RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 ARHGAP28Q9P2N2 729 aa6.31□□□□□ -1.4
SMC4-227ENST00000497984 CBLCQ9ULV8 474 aa6.31□□□□□ -1.4
SMC4-227ENST00000497984 PCDHA8Q9Y5H6 950 aa6.31□□□□□ -1.4
SMC4-227ENST00000497984 ATP23Q9Y6H3 246 aa6.31□□□□□ -1.4
SMC4-227ENST00000497984 ARVCFO00192 962 aa6.3□□□□□ -1.4
SMC4-227ENST00000497984 C4BPAP04003 597 aaKnown RBP6.3□□□□□ -1.4
SMC4-227ENST00000497984 PYGMP11217 842 aa6.3□□□□□ -1.4
SMC4-227ENST00000497984 PDE6AP16499 860 aa6.3□□□□□ -1.4
SMC4-227ENST00000497984 AOAHP28039 575 aa6.3□□□□□ -1.4
SMC4-227ENST00000497984 STILQ15468 1287 aa6.3□□□□□ -1.4
SMC4-227ENST00000497984 FOXB2Q5VYV0 432 aa6.3□□□□□ -1.4
SMC4-227ENST00000497984 C16orf59Q7L2K0 433 aa6.3□□□□□ -1.4
SMC4-227ENST00000497984 MTDHQ86UE4 582 aaKnown RBP6.3□□□□□ -1.4
SMC4-227ENST00000497984 PTRH1Q86Y79 214 aaKnown RBP6.3□□□□□ -1.4
SMC4-227ENST00000497984 SCUBE1Q8IWY4 988 aa6.3□□□□□ -1.4
SMC4-227ENST00000497984 HOMEZQ8IX15 550 aa6.3□□□□□ -1.4
SMC4-227ENST00000497984 CFHR4Q92496 578 aa6.3□□□□□ -1.4
SMC4-227ENST00000497984 PTPRN2Q92932 1015 aa6.3□□□□□ -1.4
SMC4-227ENST00000497984 PLA2G12BQ9BX93 195 aa6.3□□□□□ -1.4
SMC4-227ENST00000497984 INCENPQ9NQS7 918 aa6.3□□□□□ -1.4
SMC4-227ENST00000497984 GALNT8Q9NY28 637 aa6.3□□□□□ -1.4
SMC4-227ENST00000497984 NR2E1Q9Y466 385 aa6.3□□□□□ -1.4
SMC4-227ENST00000497984 ZNF561-AS1K7EIQ3 104 aa6.29□□□□□ -1.4
SMC4-227ENST00000497984 ARHGAP6O43182 974 aa6.29□□□□□ -1.4
SMC4-227ENST00000497984 CDC14BO60729 498 aa6.29□□□□□ -1.4
SMC4-227ENST00000497984 MPIG6BO95866 241 aa6.29□□□□□ -1.4
SMC4-227ENST00000497984 MC4RP32245 332 aa6.29□□□□□ -1.4
SMC4-227ENST00000497984 GJA4P35212 333 aa6.29□□□□□ -1.4
SMC4-227ENST00000497984 JAM2P57087 298 aa6.29□□□□□ -1.4
SMC4-227ENST00000497984 FHL2Q14192 279 aa6.29□□□□□ -1.4
SMC4-227ENST00000497984 CXXC5Q7LFL8 322 aaKnown RBP6.29□□□□□ -1.4
SMC4-227ENST00000497984 WNK4Q96J92 1243 aa6.29□□□□□ -1.4
SMC4-227ENST00000497984 OR14A2Q96R54 314 aa6.29□□□□□ -1.4
SMC4-227ENST00000497984 KIAA1683Q9H0B3 1180 aa6.29□□□□□ -1.4
SMC4-227ENST00000497984 TRBV23-1A0A0A0MS06 115 aa6.28□□□□□ -1.4
SMC4-227ENST00000497984 NARSO43776 548 aaKnown RBP6.28□□□□□ -1.4
SMC4-227ENST00000497984 HMGCRP04035 888 aa6.28□□□□□ -1.4
SMC4-227ENST00000497984 ADCY8P40145 1251 aa6.28□□□□□ -1.4
SMC4-227ENST00000497984 HERVK_113P62684 666 aa6.28□□□□□ -1.4
SMC4-227ENST00000497984 DGCR2P98153 550 aa6.28□□□□□ -1.4
SMC4-227ENST00000497984 PTH1RQ03431 593 aa6.28□□□□□ -1.4
SMC4-227ENST00000497984 EIF4HQ15056 248 aaKnown RBP6.28□□□□□ -1.4
SMC4-227ENST00000497984 FAM209AQ5JX71 171 aa6.28□□□□□ -1.4
SMC4-227ENST00000497984 AMNQ9BXJ7 453 aa6.28□□□□□ -1.4
SMC4-227ENST00000497984 SMURF1Q9HCE7 757 aa6.28□□□□□ -1.4
SMC4-227ENST00000497984 CATSPERZQ9NTU4 200 aa6.28□□□□□ -1.4
SMC4-227ENST00000497984 FBXO10Q9UK96 956 aa6.28□□□□□ -1.4
SMC4-227ENST00000497984 PDPK1O15530 556 aa6.27□□□□□ -1.41
SMC4-227ENST00000497984 CLASP2O75122 1294 aaKnown RBP6.27□□□□□ -1.41
SMC4-227ENST00000497984 ZNF202O95125 648 aa6.27□□□□□ -1.41
SMC4-227ENST00000497984 KRT15P19012 456 aa6.27□□□□□ -1.41
SMC4-227ENST00000497984 KCNQ1P51787 676 aa6.27□□□□□ -1.41
SMC4-227ENST00000497984 GUCY1A3Q02108 690 aa6.27□□□□□ -1.41
SMC4-227ENST00000497984 SEC23AQ15436 765 aa6.27□□□□□ -1.41
SMC4-227ENST00000497984 TRIM68Q6AZZ1 485 aa6.27□□□□□ -1.41
SMC4-227ENST00000497984 ZNF808Q8N4W9 903 aaPredicted RBP6.27□□□□□ -1.41
SMC4-227ENST00000497984 IL17DQ8TAD2 202 aa6.27□□□□□ -1.41
SMC4-227ENST00000497984 ZNF428Q96B54 188 aa6.27□□□□□ -1.41
SMC4-227ENST00000497984 BTBD2Q9BX70 525 aa6.27□□□□□ -1.41
SMC4-227ENST00000497984 TRIM55Q9BYV6 548 aa6.27□□□□□ -1.41
SMC4-227ENST00000497984 PRAMEF25A6NGN4 478 aa6.26□□□□□ -1.41
SMC4-227ENST00000497984 KCNK3O14649 394 aa6.26□□□□□ -1.41
SMC4-227ENST00000497984 SUMO1P63165 101 aaKnown RBP6.26□□□□□ -1.41
SMC4-227ENST00000497984 ABHD18Q0P651 414 aa6.26□□□□□ -1.41
SMC4-227ENST00000497984 FOXL1Q12952 345 aa6.26□□□□□ -1.41
SMC4-227ENST00000497984 RASGRF1Q13972 1273 aa6.26□□□□□ -1.41
SMC4-227ENST00000497984 KANK2Q63ZY3 851 aa6.26□□□□□ -1.41
SMC4-227ENST00000497984 USP30Q70CQ3 517 aa6.26□□□□□ -1.41
SMC4-227ENST00000497984 ZBTB38Q8NAP3 1195 aaPredicted RBP6.26□□□□□ -1.41
SMC4-227ENST00000497984 FAM89AQ96GI7 184 aa6.26□□□□□ -1.41
SMC4-227ENST00000497984 EXOC2Q96KP1 924 aa6.26□□□□□ -1.41
SMC4-227ENST00000497984 CDC6Q99741 560 aa6.26□□□□□ -1.41
SMC4-227ENST00000497984 C12orf65Q9H3J6 166 aaKnown RBP6.26□□□□□ -1.41
SMC4-227ENST00000497984 MSL2Q9HCI7 577 aa6.26□□□□□ -1.41
SMC4-227ENST00000497984 CDC42EP3Q9UKI2 254 aa6.26□□□□□ -1.41
SMC4-227ENST00000497984 PCDHA9Q9Y5H5 950 aa6.26□□□□□ -1.41
SMC4-227ENST00000497984 C1SP09871 688 aa6.25□□□□□ -1.41
SMC4-227ENST00000497984 SRGAP2CP0DJJ0 459 aa6.25□□□□□ -1.41
SMC4-227ENST00000497984 ACRV1P26436 265 aa6.25□□□□□ -1.41
SMC4-227ENST00000497984 RPS19P39019 145 aaKnown RBP6.25□□□□□ -1.41
SMC4-227ENST00000497984 TGFB2P61812 414 aa6.25□□□□□ -1.41
SMC4-227ENST00000497984 LACTBP83111 547 aaPredicted RBP6.25□□□□□ -1.41
SMC4-227ENST00000497984 PCOLCEQ15113 449 aa6.25□□□□□ -1.41
SMC4-227ENST00000497984 CRY1Q16526 586 aa6.25□□□□□ -1.41
SMC4-227ENST00000497984 LSM12Q3MHD2 195 aaKnown RBP6.25□□□□□ -1.41
SMC4-227ENST00000497984 TMEM200BQ69YZ2 307 aa6.25□□□□□ -1.41
SMC4-227ENST00000497984 LRSAM1Q6UWE0 723 aa6.25□□□□□ -1.41
SMC4-227ENST00000497984 C1orf210Q8IVY1 113 aa6.25□□□□□ -1.41
SMC4-227ENST00000497984 AMER2Q8N7J2 671 aa6.25□□□□□ -1.41
SMC4-227ENST00000497984 CACTINQ8WUQ7 758 aaKnown RBP6.25□□□□□ -1.41
SMC4-227ENST00000497984 CSRNP2Q9H175 543 aa6.25□□□□□ -1.41
SMC4-227ENST00000497984 PFDN2Q9UHV9 154 aa6.25□□□□□ -1.41
SMC4-227ENST00000497984 PUF60Q9UHX1 559 aaKnown RBP6.25□□□□□ -1.41
SMC4-227ENST00000497984 CCDC66A2RUB6 948 aa6.24□□□□□ -1.41
SMC4-227ENST00000497984 DIAPH1O60610 1272 aaKnown RBP6.24□□□□□ -1.41
SMC4-227ENST00000497984 NAT1P18440 290 aa6.24□□□□□ -1.41
SMC4-227ENST00000497984 ECE1P42892 770 aa6.24□□□□□ -1.41
SMC4-227ENST00000497984 GABREP78334 506 aa6.24□□□□□ -1.41
SMC4-227ENST00000497984 ST5P78524 1137 aa6.24□□□□□ -1.41
SMC4-227ENST00000497984 CD83Q01151 205 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms