLV3-22A0A075B6J6 115 aa16.42■□□□□ 0.22
HDLBP-247ENST00000498595 IGKV6D-21A0A0A0MT36 114 aa16.42■□□□□ 0.22
HDLBP-247ENST00000498595 RBAK-RBAKDNI3L0D1 243 aa16.42■□□□□ 0.22
HDLBP-247ENST00000498595 PSAPP07602 524 aa16.42■□□□□ 0.22
HDLBP-247ENST00000498595 KLRC1P26715 233 aa16.42■□□□□ 0.22
HDLBP-247ENST00000498595 PDIA3P30101 505 aaKnown RBP16.42■□□□□ 0.22
HDLBP-247ENST00000498595 NLRP5P59047 1200 aa16.42■□□□□ 0.22
HDLBP-247ENST00000498595 CCT2P78371 535 aaKnown RBP16.42■□□□□ 0.22
HDLBP-247ENST00000498595 PKN1Q16512 942 aa16.42■□□□□ 0.22
HDLBP-247ENST00000498595 CCDC60Q8IWA6 550 aaPredicted RBP16.42■□□□□ 0.22
HDLBP-247ENST00000498595 BANK1Q8NDB2 785 aa16.42■□□□□ 0.22
HDLBP-247ENST00000498595 NECAB3Q96P71 396 aaPredicted RBP16.42■□□□□ 0.22
HDLBP-247ENST00000498595 C22orf23Q9BZE7 217 aa16.42■□□□□ 0.22
HDLBP-247ENST00000498595 LRFN2Q9ULH4 789 aa16.42■□□□□ 0.22
HDLBP-247ENST00000498595 PADI3Q9ULW8 664 aa16.42■□□□□ 0.22
HDLBP-247ENST00000498595 CEP131Q9UPN4 1083 aa16.42■□□□□ 0.22
HDLBP-247ENST00000498595 COL4A6Q14031 1691 aa16.42■□□□□ 0.22
HDLBP-247ENST00000498595 TTC28Q96AY4 2481 aa16.42■□□□□ 0.22
HDLBP-247ENST00000498595 SPTBN5Q9NRC6 3674 aaKnown RBP16.42■□□□□ 0.22
HDLBP-247ENST00000498595 IGSF9BQ9UPX0 1349 aa16.42■□□□□ 0.22
HDLBP-247ENST00000498595 SSRP1Q08945 709 aaKnown RBP16.41■□□□□ 0.22
HDLBP-247ENST00000498595 NPAS4Q8IUM7 802 aa16.41■□□□□ 0.22
HDLBP-247ENST00000498595 CRYGNQ8WXF5 182 aa16.41■□□□□ 0.22
HDLBP-247ENST00000498595 BBXQ8WY36 941 aaPredicted RBP16.41■□□□□ 0.22
HDLBP-247ENST00000498595 FAM167AQ96KS9 214 aa16.41■□□□□ 0.22
HDLBP-247ENST00000498595 UIMC1Q96RL1 719 aa16.41■□□□□ 0.22
HDLBP-247ENST00000498595 NSUN3Q9H649 340 aaKnown RBP16.41■□□□□ 0.22
HDLBP-247ENST00000498595 AGO3Q9H9G7 860 aaKnown RBP16.41■□□□□ 0.22
HDLBP-247ENST00000498595 SH3GLB2Q9NR46 395 aa16.41■□□□□ 0.22
HDLBP-247ENST00000498595 VPS54Q9P1Q0 977 aa16.41■□□□□ 0.22
HDLBP-247ENST00000498595 PCDHA10Q9Y5I2 948 aa16.41■□□□□ 0.22
HDLBP-247ENST00000498595 KDM3AQ9Y4C1 1321 aa16.41■□□□□ 0.22
HDLBP-247ENST00000498595 SIP14410 1827 aa16.4■□□□□ 0.22
HDLBP-247ENST00000498595 WDR64B1ANS9 1081 aa16.4■□□□□ 0.22
HDLBP-247ENST00000498595 DHX15O43143 795 aaKnown RBP16.4■□□□□ 0.22
HDLBP-247ENST00000498595 PPFIA3O75145 1194 aa16.4■□□□□ 0.22
HDLBP-247ENST00000498595 KCNA5P22460 613 aa16.4■□□□□ 0.22
HDLBP-247ENST00000498595 BMPR1AP36894 532 aa16.4■□□□□ 0.22
HDLBP-247ENST00000498595 EVCP57679 992 aa16.4■□□□□ 0.22
HDLBP-247ENST00000498595 NFX1Q12986 1120 aaKnown RBP16.4■□□□□ 0.22
HDLBP-247ENST00000498595 EP400NLQ6ZTU2 488 aa16.4■□□□□ 0.22
HDLBP-247ENST00000498595 METTL13Q8N6R0 699 aa16.4■□□□□ 0.22
HDLBP-247ENST00000498595 RASGRP4Q8TDF6 673 aa16.4■□□□□ 0.22
HDLBP-247ENST00000498595 LMAN2LQ9H0V9 348 aa16.4■□□□□ 0.22
HDLBP-247ENST00000498595 NCOA5Q9HCD5 579 aaKnown RBP16.4■□□□□ 0.22
HDLBP-247ENST00000498595 ZSWIM6Q9HCJ5 1215 aa16.4■□□□□ 0.22
HDLBP-247ENST00000498595 KAT6AQ92794 2004 aa16.4■□□□□ 0.22
HDLBP-247ENST00000498595 DENND3A2RUS2 1198 aa16.39■□□□□ 0.21
HDLBP-247ENST00000498595 C5orf67F2Z3F1 127 aa16.39■□□□□ 0.21
HDLBP-247ENST00000498595 NCK2O43639 380 aa16.39■□□□□ 0.21
HDLBP-247ENST00000498595 GAS7O60861 476 aa16.39■□□□□ 0.21
HDLBP-247ENST00000498595 RPS6KA5O75582 802 aa16.39■□□□□ 0.21
HDLBP-247ENST00000498595 DGKIO75912 1065 aa16.39■□□□□ 0.21
HDLBP-247ENST00000498595 IBSPP21815 317 aaPredicted RBP16.39■□□□□ 0.21
HDLBP-247ENST00000498595 CIITAP33076 1130 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms