RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 CBX4O00257 560 aa5.54□□□□□ -1.52
SMC4-225ENST00000497203 ZEB2O60315 1214 aa5.54□□□□□ -1.52
SMC4-225ENST00000497203 GAS7O60861 476 aa5.54□□□□□ -1.52
SMC4-225ENST00000497203 RAB11FIP3O75154 756 aa5.54□□□□□ -1.52
SMC4-225ENST00000497203 GLRX3O76003 335 aaKnown RBP5.54□□□□□ -1.52
SMC4-225ENST00000497203 PTPN1P18031 435 aaKnown RBP5.54□□□□□ -1.52
SMC4-225ENST00000497203 POU3F3P20264 500 aaPredicted RBP5.54□□□□□ -1.52
SMC4-225ENST00000497203 HOXA5P20719 270 aa5.54□□□□□ -1.52
SMC4-225ENST00000497203 RPL13P26373 211 aaKnown RBP5.54□□□□□ -1.52
SMC4-225ENST00000497203 SARSP49591 514 aaKnown RBP5.54□□□□□ -1.52
SMC4-225ENST00000497203 LACTBP83111 547 aaPredicted RBP5.54□□□□□ -1.52
SMC4-225ENST00000497203 STRN3Q13033 797 aa5.54□□□□□ -1.52
SMC4-225ENST00000497203 ARHGAP44Q17R89 818 aa5.54□□□□□ -1.52
SMC4-225ENST00000497203 TMEM177Q53S58 311 aa5.54□□□□□ -1.52
SMC4-225ENST00000497203 FIGNQ5HY92 759 aa5.54□□□□□ -1.52
SMC4-225ENST00000497203 PHF19Q5T6S3 580 aa5.54□□□□□ -1.52
SMC4-225ENST00000497203 FSTL4Q6MZW2 842 aa5.54□□□□□ -1.52
SMC4-225ENST00000497203 TTLL7Q6ZT98 887 aa5.54□□□□□ -1.52
SMC4-225ENST00000497203 FERMT3Q86UX7 667 aa5.54□□□□□ -1.52
SMC4-225ENST00000497203 NLGN4XQ8N0W4 816 aa5.54□□□□□ -1.52
SMC4-225ENST00000497203 CHST14Q8NCH0 376 aa5.54□□□□□ -1.52
SMC4-225ENST00000497203 CEP89Q96ST8 783 aa5.54□□□□□ -1.52
SMC4-225ENST00000497203 TTC1Q99614 292 aa5.54□□□□□ -1.52
SMC4-225ENST00000497203 XYLT2Q9H1B5 865 aa5.54□□□□□ -1.52
SMC4-225ENST00000497203 IFT22Q9H7X7 185 aa5.54□□□□□ -1.52
SMC4-225ENST00000497203 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.53□□□□□ -1.52
SMC4-225ENST00000497203 OTOL1A6NHN0 477 aaPredicted RBP5.53□□□□□ -1.52
SMC4-225ENST00000497203 SASH1O94885 1247 aa5.53□□□□□ -1.52
SMC4-225ENST00000497203 EYA4O95677 639 aa5.53□□□□□ -1.52
SMC4-225ENST00000497203 F2P00734 622 aa5.53□□□□□ -1.52
SMC4-225ENST00000497203 KCNC1P48547 511 aa5.53□□□□□ -1.52
SMC4-225ENST00000497203 CDKN1CP49918 316 aaPredicted RBP5.53□□□□□ -1.52
SMC4-225ENST00000497203 OCRLQ01968 901 aa5.53□□□□□ -1.52
SMC4-225ENST00000497203 SEPT7Q16181 437 aaKnown RBP5.53□□□□□ -1.52
SMC4-225ENST00000497203 RNF219Q5W0B1 726 aaPredicted RBP5.53□□□□□ -1.52
SMC4-225ENST00000497203 BTBD8Q5XKL5 378 aa5.53□□□□□ -1.52
SMC4-225ENST00000497203 CD276Q5ZPR3 534 aa5.53□□□□□ -1.52
SMC4-225ENST00000497203 VASNQ6EMK4 673 aa5.53□□□□□ -1.52
SMC4-225ENST00000497203 OVCH1Q7RTY7 1134 aa5.53□□□□□ -1.52
SMC4-225ENST00000497203 NECAB2Q7Z6G3 386 aa5.53□□□□□ -1.52
SMC4-225ENST00000497203 ZDHHC14Q8IZN3 488 aa5.53□□□□□ -1.52
SMC4-225ENST00000497203 DTX3Q8N9I9 347 aa5.53□□□□□ -1.52
SMC4-225ENST00000497203 CLIC6Q96NY7 704 aa5.53□□□□□ -1.52
SMC4-225ENST00000497203 TMEM209Q96SK2 561 aa5.53□□□□□ -1.52
SMC4-225ENST00000497203 RIC8BQ9NVN3 520 aa5.53□□□□□ -1.52
SMC4-225ENST00000497203 B4GALT6Q9UBX8 382 aa5.53□□□□□ -1.52
SMC4-225ENST00000497203 CROTQ9UKG9 612 aa5.53□□□□□ -1.52
SMC4-225ENST00000497203 APOBEC2Q9Y235 224 aaKnown RBP5.53□□□□□ -1.52
SMC4-225ENST00000497203 ATP23Q9Y6H3 246 aa5.53□□□□□ -1.52
SMC4-225ENST00000497203 DDX3XO00571 662 aaKnown RBP eCLIP5.52□□□□□ -1.53
SMC4-225ENST00000497203 PDGFRBP09619 1106 aa5.52□□□□□ -1.53
SMC4-225ENST00000497203 MLLT6P55198 1093 aaPredicted RBP5.52□□□□□ -1.53
SMC4-225ENST00000497203 PFKPQ01813 784 aa5.52□□□□□ -1.53
SMC4-225ENST00000497203 SEC23AQ15436 765 aa5.52□□□□□ -1.53
SMC4-225ENST00000497203 PLEKHG6Q3KR16 790 aa5.52□□□□□ -1.53
SMC4-225ENST00000497203 CPZQ66K79 652 aa5.52□□□□□ -1.53
SMC4-225ENST00000497203 HHIPL2Q6UWX4 724 aa5.52□□□□□ -1.53
SMC4-225ENST00000497203 STRA8Q7Z7C7 330 aa5.52□□□□□ -1.53
SMC4-225ENST00000497203 ZNF761Q86XN6 746 aaPredicted RBP5.52□□□□□ -1.53
SMC4-225ENST00000497203 NOSTRINQ8IVI9 506 aa5.52□□□□□ -1.53
SMC4-225ENST00000497203 C2orf69Q8N8R5 385 aa5.52□□□□□ -1.53
SMC4-225ENST00000497203 WDR66Q8TBY9 1149 aa5.52□□□□□ -1.53
SMC4-225ENST00000497203 ADAMTS17Q8TE56 1095 aa5.52□□□□□ -1.53
SMC4-225ENST00000497203 FAM126AQ9BYI3 521 aaPredicted RBP5.52□□□□□ -1.53
SMC4-225ENST00000497203 A0A0G2JLL6 359 aaPredicted RBP5.51□□□□□ -1.53
SMC4-225ENST00000497203 ZNF839A8K0R7 811 aa5.51□□□□□ -1.53
SMC4-225ENST00000497203 NOBOXO60393 691 aa5.51□□□□□ -1.53
SMC4-225ENST00000497203 S100BP04271 92 aaPredicted RBP5.51□□□□□ -1.53
SMC4-225ENST00000497203 ZNF28P17035 718 aa5.51□□□□□ -1.53
SMC4-225ENST00000497203 BPIP17213 487 aa5.51□□□□□ -1.53
SMC4-225ENST00000497203 MECP2P51608 486 aaKnown RBP5.51□□□□□ -1.53
SMC4-225ENST00000497203 IL2P60568 153 aa5.51□□□□□ -1.53
SMC4-225ENST00000497203 EXOSC10Q01780 885 aaKnown RBP5.51□□□□□ -1.53
SMC4-225ENST00000497203 STAT4Q14765 748 aa5.51□□□□□ -1.53
SMC4-225ENST00000497203 SKIDA1Q1XH10 827 aa5.51□□□□□ -1.53
SMC4-225ENST00000497203 NT5DC1Q5TFE4 455 aa5.51□□□□□ -1.53
SMC4-225ENST00000497203 EP400NLQ6ZTU2 488 aa5.51□□□□□ -1.53
SMC4-225ENST00000497203 C11orf74Q86VG3 221 aa5.51□□□□□ -1.53
SMC4-225ENST00000497203 SPATS2Q86XZ4 545 aaKnown RBP5.51□□□□□ -1.53
SMC4-225ENST00000497203 ZCCHC14Q8WYQ9 949 aaKnown RBP5.51□□□□□ -1.53
SMC4-225ENST00000497203 SCYL1Q96KG9 808 aa5.51□□□□□ -1.53
SMC4-225ENST00000497203 SLC39A2Q9NP94 309 aa5.51□□□□□ -1.53
SMC4-225ENST00000497203 DLL4Q9NR61 685 aa5.51□□□□□ -1.53
SMC4-225ENST00000497203 PTPDC1A2A3K4 754 aa5.5□□□□□ -1.53
SMC4-225ENST00000497203 TRAF5O00463 557 aa5.5□□□□□ -1.53
SMC4-225ENST00000497203 SCDO00767 359 aa5.5□□□□□ -1.53
SMC4-225ENST00000497203 GPR39O43194 453 aa5.5□□□□□ -1.53
SMC4-225ENST00000497203 CLASP2O75122 1294 aaKnown RBP5.5□□□□□ -1.53
SMC4-225ENST00000497203 C4BPAP04003 597 aaKnown RBP5.5□□□□□ -1.53
SMC4-225ENST00000497203 ENO2P09104 434 aaPredicted RBP5.5□□□□□ -1.53
SMC4-225ENST00000497203 GJA4P35212 333 aa5.5□□□□□ -1.53
SMC4-225ENST00000497203 IL13P35225 146 aa5.5□□□□□ -1.53
SMC4-225ENST00000497203 GLRBP48167 497 aa5.5□□□□□ -1.53
SMC4-225ENST00000497203 LSSP48449 732 aa5.5□□□□□ -1.53
SMC4-225ENST00000497203 GUCY2FP51841 1108 aa5.5□□□□□ -1.53
SMC4-225ENST00000497203 DSG1Q02413 1049 aa5.5□□□□□ -1.53
SMC4-225ENST00000497203 DBPQ10586 325 aaPredicted RBP5.5□□□□□ -1.53
SMC4-225ENST00000497203 PRAMEF18Q5VWM3 479 aa5.5□□□□□ -1.53
SMC4-225ENST00000497203 MCTP2Q6DN12 878 aa5.5□□□□□ -1.53
SMC4-225ENST00000497203 SMC1BQ8NDV3 1235 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms