RNA–Protein interactions for RNA: ENST00000497506.5

FAM3A-220, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-220ENST00000497506 SERINC5Q86VE9 423 aa18.21■□□□□ 0.51
FAM3A-220ENST00000497506 CKAP2LQ8IYA6 745 aa18.21■□□□□ 0.51
FAM3A-220ENST00000497506 TRAPPC12Q8WVT3 735 aa18.21■□□□□ 0.51
FAM3A-220ENST00000497506 FOXD4L4Q8WXT5 416 aaPredicted RBP18.21■□□□□ 0.51
FAM3A-220ENST00000497506 TNPO1Q92973 898 aaKnown RBP18.21■□□□□ 0.51
FAM3A-220ENST00000497506 WNT8BQ93098 351 aa18.21■□□□□ 0.51
FAM3A-220ENST00000497506 DYDC2Q96IM9 177 aa18.21■□□□□ 0.51
FAM3A-220ENST00000497506 HSD17B14Q9BPX1 270 aa18.21■□□□□ 0.51
FAM3A-220ENST00000497506 EIF2AK1Q9BQI3 630 aaKnown RBP18.21■□□□□ 0.51
FAM3A-220ENST00000497506 WRAP73Q9P2S5 460 aaPredicted RBP18.21■□□□□ 0.51
FAM3A-220ENST00000497506 UMODL1Q5DID0 1318 aa18.21■□□□□ 0.51
FAM3A-220ENST00000497506 COL1A2P08123 1366 aa18.2■□□□□ 0.5
FAM3A-220ENST00000497506 SLITRK3O94933 977 aa18.2■□□□□ 0.5
FAM3A-220ENST00000497506 F13A1P00488 732 aa18.2■□□□□ 0.5
FAM3A-220ENST00000497506 RAG1P15918 1043 aa18.2■□□□□ 0.5
FAM3A-220ENST00000497506 IGBP1P78318 339 aa18.2■□□□□ 0.5
FAM3A-220ENST00000497506 PDIA5Q14554 519 aa18.2■□□□□ 0.5
FAM3A-220ENST00000497506 TRIM71Q2Q1W2 868 aaKnown RBP18.2■□□□□ 0.5
FAM3A-220ENST00000497506 ZNF484Q5JVG2 852 aa18.2■□□□□ 0.5
FAM3A-220ENST00000497506 TRMT1LQ7Z2T5 733 aaKnown RBP18.2■□□□□ 0.5
FAM3A-220ENST00000497506 IGSF22Q8N9C0 903 aa18.2■□□□□ 0.5
FAM3A-220ENST00000497506 FAM167AQ96KS9 214 aa18.2■□□□□ 0.5
FAM3A-220ENST00000497506 FTOQ9C0B1 505 aaKnown RBP eCLIP18.2■□□□□ 0.5
FAM3A-220ENST00000497506 HIPK3Q9H422 1215 aa18.2■□□□□ 0.5
FAM3A-220ENST00000497506 NRBP2Q9NSY0 501 aa18.2■□□□□ 0.5
FAM3A-220ENST00000497506 ZDHHC9Q9Y397 364 aa18.2■□□□□ 0.5
FAM3A-220ENST00000497506 CLIC4Q9Y696 253 aa18.2■□□□□ 0.5
FAM3A-220ENST00000497506 BRD1O95696 1058 aa18.19■□□□□ 0.5
FAM3A-220ENST00000497506 CYP2C18P33260 490 aa18.19■□□□□ 0.5
FAM3A-220ENST00000497506 CYP4A11Q02928 519 aa18.19■□□□□ 0.5
FAM3A-220ENST00000497506 RBL2Q08999 1139 aa18.19■□□□□ 0.5
FAM3A-220ENST00000497506 CTTNQ14247 550 aaKnown RBP18.19■□□□□ 0.5
FAM3A-220ENST00000497506 PTPAQ15257 358 aa18.19■□□□□ 0.5
FAM3A-220ENST00000497506 TMEM266Q2M3C6 531 aa18.19■□□□□ 0.5
FAM3A-220ENST00000497506 XKR3Q5GH77 459 aa18.19■□□□□ 0.5
FAM3A-220ENST00000497506 ARL6IP4Q66PJ3 421 aaKnown RBP18.19■□□□□ 0.5
FAM3A-220ENST00000497506 DTHD1Q6ZMT9 781 aa18.19■□□□□ 0.5
FAM3A-220ENST00000497506 BADQ92934 168 aa18.19■□□□□ 0.5
FAM3A-220ENST00000497506 ZBTB10Q96DT7 871 aa18.19■□□□□ 0.5
FAM3A-220ENST00000497506 LXNQ9BS40 222 aa18.19■□□□□ 0.5
FAM3A-220ENST00000497506 PPP1R12CQ9BZL4 782 aa18.19■□□□□ 0.5
FAM3A-220ENST00000497506 TUBE1Q9UJT0 475 aa18.19■□□□□ 0.5
FAM3A-220ENST00000497506 TMEM150BA6NC51 233 aa18.18■□□□□ 0.5
FAM3A-220ENST00000497506 DKC1O60832 514 aaKnown RBP eCLIP18.18■□□□□ 0.5
FAM3A-220ENST00000497506 BMP15O95972 392 aa18.18■□□□□ 0.5
FAM3A-220ENST00000497506 SPATA31C1P0DKV0 1188 aa18.18■□□□□ 0.5
FAM3A-220ENST00000497506 RUFY4Q6ZNE9 571 aa18.18■□□□□ 0.5
FAM3A-220ENST00000497506 TPH2Q8IWU9 490 aa18.18■□□□□ 0.5
FAM3A-220ENST00000497506 C4orf19Q8IY42 314 aa18.18■□□□□ 0.5
FAM3A-220ENST00000497506 NEK9Q8TD19 979 aa18.18■□□□□ 0.5
FAM3A-220ENST00000497506 USP28Q96RU2 1077 aa18.18■□□□□ 0.5
FAM3A-220ENST00000497506 NIFKQ9BYG3 293 aaKnown RBP18.18■□□□□ 0.5
FAM3A-220ENST00000497506 WNT8AQ9H1J5 351 aa18.18■□□□□ 0.5
FAM3A-220ENST00000497506 ZSWIM4Q9H7M6 989 aa18.18■□□□□ 0.5
FAM3A-220ENST00000497506 LRWD1Q9UFC0 647 aa18.18■□□□□ 0.5
FAM3A-220ENST00000497506 CEP131Q9UPN4 1083 aa18.18■□□□□ 0.5
FAM3A-220ENST00000497506 EVPLQ92817 2033 aa18.18■□□□□ 0.5
FAM3A-220ENST00000497506 TANC1Q9C0D5 1861 aa18.18■□□□□ 0.5
FAM3A-220ENST00000497506 DDX11L8A8MPP1 907 aa18.17■□□□□ 0.5
FAM3A-220ENST00000497506 PITPNM1O00562 1244 aa18.17■□□□□ 0.5
FAM3A-220ENST00000497506 MED24O75448 989 aa18.17■□□□□ 0.5
FAM3A-220ENST00000497506 LYPLA2O95372 231 aa18.17■□□□□ 0.5
FAM3A-220ENST00000497506 KLRC1P26715 233 aa18.17■□□□□ 0.5
FAM3A-220ENST00000497506 DDIT3P35638 169 aa18.17■□□□□ 0.5
FAM3A-220ENST00000497506 MAGEA10P43363 369 aaPredicted RBP18.17■□□□□ 0.5
FAM3A-220ENST00000497506 MDM2Q00987 491 aaPredicted RBP18.17■□□□□ 0.5
FAM3A-220ENST00000497506 BFSP2Q13515 415 aa18.17■□□□□ 0.5
FAM3A-220ENST00000497506 TARBP2Q15633 366 aaKnown RBP18.17■□□□□ 0.5
FAM3A-220ENST00000497506 MFSD5Q6N075 450 aa18.17■□□□□ 0.5
FAM3A-220ENST00000497506 MTHFD1LQ6UB35 978 aa18.17■□□□□ 0.5
FAM3A-220ENST00000497506 ANO5Q75V66 913 aa18.17■□□□□ 0.5
FAM3A-220ENST00000497506 CATSPER3Q86XQ3 398 aa18.17■□□□□ 0.5
FAM3A-220ENST00000497506 CAGE1Q8TC20 777 aa18.17■□□□□ 0.5
FAM3A-220ENST00000497506 CEP89Q96ST8 783 aa18.17■□□□□ 0.5
FAM3A-220ENST00000497506 POLR3CQ9BUI4 534 aaPredicted RBP18.17■□□□□ 0.5
FAM3A-220ENST00000497506 PCDHA2Q9Y5H9 948 aa18.17■□□□□ 0.5
FAM3A-220ENST00000497506 VWA3AA6NCI4 1184 aa18.16■□□□□ 0.5
FAM3A-220ENST00000497506 ZBTB39O15060 712 aa18.16■□□□□ 0.5
FAM3A-220ENST00000497506 C22orf31O95567 290 aa18.16■□□□□ 0.5
FAM3A-220ENST00000497506 CKBP12277 381 aa18.16■□□□□ 0.5
FAM3A-220ENST00000497506 CCL23P55773 120 aa18.16■□□□□ 0.5
FAM3A-220ENST00000497506 CEBPZQ03701 1054 aaKnown RBP18.16■□□□□ 0.5
FAM3A-220ENST00000497506 PRPF38BQ5VTL8 546 aaKnown RBP18.16■□□□□ 0.5
FAM3A-220ENST00000497506 TAF2Q6P1X5 1199 aa18.16■□□□□ 0.5
FAM3A-220ENST00000497506 TRAF7Q6Q0C0 670 aa18.16■□□□□ 0.5
FAM3A-220ENST00000497506 CCDC155Q8N6L0 562 aa18.16■□□□□ 0.5
FAM3A-220ENST00000497506 ERMNQ8TAM6 284 aa18.16■□□□□ 0.5
FAM3A-220ENST00000497506 GDF15Q99988 308 aa18.16■□□□□ 0.5
FAM3A-220ENST00000497506 LBHD1Q9BQE6 289 aaPredicted RBP18.16■□□□□ 0.5
FAM3A-220ENST00000497506 RAB34Q9BZG1 259 aa18.16■□□□□ 0.5
FAM3A-220ENST00000497506 TUFT1Q9NNX1 390 aa18.16■□□□□ 0.5
FAM3A-220ENST00000497506 SEPT9Q9UHD8 586 aaPredicted RBP18.16■□□□□ 0.5
FAM3A-220ENST00000497506 SCN5AQ14524 2016 aa18.16■□□□□ 0.5
FAM3A-220ENST00000497506 ARID2Q68CP9 1835 aa18.16■□□□□ 0.5
FAM3A-220ENST00000497506 PP2D1A8MPX8 630 aa18.15■□□□□ 0.5
FAM3A-220ENST00000497506 IQCF3P0C7M6 154 aa18.15■□□□□ 0.5
FAM3A-220ENST00000497506 RPA1P27694 616 aa18.15■□□□□ 0.5
FAM3A-220ENST00000497506 ANP32AP39687 249 aaKnown RBP18.15■□□□□ 0.5
FAM3A-220ENST00000497506 NASPP49321 788 aaPredicted RBP18.15■□□□□ 0.5
FAM3A-220ENST00000497506 GRIN1Q05586 938 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms