RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 RABGAP1Q9Y3P9 1069 aa8.76□□□□□ -1.01
HLA-DMB-262ENST00000498020 MYH7P12883 1935 aa8.76□□□□□ -1.01
HLA-DMB-262ENST00000498020 ARHGEF35A5YM69 484 aa8.76□□□□□ -1.01
HLA-DMB-262ENST00000498020 TBX3O15119 743 aa8.76□□□□□ -1.01
HLA-DMB-262ENST00000498020 RARBP10826 455 aa8.76□□□□□ -1.01
HLA-DMB-262ENST00000498020 ERCC3P19447 782 aa8.76□□□□□ -1.01
HLA-DMB-262ENST00000498020 TMOD1P28289 359 aa8.76□□□□□ -1.01
HLA-DMB-262ENST00000498020 ARID5AQ03989 594 aa8.76□□□□□ -1.01
HLA-DMB-262ENST00000498020 NAA30Q147X3 362 aaPredicted RBP8.76□□□□□ -1.01
HLA-DMB-262ENST00000498020 PPP2R3CQ969Q6 453 aa8.76□□□□□ -1.01
HLA-DMB-262ENST00000498020 MMP19Q99542 508 aa8.76□□□□□ -1.01
HLA-DMB-262ENST00000498020 RHOXF2BP0C7M4 288 aa8.76□□□□□ -1.01
HLA-DMB-262ENST00000498020 INPP5BP32019 993 aa8.76□□□□□ -1.01
HLA-DMB-262ENST00000498020 ARPP19P56211 112 aa8.76□□□□□ -1.01
HLA-DMB-262ENST00000498020 CYP4A11Q02928 519 aa8.76□□□□□ -1.01
HLA-DMB-262ENST00000498020 COASYQ13057 564 aa8.76□□□□□ -1.01
HLA-DMB-262ENST00000498020 GRB10Q13322 594 aa8.76□□□□□ -1.01
HLA-DMB-262ENST00000498020 DCAF17Q5H9S7 520 aaPredicted RBP8.76□□□□□ -1.01
HLA-DMB-262ENST00000498020 FAM83BQ5T0W9 1011 aa8.76□□□□□ -1.01
HLA-DMB-262ENST00000498020 RAD9BQ6WBX8 426 aa8.76□□□□□ -1.01
HLA-DMB-262ENST00000498020 SESTD1Q86VW0 696 aa8.76□□□□□ -1.01
HLA-DMB-262ENST00000498020 MYCT1Q8N699 235 aa8.76□□□□□ -1.01
HLA-DMB-262ENST00000498020 GPRC5AQ8NFJ5 357 aa8.76□□□□□ -1.01
HLA-DMB-262ENST00000498020 RBM46Q8TBY0 533 aaKnown RBP8.76□□□□□ -1.01
HLA-DMB-262ENST00000498020 CEP63Q96MT8 703 aa8.76□□□□□ -1.01
HLA-DMB-262ENST00000498020 RHOXF2Q9BQY4 288 aa8.76□□□□□ -1.01
HLA-DMB-262ENST00000498020 WDR11Q9BZH6 1224 aa8.76□□□□□ -1.01
HLA-DMB-262ENST00000498020 ZMYND15Q9H091 742 aa8.76□□□□□ -1.01
HLA-DMB-262ENST00000498020 HSD3B7Q9H2F3 369 aa8.76□□□□□ -1.01
HLA-DMB-262ENST00000498020 NLRC4Q9NPP4 1024 aa8.76□□□□□ -1.01
HLA-DMB-262ENST00000498020 AKT3Q9Y243 479 aa8.76□□□□□ -1.01
HLA-DMB-262ENST00000498020 GAP43P17677 238 aa8.76□□□□□ -1.01
HLA-DMB-262ENST00000498020 BIRC2Q13490 618 aa8.76□□□□□ -1.01
HLA-DMB-262ENST00000498020 ASIC2Q16515 512 aa8.76□□□□□ -1.01
HLA-DMB-262ENST00000498020 LRCH2Q5VUJ6 765 aa8.76□□□□□ -1.01
HLA-DMB-262ENST00000498020 TTI2Q6NXR4 508 aa8.76□□□□□ -1.01
HLA-DMB-262ENST00000498020 HOMEZQ8IX15 550 aa8.76□□□□□ -1.01
HLA-DMB-262ENST00000498020 ZNF280CQ8ND82 737 aa8.76□□□□□ -1.01
HLA-DMB-262ENST00000498020 LSM14BQ9BX40 385 aaKnown RBP8.76□□□□□ -1.01
HLA-DMB-262ENST00000498020 DCDC2CA8MYV0 355 aa8.75□□□□□ -1.01
HLA-DMB-262ENST00000498020 E9PMD0 336 aa8.75□□□□□ -1.01
HLA-DMB-262ENST00000498020 ATP8B1O43520 1251 aa8.75□□□□□ -1.01
HLA-DMB-262ENST00000498020 SLC37A4O43826 429 aa8.75□□□□□ -1.01
HLA-DMB-262ENST00000498020 ZSCAN20P17040 1043 aaPredicted RBP8.75□□□□□ -1.01
HLA-DMB-262ENST00000498020 FBXO38Q6PIJ6 1188 aa8.75□□□□□ -1.01
HLA-DMB-262ENST00000498020 MOXD1Q6UVY6 613 aa8.75□□□□□ -1.01
HLA-DMB-262ENST00000498020 MCF2L2Q86YR7 1114 aa8.75□□□□□ -1.01
HLA-DMB-262ENST00000498020 TBC1D5Q92609 795 aa8.75□□□□□ -1.01
HLA-DMB-262ENST00000498020 CAPZA3Q96KX2 299 aa8.75□□□□□ -1.01
HLA-DMB-262ENST00000498020 NOX5Q96PH1 765 aa8.75□□□□□ -1.01
HLA-DMB-262ENST00000498020 WDR24Q96S15 920 aa8.75□□□□□ -1.01
HLA-DMB-262ENST00000498020 FRMD4BQ9Y2L6 1034 aa8.75□□□□□ -1.01
HLA-DMB-262ENST00000498020 COMMD10Q9Y6G5 202 aa8.75□□□□□ -1.01
HLA-DMB-262ENST00000498020 HSPA1AP0DMV8 641 aaKnown RBP8.75□□□□□ -1.01
HLA-DMB-262ENST00000498020 HSPA1BP0DMV9 641 aaKnown RBP8.75□□□□□ -1.01
HLA-DMB-262ENST00000498020 XRCC5P13010 732 aaKnown RBP8.75□□□□□ -1.01
HLA-DMB-262ENST00000498020 KLHL30Q0D2K2 578 aa8.75□□□□□ -1.01
HLA-DMB-262ENST00000498020 NAALADL2Q58DX5 795 aa8.75□□□□□ -1.01
HLA-DMB-262ENST00000498020 TTC30AQ86WT1 665 aa8.75□□□□□ -1.01
HLA-DMB-262ENST00000498020 CCDC117Q8IWD4 279 aaPredicted RBP8.75□□□□□ -1.01
HLA-DMB-262ENST00000498020 SHISA4Q96DD7 197 aa8.75□□□□□ -1.01
HLA-DMB-262ENST00000498020 TEKT3Q9BXF9 490 aa8.75□□□□□ -1.01
HLA-DMB-262ENST00000498020 NHEJ1Q9H9Q4 299 aaPredicted RBP8.75□□□□□ -1.01
HLA-DMB-262ENST00000498020 MYH14Q7Z406 1995 aaKnown RBP8.75□□□□□ -1.01
HLA-DMB-262ENST00000498020 TIAM2Q8IVF5 1701 aa8.75□□□□□ -1.01
HLA-DMB-262ENST00000498020 POTEB3A0JP26 581 aa8.75□□□□□ -1.01
HLA-DMB-262ENST00000498020 POTECB2RU33 542 aa8.75□□□□□ -1.01
HLA-DMB-262ENST00000498020 POLR3GO15318 223 aaPredicted RBP8.75□□□□□ -1.01
HLA-DMB-262ENST00000498020 PQBP1O60828 265 aaKnown RBP8.75□□□□□ -1.01
HLA-DMB-262ENST00000498020 NR2F2P24468 414 aa8.75□□□□□ -1.01
HLA-DMB-262ENST00000498020 HOXA13P31271 388 aaPredicted RBP8.75□□□□□ -1.01
HLA-DMB-262ENST00000498020 GABPB1Q06547 395 aaPredicted RBP8.75□□□□□ -1.01
HLA-DMB-262ENST00000498020 DACT2Q5SW24 774 aa8.75□□□□□ -1.01
HLA-DMB-262ENST00000498020 POTEBQ6S5H4 581 aa8.75□□□□□ -1.01
HLA-DMB-262ENST00000498020 C7orf31Q8N865 590 aa8.75□□□□□ -1.01
HLA-DMB-262ENST00000498020 EDEM3Q9BZQ6 932 aa8.75□□□□□ -1.01
HLA-DMB-262ENST00000498020 DDTLA6NHG4 134 aaPredicted RBP8.75□□□□□ -1.01
HLA-DMB-262ENST00000498020 SNHG28P0DPA3 235 aa8.75□□□□□ -1.01
HLA-DMB-262ENST00000498020 KIAA0753Q2KHM9 967 aa8.75□□□□□ -1.01
HLA-DMB-262ENST00000498020 HDXQ7Z353 690 aa8.75□□□□□ -1.01
HLA-DMB-262ENST00000498020 FAM161BQ96MY7 647 aa8.75□□□□□ -1.01
HLA-DMB-262ENST00000498020 IMPG2Q9BZV3 1241 aa8.75□□□□□ -1.01
HLA-DMB-262ENST00000498020 RPAP3Q9H6T3 665 aaPredicted RBP8.75□□□□□ -1.01
HLA-DMB-262ENST00000498020 KCNQ5Q9NR82 932 aa8.75□□□□□ -1.01
HLA-DMB-262ENST00000498020 RNF216Q9NWF9 866 aaPredicted RBP8.75□□□□□ -1.01
HLA-DMB-262ENST00000498020 INPP5FQ9Y2H2 1132 aa8.75□□□□□ -1.01
HLA-DMB-262ENST00000498020 NUB1Q9Y5A7 615 aa8.75□□□□□ -1.01
HLA-DMB-262ENST00000498020 PCDHB13Q9Y5F0 798 aa8.75□□□□□ -1.01
HLA-DMB-262ENST00000498020 AOC2O75106 756 aa8.74□□□□□ -1.01
HLA-DMB-262ENST00000498020 NPM3O75607 178 aaKnown RBP8.74□□□□□ -1.01
HLA-DMB-262ENST00000498020 LMBR1Q8WVP7 490 aa8.74□□□□□ -1.01
HLA-DMB-262ENST00000498020 FAM151AQ8WW52 585 aa8.74□□□□□ -1.01
HLA-DMB-262ENST00000498020 BBXQ8WY36 941 aaPredicted RBP8.74□□□□□ -1.01
HLA-DMB-262ENST00000498020 MKL1Q969V6 931 aa8.74□□□□□ -1.01
HLA-DMB-262ENST00000498020 MTMR9Q96QG7 549 aa8.74□□□□□ -1.01
HLA-DMB-262ENST00000498020 PPP1R12CQ9BZL4 782 aa8.74□□□□□ -1.01
HLA-DMB-262ENST00000498020 MRFAP1Q9Y605 127 aa8.74□□□□□ -1.01
HLA-DMB-262ENST00000498020 PLIN4Q96Q06 1357 aa8.74□□□□□ -1.01
HLA-DMB-262ENST00000498020 TADA3O75528 432 aa8.74□□□□□ -1.01
HLA-DMB-262ENST00000498020 POLR2FP61218 127 aaKnown RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms