RNA–Protein interactions for RNA: ENST00000496826.1

USF3-204, Transcript of upstream transcription factor family member 3, humanhuman

TSL 1 (best)

Gene USF3, Length 8,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-204ENST00000496826 ANAPC2Q9UJX6 822 aa6.26□□□□□ -1.41
USF3-204ENST00000496826 ASAP1Q9ULH1 1129 aa6.26□□□□□ -1.41
USF3-204ENST00000496826 SUGT1Q9Y2Z0 365 aa6.26□□□□□ -1.41
USF3-204ENST00000496826 FAM32AQ9Y421 112 aaKnown RBP6.26□□□□□ -1.41
USF3-204ENST00000496826 HPDP32754 393 aaPredicted RBP6.25□□□□□ -1.41
USF3-204ENST00000496826 CBX5P45973 191 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 PAPOLAP51003 745 aaKnown RBP6.25□□□□□ -1.41
USF3-204ENST00000496826 MDM2Q00987 491 aaPredicted RBP6.25□□□□□ -1.41
USF3-204ENST00000496826 PAK2Q13177 524 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 PGM2L1Q6PCE3 622 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 RAB11FIP2Q7L804 512 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 CLHC1Q8NHS4 586 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 RACGAP1Q9H0H5 632 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 ZSWIM6Q9HCJ5 1215 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 CNGB3Q9NQW8 809 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 WHRNQ9P202 907 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 SNX2O60749 519 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 E2F6O75461 281 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 HIST1H2AGP0C0S8 130 aaPredicted RBP6.25□□□□□ -1.41
USF3-204ENST00000496826 HIST1H2ADP20671 130 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 ADCY2Q08462 1091 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 AP1B1Q10567 949 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 NFIAQ12857 509 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 KCNB1Q14721 858 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 ATP2B3Q16720 1220 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 GSTA3Q16772 222 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 NBPF9Q3BBW0 867 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 ARHGAP17Q68EM7 881 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 HIST2H2AA3Q6FI13 130 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 AIF1LQ9BQI0 150 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 ANKIB1Q9P2G1 1089 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 DGKBQ9Y6T7 804 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 JUNDP17535 347 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 STAT6P42226 847 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 MAPRE2Q15555 327 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 HIST2H2ACQ16777 129 aaPredicted RBP6.25□□□□□ -1.41
USF3-204ENST00000496826 PKN3Q6P5Z2 889 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 C19orf35Q6ZS72 473 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 B4GALNT2Q8NHY0 566 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 PNKPQ96T60 521 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 H2AFJQ9BTM1 129 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 ADA2Q9NZK5 511 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 TUBGCP4Q9UGJ1 667 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 ATP6V1C1P21283 382 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 GFPT1Q06210 699 aaPredicted RBP6.25□□□□□ -1.41
USF3-204ENST00000496826 FNBP1LQ5T0N5 605 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 LRRC8DQ7L1W4 858 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 IFNEQ86WN2 208 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 RNF169Q8NCN4 708 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 ZMYND12Q9H0C1 365 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 VPS54Q9P1Q0 977 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 SAE1Q9UBE0 346 aaPredicted RBP6.25□□□□□ -1.41
USF3-204ENST00000496826 LOC102724159A0A0B4J2E5 919 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 PLEKHG3A1L390 1219 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 FAM92AA1XBS5 289 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 CFAP69A5D8W1 941 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 EXTL3O43909 919 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 ECM2O94769 699 aaPredicted RBP6.25□□□□□ -1.41
USF3-204ENST00000496826 AXLP30530 894 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 HIRAP54198 1017 aaPredicted RBP6.25□□□□□ -1.41
USF3-204ENST00000496826 ZC3H6P61129 1189 aaKnown RBP6.25□□□□□ -1.41
USF3-204ENST00000496826 PWP2Q15269 919 aaKnown RBP6.25□□□□□ -1.41
USF3-204ENST00000496826 ALG11Q2TAA5 492 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 FAM83BQ5T0W9 1011 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 WAPLQ7Z5K2 1190 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 CRLF3Q8IUI8 442 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 FAM9CQ8IZT9 166 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 MAML3Q96JK9 1138 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 HIST1H2AHQ96KK5 128 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 HIST1H2AJQ99878 128 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 ADI1Q9BV57 179 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 DSCC1Q9BVC3 393 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 TEX13AQ9BXU3 409 aaPredicted RBP6.25□□□□□ -1.41
USF3-204ENST00000496826 RSAD1Q9HA92 442 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 CABP2Q9NPB3 220 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 ZFP69BQ9UJL9 534 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 ANAPC7Q9UJX3 599 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 TTLL8A6PVC2 850 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 STX7O15400 261 aaKnown RBP6.25□□□□□ -1.41
USF3-204ENST00000496826 GNA14O95837 355 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 SKIV2L2P42285 1042 aaKnown RBP6.25□□□□□ -1.41
USF3-204ENST00000496826 MYBPC2Q14324 1141 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 METTL23Q86XA0 190 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 CFAP61Q8NHU2 1237 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 PGAP3Q96FM1 320 aaPredicted RBP6.25□□□□□ -1.41
USF3-204ENST00000496826 SERPINB13Q9UIV8 391 aa6.25□□□□□ -1.41
USF3-204ENST00000496826 TRIM64A6NGJ6 449 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 SAGE2PA6NJ88 616 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 PTCD1O75127 700 aaKnown RBP6.24□□□□□ -1.41
USF3-204ENST00000496826 CYP4A11Q02928 519 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 PTPN21Q16825 1174 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 PTPRNQ16849 979 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 GPR158Q5T848 1215 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 CYP4A22Q5TCH4 519 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 AACSQ86V21 672 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 NMRK1Q9NWW6 199 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 KIAA1468Q9P260 1216 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 UPB1Q9UBR1 384 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 TBK1Q9UHD2 729 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 SNAPC5O75971 98 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms