RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 SEC23AQ15436 765 aa13.41□□□□□ -0.26
CDK9-205ENST00000498339 CYB5R4Q7L1T6 521 aa13.41□□□□□ -0.26
CDK9-205ENST00000498339 ASCL5Q7RTU5 278 aa13.41□□□□□ -0.26
CDK9-205ENST00000498339 RTN4RL1Q86UN2 441 aaPredicted RBP13.41□□□□□ -0.26
CDK9-205ENST00000498339 VN1R2Q8NFZ6 395 aa13.41□□□□□ -0.26
CDK9-205ENST00000498339 SUSD6Q92537 303 aa13.41□□□□□ -0.26
CDK9-205ENST00000498339 CDHR1Q96JP9 859 aa13.41□□□□□ -0.26
CDK9-205ENST00000498339 RIPOR3Q96MK2 946 aa13.41□□□□□ -0.26
CDK9-205ENST00000498339 DSCC1Q9BVC3 393 aa13.41□□□□□ -0.26
CDK9-205ENST00000498339 RIOX1Q9H6W3 641 aa13.41□□□□□ -0.26
CDK9-205ENST00000498339 ENTPD7Q9NQZ7 604 aa13.41□□□□□ -0.26
CDK9-205ENST00000498339 TMEM260Q9NX78 707 aa13.41□□□□□ -0.26
CDK9-205ENST00000498339 GINS2Q9Y248 185 aa13.41□□□□□ -0.26
CDK9-205ENST00000498339 ZFHX2Q9C0A1 2572 aaPredicted RBP13.4□□□□□ -0.26
CDK9-205ENST00000498339 DENND3A2RUS2 1198 aa13.4□□□□□ -0.26
CDK9-205ENST00000498339 RRN3P2A6NIE6 340 aa13.4□□□□□ -0.26
CDK9-205ENST00000498339 HIP1O00291 1037 aa13.4□□□□□ -0.26
CDK9-205ENST00000498339 IFIT3O14879 490 aaKnown RBP13.4□□□□□ -0.26
CDK9-205ENST00000498339 CYTH3O43739 400 aa13.4□□□□□ -0.26
CDK9-205ENST00000498339 SARSP49591 514 aaKnown RBP13.4□□□□□ -0.26
CDK9-205ENST00000498339 MTMR3Q13615 1198 aa13.4□□□□□ -0.26
CDK9-205ENST00000498339 TMEM266Q2M3C6 531 aa13.4□□□□□ -0.26
CDK9-205ENST00000498339 SLC35G1Q2M3R5 365 aa13.4□□□□□ -0.26
CDK9-205ENST00000498339 MARCH8Q5T0T0 291 aa13.4□□□□□ -0.26
CDK9-205ENST00000498339 XRRA1Q6P2D8 792 aa13.4□□□□□ -0.26
CDK9-205ENST00000498339 USP17L6PQ6QN14 398 aa13.4□□□□□ -0.26
CDK9-205ENST00000498339 KREMEN2Q8NCW0 462 aa13.4□□□□□ -0.26
CDK9-205ENST00000498339 MFSD1Q9H3U5 465 aa13.4□□□□□ -0.26
CDK9-205ENST00000498339 AZI2Q9H6S1 392 aa13.4□□□□□ -0.26
CDK9-205ENST00000498339 SEC63Q9UGP8 760 aaKnown RBP13.4□□□□□ -0.26
CDK9-205ENST00000498339 NR2E1Q9Y466 385 aa13.4□□□□□ -0.26
CDK9-205ENST00000498339 DCHS1Q96JQ0 3298 aa13.4□□□□□ -0.26
CDK9-205ENST00000498339 IGSF9BQ9UPX0 1349 aa13.39□□□□□ -0.27
CDK9-205ENST00000498339 CACNA1HO95180 2353 aa13.39□□□□□ -0.27
CDK9-205ENST00000498339 GSTTP1A0A1W2PQM5 241 aa13.39□□□□□ -0.27
CDK9-205ENST00000498339 PRR23AA6NEV1 266 aa13.39□□□□□ -0.27
CDK9-205ENST00000498339 ATP9AO75110 1047 aa13.39□□□□□ -0.27
CDK9-205ENST00000498339 INSRRP14616 1297 aa13.39□□□□□ -0.27
CDK9-205ENST00000498339 KCNA2P16389 499 aa13.39□□□□□ -0.27
CDK9-205ENST00000498339 NUBP1P53384 320 aa13.39□□□□□ -0.27
CDK9-205ENST00000498339 APOBRQ0VD83 1088 aa13.39□□□□□ -0.27
CDK9-205ENST00000498339 MTMR1Q13613 665 aa13.39□□□□□ -0.27
CDK9-205ENST00000498339 WTAPQ15007 396 aa13.39□□□□□ -0.27
CDK9-205ENST00000498339 SART3Q15020 963 aaKnown RBP13.39□□□□□ -0.27
CDK9-205ENST00000498339 DIEXFQ68CQ4 756 aaKnown RBP13.39□□□□□ -0.27
CDK9-205ENST00000498339 PDE12Q6L8Q7 609 aaKnown RBP13.39□□□□□ -0.27
CDK9-205ENST00000498339 ANKRD54Q6NXT1 300 aa13.39□□□□□ -0.27
CDK9-205ENST00000498339 ATP8B4Q8TF62 1192 aa13.39□□□□□ -0.27
CDK9-205ENST00000498339 TRAPPC12Q8WVT3 735 aa13.39□□□□□ -0.27
CDK9-205ENST00000498339 TNPO1Q92973 898 aaKnown RBP13.39□□□□□ -0.27
CDK9-205ENST00000498339 GPRASP2Q96D09 838 aa13.39□□□□□ -0.27
CDK9-205ENST00000498339 CELF4Q9BZC1 486 aaKnown RBP13.39□□□□□ -0.27
CDK9-205ENST00000498339 RNF216Q9NWF9 866 aaPredicted RBP13.39□□□□□ -0.27
CDK9-205ENST00000498339 SQORQ9Y6N5 450 aa13.39□□□□□ -0.27
CDK9-205ENST00000498339 CA8P35219 290 aa13.38□□□□□ -0.27
CDK9-205ENST00000498339 ERVFC1P60507 584 aa13.38□□□□□ -0.27
CDK9-205ENST00000498339 KRT76Q01546 638 aa13.38□□□□□ -0.27
CDK9-205ENST00000498339 B4GALNT3Q6L9W6 998 aa13.38□□□□□ -0.27
CDK9-205ENST00000498339 CATIPQ7Z7H3 387 aa13.38□□□□□ -0.27
CDK9-205ENST00000498339 RALYLQ86SE5 291 aaKnown RBP13.38□□□□□ -0.27
CDK9-205ENST00000498339 CRIPAKQ8N1N5 446 aa13.38□□□□□ -0.27
CDK9-205ENST00000498339 COLGALT1Q8NBJ5 622 aa13.38□□□□□ -0.27
CDK9-205ENST00000498339 RRP36Q96EU6 259 aaKnown RBP13.38□□□□□ -0.27
CDK9-205ENST00000498339 TCF25Q9BQ70 676 aa13.38□□□□□ -0.27
CDK9-205ENST00000498339 TMX1Q9H3N1 280 aa13.38□□□□□ -0.27
CDK9-205ENST00000498339 JPH1Q9HDC5 661 aaPredicted RBP13.38□□□□□ -0.27
CDK9-205ENST00000498339 HCSTQ9UBK5 93 aa13.38□□□□□ -0.27
CDK9-205ENST00000498339 PUF60Q9UHX1 559 aaKnown RBP13.38□□□□□ -0.27
CDK9-205ENST00000498339 SORCS3Q9UPU3 1222 aa13.38□□□□□ -0.27
CDK9-205ENST00000498339 PTPRZ1P23471 2315 aaPredicted RBP13.38□□□□□ -0.27
CDK9-205ENST00000498339 SPTBN4Q9H254 2564 aa13.37□□□□□ -0.27
CDK9-205ENST00000498339 PROB1E7EW31 1015 aa13.37□□□□□ -0.27
CDK9-205ENST00000498339 LAG3P18627 525 aa13.37□□□□□ -0.27
CDK9-205ENST00000498339 CES5AQ6NT32 575 aa13.37□□□□□ -0.27
CDK9-205ENST00000498339 UBALD2Q8IYN6 164 aa13.37□□□□□ -0.27
CDK9-205ENST00000498339 TMEM105Q8N8V8 129 aa13.37□□□□□ -0.27
CDK9-205ENST00000498339 NKD2Q969F2 451 aaPredicted RBP13.37□□□□□ -0.27
CDK9-205ENST00000498339 C1orf112Q9NSG2 853 aa13.37□□□□□ -0.27
CDK9-205ENST00000498339 TYW1Q9NV66 732 aaKnown RBP13.37□□□□□ -0.27
CDK9-205ENST00000498339 PCDHA2Q9Y5H9 948 aa13.37□□□□□ -0.27
CDK9-205ENST00000498339 MYH9P35579 1960 aaKnown RBP13.37□□□□□ -0.27
CDK9-205ENST00000498339 PIK3CDO00329 1044 aa13.36□□□□□ -0.27
CDK9-205ENST00000498339 MEIS2O14770 477 aa13.36□□□□□ -0.27
CDK9-205ENST00000498339 FSCN2O14926 492 aa13.36□□□□□ -0.27
CDK9-205ENST00000498339 MGEA5O60502 916 aa13.36□□□□□ -0.27
CDK9-205ENST00000498339 RPS6KA5O75582 802 aa13.36□□□□□ -0.27
CDK9-205ENST00000498339 BRD1O95696 1058 aa13.36□□□□□ -0.27
CDK9-205ENST00000498339 FGFR1P11362 822 aa13.36□□□□□ -0.27
CDK9-205ENST00000498339 ITGB5P18084 799 aa13.36□□□□□ -0.27
CDK9-205ENST00000498339 NBL1P41271 181 aa13.36□□□□□ -0.27
CDK9-205ENST00000498339 ID4P47928 161 aa13.36□□□□□ -0.27
CDK9-205ENST00000498339 HDAC1Q13547 482 aaPredicted RBP13.36□□□□□ -0.27
CDK9-205ENST00000498339 PLCB4Q15147 1175 aa13.36□□□□□ -0.27
CDK9-205ENST00000498339 TPRNQ4KMQ1 711 aa13.36□□□□□ -0.27
CDK9-205ENST00000498339 ODR4Q5SWX8 454 aa13.36□□□□□ -0.27
CDK9-205ENST00000498339 FAM102BQ5T8I3 360 aa13.36□□□□□ -0.27
CDK9-205ENST00000498339 MCTP2Q6DN12 878 aa13.36□□□□□ -0.27
CDK9-205ENST00000498339 SYCE2Q6PIF2 218 aa13.36□□□□□ -0.27
CDK9-205ENST00000498339 ERMP1Q7Z2K6 904 aa13.36□□□□□ -0.27
CDK9-205ENST00000498339 FRMD5Q7Z6J6 570 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms