RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 ARHGEF11O15085 1522 aa3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 EIF3FO00303 357 aaPredicted RBP3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 TBCAO75347 108 aaKnown RBP3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 BAIAP3O94812 1187 aa3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 REC8O95072 547 aa3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 CNGA1P29973 690 aa3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 ADD2P35612 726 aa3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 ADCY1Q08828 1119 aa3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 TTF1Q15361 905 aaPredicted RBP3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 NFE2Q16621 373 aaPredicted RBP3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 IFI16Q16666 785 aaKnown RBP3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 CLPPQ16740 277 aaPredicted RBP3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 NBPF8Q3BBV2 869 aa3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 LSRQ86X29 649 aaPredicted RBP3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 VPS37DQ86XT2 251 aa3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 IFNL3Q8IZI9 196 aa3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 CPXCR1Q8N123 301 aa3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 ZNF713Q8N859 430 aaPredicted RBP3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 GIMAP8Q8ND71 665 aaPredicted RBP3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 MAML1Q92585 1016 aa3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 ZNF75CPQ92670 426 aaPredicted RBP3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 RELTQ969Z4 430 aa3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 MIEF2Q96C03 454 aa3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 ASIC4Q96FT7 647 aa3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 LIN37Q96GY3 246 aaPredicted RBP3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 RBM17Q96I25 401 aaKnown RBP3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 NAP1L3Q99457 506 aaPredicted RBP3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 FOXP3Q9BZS1 431 aa3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 DNAI2Q9GZS0 605 aa3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 OSBPL5Q9H0X9 879 aaPredicted RBP3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 RC3H2Q9HBD1 1191 aaKnown RBP3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 KCTD5Q9NXV2 234 aa3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 PSD3Q9NYI0 1048 aa3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 GMIPQ9P107 970 aa3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 LUC7L2Q9Y383 392 aaKnown RBP3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 EVC2Q86UK5 1308 aa3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 DHX29Q7Z478 1369 aaKnown RBP3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 EEA1Q15075 1411 aa3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 GOLGA6L19H0YKK7 550 aa3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 FRAT2O75474 233 aaPredicted RBP3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 STAM2O75886 525 aa3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 PRAMEF1O95521 474 aa3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 ESR1P03372 595 aa3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 IFIT2P09913 472 aaKnown RBP3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 RLBP1P12271 317 aa3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 GNAT2P19087 354 aa3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 CTSKP43235 329 aa3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 COPAP53621 1224 aa3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 BPIFB3P59826 476 aa3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 BECN1Q14457 450 aa3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 RCN1Q15293 331 aa3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 ALFQ53S48 1182 aa3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 KIAA1614Q5VZ46 1190 aa3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 SDCCAG8Q86SQ7 713 aaPredicted RBP3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 VSIG10LQ86VR7 867 aa3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 CREG2Q8IUH2 290 aa3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 TEX11Q8IYF3 940 aa3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 SLC7A5P1Q8MH63 180 aa3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 PPHLN1Q8NEY8 458 aaKnown RBP3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 JAKMIP2Q96AA8 810 aa3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 SKA1Q96BD8 255 aa3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 UTP14AQ9BVJ6 771 aaKnown RBP3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 TCF7L2Q9NQB0 619 aa3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 METTL5Q9NRN9 209 aaKnown RBP3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 SLAMF8Q9P0V8 285 aa3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 SCRIBQ14160 1630 aa3.49□□□□□ -1.85
SNRNP48-202ENST00000496946 C2orf81A6NN90 581 aa3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 ELL2O00472 640 aaPredicted RBP3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 USP2O75604 605 aaPredicted RBP3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 RPSAP08865 295 aaKnown RBP3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 FGRP09769 529 aa3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 NCAM1P13591 858 aa3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 PECAM1P16284 738 aaPredicted RBP3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 BTF3P20290 206 aaKnown RBP3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 YY1P25490 414 aa3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 HSPA4P34932 840 aa3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 YARSP54577 528 aaKnown RBP3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 HSD17B7P56937 341 aa3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 PWP1Q13610 501 aa3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 TMEM201Q5SNT2 666 aa3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 SLC6A19Q695T7 634 aa3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 ERAP2Q6P179 960 aa3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 SPATA21Q7Z572 469 aa3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 THEMISQ8N1K5 641 aaPredicted RBP3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 ZNF483Q8TF39 744 aaPredicted RBP3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 TEKT4Q8WW24 435 aa3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 TBC1D5Q92609 795 aa3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 HPS3Q969F9 1004 aa3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 NAF1Q96HR8 494 aaKnown RBP3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 FGD4Q96M96 766 aa3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 FAM126AQ9BYI3 521 aaPredicted RBP3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 TNMDQ9H2S6 317 aa3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 SH3GLB2Q9NR46 395 aa3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 PDRG1Q9NUG6 133 aa3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 GFOD1Q9NXC2 390 aa3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 LUZP4Q9P127 313 aa3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 FBXL5Q9UKA1 691 aa3.48□□□□□ -1.85
SNRNP48-202ENST00000496946 PLA2G2DQ9UNK4 145 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms