RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 SGPL1O95470 568 aa15.18■□□□□ 0.02
CPNE1-227ENST00000498056 SPATA31C1P0DKV0 1188 aa15.18■□□□□ 0.02
CPNE1-227ENST00000498056 STAT6P42226 847 aa15.18■□□□□ 0.02
CPNE1-227ENST00000498056 GJA8P48165 433 aa15.18■□□□□ 0.02
CPNE1-227ENST00000498056 PSMC6P62333 389 aa15.18■□□□□ 0.02
CPNE1-227ENST00000498056 NKX3-2P78367 333 aa15.18■□□□□ 0.02
CPNE1-227ENST00000498056 GRB10Q13322 594 aa15.18■□□□□ 0.02
CPNE1-227ENST00000498056 MFSD10Q14728 455 aa15.18■□□□□ 0.02
CPNE1-227ENST00000498056 PLA2G4FQ68DD2 849 aa15.18■□□□□ 0.02
CPNE1-227ENST00000498056 PPP1R13LQ8WUF5 828 aa15.18■□□□□ 0.02
CPNE1-227ENST00000498056 FAM167AQ96KS9 214 aa15.18■□□□□ 0.02
CPNE1-227ENST00000498056 C16orf70Q9BSU1 422 aa15.18■□□□□ 0.02
CPNE1-227ENST00000498056 POLR3CQ9BUI4 534 aaPredicted RBP15.18■□□□□ 0.02
CPNE1-227ENST00000498056 CCSER1Q9C0I3 900 aa15.18■□□□□ 0.02
CPNE1-227ENST00000498056 NT5C3AQ9H0P0 336 aa15.18■□□□□ 0.02
CPNE1-227ENST00000498056 GOLPH3LQ9H4A5 285 aa15.18■□□□□ 0.02
CPNE1-227ENST00000498056 TUT1Q9H6E5 874 aaKnown RBP15.18■□□□□ 0.02
CPNE1-227ENST00000498056 ZSWIM4Q9H7M6 989 aa15.18■□□□□ 0.02
CPNE1-227ENST00000498056 KIAA1024Q9UPX6 916 aa15.18■□□□□ 0.02
CPNE1-227ENST00000498056 A0A087X0B3 334 aa15.17■□□□□ 0.02
CPNE1-227ENST00000498056 A0A1W2PQ45 241 aaPredicted RBP15.17■□□□□ 0.02
CPNE1-227ENST00000498056 A0A1W2PQY0 241 aa15.17■□□□□ 0.02
CPNE1-227ENST00000498056 TMEM150BA6NC51 233 aa15.17■□□□□ 0.02
CPNE1-227ENST00000498056 ZNF862O60290 1169 aa15.17■□□□□ 0.02
CPNE1-227ENST00000498056 CMA1P23946 247 aa15.17■□□□□ 0.02
CPNE1-227ENST00000498056 PSEN2P49810 448 aa15.17■□□□□ 0.02
CPNE1-227ENST00000498056 SLC26A2P50443 739 aa15.17■□□□□ 0.02
CPNE1-227ENST00000498056 UBE2HP62256 183 aa15.17■□□□□ 0.02
CPNE1-227ENST00000498056 ECM1Q16610 540 aa15.17■□□□□ 0.02
CPNE1-227ENST00000498056 KIAA0753Q2KHM9 967 aa15.17■□□□□ 0.02
CPNE1-227ENST00000498056 TMEM119Q4V9L6 283 aa15.17■□□□□ 0.02
CPNE1-227ENST00000498056 CCSAPQ6IQ19 270 aaPredicted RBP15.17■□□□□ 0.02
CPNE1-227ENST00000498056 PLPPR4Q7Z2D5 763 aa15.17■□□□□ 0.02
CPNE1-227ENST00000498056 DHX58Q96C10 678 aa15.17■□□□□ 0.02
CPNE1-227ENST00000498056 GLT1D1Q96MS3 346 aa15.17■□□□□ 0.02
CPNE1-227ENST00000498056 PNMA5Q96PV4 448 aa15.17■□□□□ 0.02
CPNE1-227ENST00000498056 HSD17B14Q9BPX1 270 aa15.17■□□□□ 0.02
CPNE1-227ENST00000498056 CRISPLD2Q9H0B8 497 aa15.17■□□□□ 0.02
CPNE1-227ENST00000498056 MAFBQ9Y5Q3 323 aaPredicted RBP15.17■□□□□ 0.02
CPNE1-227ENST00000498056 DDX11L8A8MPP1 907 aa15.16■□□□□ 0.02
CPNE1-227ENST00000498056 SLC26A4O43511 780 aa15.16■□□□□ 0.02
CPNE1-227ENST00000498056 SLITRK3O94933 977 aa15.16■□□□□ 0.02
CPNE1-227ENST00000498056 SSBP05455 408 aaKnown RBP eCLIP15.16■□□□□ 0.02
CPNE1-227ENST00000498056 YWHABP31946 246 aaKnown RBP15.16■□□□□ 0.02
CPNE1-227ENST00000498056 PLCB4Q15147 1175 aa15.16■□□□□ 0.02
CPNE1-227ENST00000498056 MTERF2Q49AM1 385 aa15.16■□□□□ 0.02
CPNE1-227ENST00000498056 FAM47CQ5HY64 1035 aa15.16■□□□□ 0.02
CPNE1-227ENST00000498056 HYIQ5T013 277 aa15.16■□□□□ 0.02
CPNE1-227ENST00000498056 C4orf19Q8IY42 314 aa15.16■□□□□ 0.02
CPNE1-227ENST00000498056 PIGOQ8TEQ8 1089 aa15.16■□□□□ 0.02
CPNE1-227ENST00000498056 DIS3LQ8TF46 1054 aaKnown RBP15.16■□□□□ 0.02
CPNE1-227ENST00000498056 ATP8B4Q8TF62 1192 aa15.16■□□□□ 0.02
CPNE1-227ENST00000498056 KAT2BQ92831 832 aa15.16■□□□□ 0.02
CPNE1-227ENST00000498056 VTI1AQ96AJ9 217 aa15.16■□□□□ 0.02
CPNE1-227ENST00000498056 TSEN34Q9BSV6 310 aaKnown RBP15.16■□□□□ 0.02
CPNE1-227ENST00000498056 PANK2Q9BZ23 570 aa15.16■□□□□ 0.02
CPNE1-227ENST00000498056 STARD7Q9NQZ5 370 aa15.16■□□□□ 0.02
CPNE1-227ENST00000498056 BMP2KQ9NSY1 1161 aaPredicted RBP15.16■□□□□ 0.02
CPNE1-227ENST00000498056 KCNH3Q9ULD8 1083 aa15.16■□□□□ 0.02
CPNE1-227ENST00000498056 PHF24Q9UPV7 400 aa15.16■□□□□ 0.02
CPNE1-227ENST00000498056 A0A087WWV3 80 aa15.15■□□□□ 0.02
CPNE1-227ENST00000498056 E9PMD0 336 aa15.15■□□□□ 0.02
CPNE1-227ENST00000498056 POLR2DO15514 142 aaKnown RBP15.15■□□□□ 0.02
CPNE1-227ENST00000498056 CABYRO75952 493 aa15.15■□□□□ 0.02
CPNE1-227ENST00000498056 ATP4AP20648 1035 aa15.15■□□□□ 0.02
CPNE1-227ENST00000498056 MUTP22033 750 aa15.15■□□□□ 0.02
CPNE1-227ENST00000498056 MCM4P33991 863 aa15.15■□□□□ 0.02
CPNE1-227ENST00000498056 SYKP43405 635 aa15.15■□□□□ 0.02
CPNE1-227ENST00000498056 NDUFA8P51970 172 aa15.15■□□□□ 0.02
CPNE1-227ENST00000498056 IGBP1P78318 339 aa15.15■□□□□ 0.02
CPNE1-227ENST00000498056 PPFIA1Q13136 1202 aa15.15■□□□□ 0.02
CPNE1-227ENST00000498056 XKR3Q5GH77 459 aa15.15■□□□□ 0.02
CPNE1-227ENST00000498056 RRAGBQ5VZM2 374 aa15.15■□□□□ 0.02
CPNE1-227ENST00000498056 KCNK18Q7Z418 384 aa15.15■□□□□ 0.02
CPNE1-227ENST00000498056 BBXQ8WY36 941 aaPredicted RBP15.15■□□□□ 0.02
CPNE1-227ENST00000498056 ABHD8Q96I13 439 aa15.15■□□□□ 0.02
CPNE1-227ENST00000498056 SH2D3AQ9BRG2 576 aa15.15■□□□□ 0.02
CPNE1-227ENST00000498056 LMBRD1Q9NUN5 540 aa15.15■□□□□ 0.02
CPNE1-227ENST00000498056 STK17AQ9UEE5 414 aa15.15■□□□□ 0.02
CPNE1-227ENST00000498056 COL1A2P08123 1366 aa15.14■□□□□ 0.01
CPNE1-227ENST00000498056 ARHGEF35A5YM69 484 aa15.14■□□□□ 0.01
CPNE1-227ENST00000498056 LYPLA2O95372 231 aa15.14■□□□□ 0.01
CPNE1-227ENST00000498056 SMIM10L2AP0DMW4 78 aa15.14■□□□□ 0.01
CPNE1-227ENST00000498056 SMIM10L2BP0DMW5 78 aa15.14■□□□□ 0.01
CPNE1-227ENST00000498056 FAM160A1Q05DH4 1040 aa15.14■□□□□ 0.01
CPNE1-227ENST00000498056 DHX8Q14562 1220 aaKnown RBP15.14■□□□□ 0.01
CPNE1-227ENST00000498056 XKR9Q5GH70 373 aa15.14■□□□□ 0.01
CPNE1-227ENST00000498056 ANO5Q75V66 913 aa15.14■□□□□ 0.01
CPNE1-227ENST00000498056 TNS4Q8IZW8 715 aa15.14■□□□□ 0.01
CPNE1-227ENST00000498056 C7orf31Q8N865 590 aa15.14■□□□□ 0.01
CPNE1-227ENST00000498056 ANKLE1Q8NAG6 615 aa15.14■□□□□ 0.01
CPNE1-227ENST00000498056 LRRC15Q8TF66 581 aa15.14■□□□□ 0.01
CPNE1-227ENST00000498056 TRAPPC12Q8WVT3 735 aa15.14■□□□□ 0.01
CPNE1-227ENST00000498056 NACC1Q96RE7 527 aa15.14■□□□□ 0.01
CPNE1-227ENST00000498056 PYM1Q9BRP8 204 aaKnown RBP15.14■□□□□ 0.01
CPNE1-227ENST00000498056 BHMT2Q9H2M3 363 aa15.14■□□□□ 0.01
CPNE1-227ENST00000498056 RNPEPQ9H4A4 650 aa15.14■□□□□ 0.01
CPNE1-227ENST00000498056 DNM3Q9UQ16 869 aa15.14■□□□□ 0.01
CPNE1-227ENST00000498056 HPSEQ9Y251 543 aa15.14■□□□□ 0.01
CPNE1-227ENST00000498056 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms