RNA–Protein interactions for RNA: ENST00000496822.1

NEK4-206, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-206ENST00000496822 ASB2Q96Q27 587 aa17.14■□□□□ 0.33
NEK4-206ENST00000496822 YME1L1Q96TA2 773 aa17.14■□□□□ 0.33
NEK4-206ENST00000496822 AGO3Q9H9G7 860 aaKnown RBP17.14■□□□□ 0.33
NEK4-206ENST00000496822 XIRP2A4UGR9 3374 aa17.14■□□□□ 0.33
NEK4-206ENST00000496822 ATP4AP20648 1035 aa17.13■□□□□ 0.33
NEK4-206ENST00000496822 CIITAP33076 1130 aa17.13■□□□□ 0.33
NEK4-206ENST00000496822 TFF2Q03403 129 aa17.13■□□□□ 0.33
NEK4-206ENST00000496822 SKIV2LQ15477 1246 aaKnown RBP17.13■□□□□ 0.33
NEK4-206ENST00000496822 TSHZ1Q6ZSZ6 1077 aa17.13■□□□□ 0.33
NEK4-206ENST00000496822 BICD2Q8TD16 824 aa17.13■□□□□ 0.33
NEK4-206ENST00000496822 LINC01599Q8WXQ3 324 aa17.13■□□□□ 0.33
NEK4-206ENST00000496822 ZNF274Q96GC6 653 aaPredicted RBP17.13■□□□□ 0.33
NEK4-206ENST00000496822 AIFM3Q96NN9 605 aa17.13■□□□□ 0.33
NEK4-206ENST00000496822 ZNF302Q9NR11 478 aa17.13■□□□□ 0.33
NEK4-206ENST00000496822 PDRG1Q9NUG6 133 aa17.13■□□□□ 0.33
NEK4-206ENST00000496822 PCDHA2Q9Y5H9 948 aa17.13■□□□□ 0.33
NEK4-206ENST00000496822 TRPV2Q9Y5S1 764 aa17.13■□□□□ 0.33
NEK4-206ENST00000496822 COL4A6Q14031 1691 aa17.13■□□□□ 0.33
NEK4-206ENST00000496822 ZBTB42B2RXF5 422 aa17.12■□□□□ 0.33
NEK4-206ENST00000496822 DTNBO60941 627 aa17.12■□□□□ 0.33
NEK4-206ENST00000496822 CD52P31358 61 aa17.12■□□□□ 0.33
NEK4-206ENST00000496822 SLC26A2P50443 739 aa17.12■□□□□ 0.33
NEK4-206ENST00000496822 NLRP5P59047 1200 aa17.12■□□□□ 0.33
NEK4-206ENST00000496822 MRPS5P82675 430 aaKnown RBP17.12■□□□□ 0.33
NEK4-206ENST00000496822 SSRP1Q08945 709 aaKnown RBP17.12■□□□□ 0.33
NEK4-206ENST00000496822 FAM160B1Q5W0V3 765 aa17.12■□□□□ 0.33
NEK4-206ENST00000496822 SWSAP1Q6NVH7 229 aa17.12■□□□□ 0.33
NEK4-206ENST00000496822 PDXDC2PQ6P474 469 aa17.12■□□□□ 0.33
NEK4-206ENST00000496822 MTHFD1LQ6UB35 978 aa17.12■□□□□ 0.33
NEK4-206ENST00000496822 TRIM22Q8IYM9 498 aa17.12■□□□□ 0.33
NEK4-206ENST00000496822 ATP8B4Q8TF62 1192 aa17.12■□□□□ 0.33
NEK4-206ENST00000496822 SYMPKQ92797 1274 aaKnown RBP17.12■□□□□ 0.33
NEK4-206ENST00000496822 SH3GLB2Q9NR46 395 aa17.12■□□□□ 0.33
NEK4-206ENST00000496822 KAT6AQ92794 2004 aa17.12■□□□□ 0.33
NEK4-206ENST00000496822 TTC28Q96AY4 2481 aa17.12■□□□□ 0.33
NEK4-206ENST00000496822 SMIM35A0A1B0GVV1 85 aa17.11■□□□□ 0.33
NEK4-206ENST00000496822 CPLX1O14810 134 aa17.11■□□□□ 0.33
NEK4-206ENST00000496822 HBP1O60381 514 aa17.11■□□□□ 0.33
NEK4-206ENST00000496822 NPY5RQ15761 445 aa17.11■□□□□ 0.33
NEK4-206ENST00000496822 ZNF746Q6NUN9 644 aaPredicted RBP17.11■□□□□ 0.33
NEK4-206ENST00000496822 MIS18BP1Q6P0N0 1132 aa17.11■□□□□ 0.33
NEK4-206ENST00000496822 FBXO22Q8NEZ5 403 aa17.11■□□□□ 0.33
NEK4-206ENST00000496822 TBC1D22BQ9NU19 505 aa17.11■□□□□ 0.33
NEK4-206ENST00000496822 MSH4O15457 936 aa17.1■□□□□ 0.33
NEK4-206ENST00000496822 DEXIO95424 95 aa17.1■□□□□ 0.33
NEK4-206ENST00000496822 KLRC1P26715 233 aa17.1■□□□□ 0.33
NEK4-206ENST00000496822 SCRN1Q12765 414 aa17.1■□□□□ 0.33
NEK4-206ENST00000496822 EPC2Q52LR7 807 aa17.1■□□□□ 0.33
NEK4-206ENST00000496822 IER5Q5VY09 327 aa17.1■□□□□ 0.33
NEK4-206ENST00000496822 ADAMTS19Q8TE59 1207 aa17.1■□□□□ 0.33
NEK4-206ENST00000496822 TNPO1Q92973 898 aaKnown RBP17.1■□□□□ 0.33
NEK4-206ENST00000496822 GJA10Q969M2 543 aa17.1■□□□□ 0.33
NEK4-206ENST00000496822 TSPYL2Q9H2G4 693 aaPredicted RBP17.1■□□□□ 0.33
NEK4-206ENST00000496822 PCDHA4Q9UN74 947 aa17.1■□□□□ 0.33
NEK4-206ENST00000496822 MAFBQ9Y5Q3 323 aaPredicted RBP17.1■□□□□ 0.33
NEK4-206ENST00000496822 MUC3AQ02505 3323 aa17.09■□□□□ 0.33
NEK4-206ENST00000496822 M0R2N6 131 aa17.09■□□□□ 0.33
NEK4-206ENST00000496822 ENPP3O14638 875 aa17.09■□□□□ 0.33
NEK4-206ENST00000496822 RPLP2P05387 115 aaKnown RBP17.09■□□□□ 0.33
NEK4-206ENST00000496822 KCNQ1P51787 676 aa17.09■□□□□ 0.33
NEK4-206ENST00000496822 KRT76Q01546 638 aa17.09■□□□□ 0.33
NEK4-206ENST00000496822 TRMT1LQ7Z2T5 733 aaKnown RBP17.09■□□□□ 0.33
NEK4-206ENST00000496822 CKAP2LQ8IYA6 745 aa17.09■□□□□ 0.33
NEK4-206ENST00000496822 TBCKQ8TEA7 893 aa17.09■□□□□ 0.33
NEK4-206ENST00000496822 CELF4Q9BZC1 486 aaKnown RBP17.09■□□□□ 0.33
NEK4-206ENST00000496822 RC3H2Q9HBD1 1191 aaKnown RBP17.09■□□□□ 0.33
NEK4-206ENST00000496822 GABBR1Q9UBS5 961 aa17.09■□□□□ 0.33
NEK4-206ENST00000496822 TPCN1Q9ULQ1 816 aa17.09■□□□□ 0.33
NEK4-206ENST00000496822 IGSF9BQ9UPX0 1349 aa17.09■□□□□ 0.33
NEK4-206ENST00000496822 COL1A2P08123 1366 aa17.09■□□□□ 0.33
NEK4-206ENST00000496822 ADGRA3Q8IWK6 1321 aa17.08■□□□□ 0.32
NEK4-206ENST00000496822 KDM3AQ9Y4C1 1321 aa17.08■□□□□ 0.32
NEK4-206ENST00000496822 M0QZ92 97 aa17.08■□□□□ 0.32
NEK4-206ENST00000496822 TDP2O95551 362 aa17.08■□□□□ 0.32
NEK4-206ENST00000496822 C22orf31O95567 290 aa17.08■□□□□ 0.32
NEK4-206ENST00000496822 PSAPP07602 524 aa17.08■□□□□ 0.32
NEK4-206ENST00000496822 LINC00271P0C7V0 271 aa17.08■□□□□ 0.32
NEK4-206ENST00000496822 TMEM266Q2M3C6 531 aa17.08■□□□□ 0.32
NEK4-206ENST00000496822 ZNF484Q5JVG2 852 aa17.08■□□□□ 0.32
NEK4-206ENST00000496822 RTN4RL1Q86UN2 441 aaPredicted RBP17.08■□□□□ 0.32
NEK4-206ENST00000496822 SMAP1Q8IYB5 467 aaPredicted RBP17.08■□□□□ 0.32
NEK4-206ENST00000496822 KIAA0319LQ8IZA0 1049 aa17.08■□□□□ 0.32
NEK4-206ENST00000496822 BLIDQ8IZY5 108 aa17.08■□□□□ 0.32
NEK4-206ENST00000496822 DAGLBQ8NCG7 672 aa17.08■□□□□ 0.32
NEK4-206ENST00000496822 IL17RAQ96F46 866 aa17.08■□□□□ 0.32
NEK4-206ENST00000496822 PPP1R16BQ96T49 567 aa17.08■□□□□ 0.32
NEK4-206ENST00000496822 CDHR5Q9HBB8 845 aa17.08■□□□□ 0.32
NEK4-206ENST00000496822 LMCD1Q9NZU5 365 aa17.08■□□□□ 0.32
NEK4-206ENST00000496822 TCEAL9Q9UHQ7 104 aa17.08■□□□□ 0.32
NEK4-206ENST00000496822 PADI3Q9ULW8 664 aa17.08■□□□□ 0.32
NEK4-206ENST00000496822 PCDHA10Q9Y5I2 948 aa17.08■□□□□ 0.32
NEK4-206ENST00000496822 WDR64B1ANS9 1081 aa17.07■□□□□ 0.32
NEK4-206ENST00000496822 CHMP2AO43633 222 aa17.07■□□□□ 0.32
NEK4-206ENST00000496822 ZNF862O60290 1169 aa17.07■□□□□ 0.32
NEK4-206ENST00000496822 USP11P51784 963 aa17.07■□□□□ 0.32
NEK4-206ENST00000496822 PAK2Q13177 524 aa17.07■□□□□ 0.32
NEK4-206ENST00000496822 UGCGQ16739 394 aa17.07■□□□□ 0.32
NEK4-206ENST00000496822 CPLX2Q6PUV4 134 aaKnown RBP17.07■□□□□ 0.32
NEK4-206ENST00000496822 TMEM192Q8IY95 271 aa17.07■□□□□ 0.32
NEK4-206ENST00000496822 TMEM40Q8WWA1 233 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms