RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 KCNH2Q12809 1159 aa14.35□□□□□ -0.11
GARNL3-220ENST00000496711 EPHA7Q15375 998 aa14.35□□□□□ -0.11
GARNL3-220ENST00000496711 ASTE1Q2TB18 679 aaPredicted RBP14.35□□□□□ -0.11
GARNL3-220ENST00000496711 SLC9C1Q4G0N8 1177 aa14.35□□□□□ -0.11
GARNL3-220ENST00000496711 C1orf186Q6ZWK4 172 aa14.35□□□□□ -0.11
GARNL3-220ENST00000496711 PRPF38AQ8NAV1 312 aaKnown RBP14.35□□□□□ -0.11
GARNL3-220ENST00000496711 TRIM58Q8NG06 486 aa14.35□□□□□ -0.11
GARNL3-220ENST00000496711 NEK9Q8TD19 979 aa14.35□□□□□ -0.11
GARNL3-220ENST00000496711 TEPSINQ96N21 525 aa14.35□□□□□ -0.11
GARNL3-220ENST00000496711 NACC1Q96RE7 527 aa14.35□□□□□ -0.11
GARNL3-220ENST00000496711 MXRA8Q9BRK3 442 aa14.35□□□□□ -0.11
GARNL3-220ENST00000496711 CRACR2AQ9BSW2 395 aa14.35□□□□□ -0.11
GARNL3-220ENST00000496711 ARFGAP3Q9NP61 516 aa14.35□□□□□ -0.11
GARNL3-220ENST00000496711 GINM1Q9NU53 330 aa14.35□□□□□ -0.11
GARNL3-220ENST00000496711 KCND2Q9NZV8 630 aa14.35□□□□□ -0.11
GARNL3-220ENST00000496711 ZMYM2Q9UBW7 1377 aa14.35□□□□□ -0.11
GARNL3-220ENST00000496711 IPO5O00410 1097 aaKnown RBP14.35□□□□□ -0.11
GARNL3-220ENST00000496711 TACC1O75410 805 aa14.35□□□□□ -0.11
GARNL3-220ENST00000496711 AFPP02771 609 aaKnown RBP14.35□□□□□ -0.11
GARNL3-220ENST00000496711 SERPING1P05155 500 aa14.35□□□□□ -0.11
GARNL3-220ENST00000496711 RPS12P25398 132 aaKnown RBP14.35□□□□□ -0.11
GARNL3-220ENST00000496711 GHRHRQ02643 423 aa14.35□□□□□ -0.11
GARNL3-220ENST00000496711 CKAP4Q07065 602 aaKnown RBP14.35□□□□□ -0.11
GARNL3-220ENST00000496711 B3GNT9Q6UX72 402 aa14.35□□□□□ -0.11
GARNL3-220ENST00000496711 MCF2L2Q86YR7 1114 aa14.35□□□□□ -0.11
GARNL3-220ENST00000496711 RIT2Q99578 217 aa14.35□□□□□ -0.11
GARNL3-220ENST00000496711 KIAA1683Q9H0B3 1180 aa14.35□□□□□ -0.11
GARNL3-220ENST00000496711 GANQ9H2C0 597 aa14.35□□□□□ -0.11
GARNL3-220ENST00000496711 PARVGQ9HBI0 331 aa14.35□□□□□ -0.11
GARNL3-220ENST00000496711 METTL14Q9HCE5 456 aaKnown RBP14.35□□□□□ -0.11
GARNL3-220ENST00000496711 DUSP10Q9Y6W6 482 aa14.35□□□□□ -0.11
GARNL3-220ENST00000496711 RBAK-RBAKDNI3L0D1 243 aa14.34□□□□□ -0.11
GARNL3-220ENST00000496711 PJA2O43164 708 aa14.34□□□□□ -0.11
GARNL3-220ENST00000496711 EPB41P11171 864 aaKnown RBP14.34□□□□□ -0.11
GARNL3-220ENST00000496711 BCRP11274 1271 aa14.34□□□□□ -0.11
GARNL3-220ENST00000496711 XRCC5P13010 732 aaKnown RBP14.34□□□□□ -0.11
GARNL3-220ENST00000496711 GPIHBP1Q8IV16 184 aa14.34□□□□□ -0.11
GARNL3-220ENST00000496711 MYCT1Q8N699 235 aa14.34□□□□□ -0.11
GARNL3-220ENST00000496711 ZFP91Q96JP5 570 aaPredicted RBP14.34□□□□□ -0.11
GARNL3-220ENST00000496711 LXNQ9BS40 222 aa14.34□□□□□ -0.11
GARNL3-220ENST00000496711 PRDM10Q9NQV6 1147 aa14.34□□□□□ -0.11
GARNL3-220ENST00000496711 SEL1LQ9UBV2 794 aa14.34□□□□□ -0.11
GARNL3-220ENST00000496711 RAB21Q9UL25 225 aa14.34□□□□□ -0.11
GARNL3-220ENST00000496711 ODF2LQ9ULJ1 636 aa14.34□□□□□ -0.11
GARNL3-220ENST00000496711 SCAF8Q9UPN6 1271 aaKnown RBP14.34□□□□□ -0.11
GARNL3-220ENST00000496711 CAPN6Q9Y6Q1 641 aa14.34□□□□□ -0.11
GARNL3-220ENST00000496711 WDR81Q562E7 1941 aa14.34□□□□□ -0.11
GARNL3-220ENST00000496711 GOLGB1Q14789 3259 aaKnown RBP14.34□□□□□ -0.11
GARNL3-220ENST00000496711 PHIPQ8WWQ0 1821 aa14.34□□□□□ -0.11
GARNL3-220ENST00000496711 NFIBO00712 420 aa14.33□□□□□ -0.11
GARNL3-220ENST00000496711 TLR2O60603 784 aa14.33□□□□□ -0.11
GARNL3-220ENST00000496711 AKAP3O75969 853 aa14.33□□□□□ -0.11
GARNL3-220ENST00000496711 TBC1D8O95759 1140 aa14.33□□□□□ -0.11
GARNL3-220ENST00000496711 MAGEA1P43355 309 aa14.33□□□□□ -0.11
GARNL3-220ENST00000496711 ZNF131P52739 623 aa14.33□□□□□ -0.11
GARNL3-220ENST00000496711 GFPT1Q06210 699 aaPredicted RBP14.33□□□□□ -0.11
GARNL3-220ENST00000496711 GABPB1Q06547 395 aaPredicted RBP14.33□□□□□ -0.11
GARNL3-220ENST00000496711 RAPGEF1Q13905 1077 aa14.33□□□□□ -0.11
GARNL3-220ENST00000496711 NIPA1Q7RTP0 329 aa14.33□□□□□ -0.11
GARNL3-220ENST00000496711 CLEC4DQ8WXI8 215 aa14.33□□□□□ -0.11
GARNL3-220ENST00000496711 RPGRIP1Q96KN7 1286 aa14.33□□□□□ -0.11
GARNL3-220ENST00000496711 ALS2CR12Q96Q35 445 aa14.33□□□□□ -0.11
GARNL3-220ENST00000496711 BCAS3Q9H6U6 928 aa14.33□□□□□ -0.11
GARNL3-220ENST00000496711 PLCB1Q9NQ66 1216 aa14.33□□□□□ -0.11
GARNL3-220ENST00000496711 COL20A1Q9P218 1284 aa14.33□□□□□ -0.11
GARNL3-220ENST00000496711 WRAP73Q9P2S5 460 aaPredicted RBP14.33□□□□□ -0.11
GARNL3-220ENST00000496711 SFI1A8K8P3 1242 aa14.33□□□□□ -0.12
GARNL3-220ENST00000496711 NFKBIEO00221 500 aa14.33□□□□□ -0.12
GARNL3-220ENST00000496711 RHOXF2BP0C7M4 288 aa14.33□□□□□ -0.12
GARNL3-220ENST00000496711 ITGB5P18084 799 aa14.33□□□□□ -0.12
GARNL3-220ENST00000496711 NMT1P30419 496 aaKnown RBP14.33□□□□□ -0.12
GARNL3-220ENST00000496711 APBA1Q02410 837 aa14.33□□□□□ -0.12
GARNL3-220ENST00000496711 NFIL3Q16649 462 aa14.33□□□□□ -0.12
GARNL3-220ENST00000496711 DCAF17Q5H9S7 520 aaPredicted RBP14.33□□□□□ -0.12
GARNL3-220ENST00000496711 STXBP4Q6ZWJ1 553 aa14.33□□□□□ -0.12
GARNL3-220ENST00000496711 NOA1Q8NC60 698 aaKnown RBP14.33□□□□□ -0.12
GARNL3-220ENST00000496711 HNRNPLLQ8WVV9 542 aaKnown RBP14.33□□□□□ -0.12
GARNL3-220ENST00000496711 PNKPQ96T60 521 aa14.33□□□□□ -0.12
GARNL3-220ENST00000496711 RHOXF2Q9BQY4 288 aa14.33□□□□□ -0.12
GARNL3-220ENST00000496711 MLXIPQ9HAP2 919 aa14.33□□□□□ -0.12
GARNL3-220ENST00000496711 SLC38A10Q9HBR0 1119 aa14.33□□□□□ -0.12
GARNL3-220ENST00000496711 POLD4Q9HCU8 107 aa14.33□□□□□ -0.12
GARNL3-220ENST00000496711 LUC7LQ9NQ29 371 aaKnown RBP14.33□□□□□ -0.12
GARNL3-220ENST00000496711 JRKLQ9Y4A0 524 aa14.33□□□□□ -0.12
GARNL3-220ENST00000496711 ZBTB39O15060 712 aa14.32□□□□□ -0.12
GARNL3-220ENST00000496711 TGFB1I1O43294 461 aa14.32□□□□□ -0.12
GARNL3-220ENST00000496711 CTNND1O60716 968 aaKnown RBP14.32□□□□□ -0.12
GARNL3-220ENST00000496711 SRGAP2O75044 1071 aa14.32□□□□□ -0.12
GARNL3-220ENST00000496711 ERLIN1O75477 346 aa14.32□□□□□ -0.12
GARNL3-220ENST00000496711 MOCS3O95396 460 aa14.32□□□□□ -0.12
GARNL3-220ENST00000496711 EGFRP00533 1210 aa14.32□□□□□ -0.12
GARNL3-220ENST00000496711 TUBBP07437 444 aa14.32□□□□□ -0.12
GARNL3-220ENST00000496711 ALAS1P13196 640 aa14.32□□□□□ -0.12
GARNL3-220ENST00000496711 KCNA1Q09470 495 aa14.32□□□□□ -0.12
GARNL3-220ENST00000496711 ASIC2Q16515 512 aa14.32□□□□□ -0.12
GARNL3-220ENST00000496711 BANK1Q8NDB2 785 aa14.32□□□□□ -0.12
GARNL3-220ENST00000496711 IL31RAQ8NI17 732 aa14.32□□□□□ -0.12
GARNL3-220ENST00000496711 AIPL1Q9NZN9 384 aa14.32□□□□□ -0.12
GARNL3-220ENST00000496711 RLFQ13129 1914 aa14.32□□□□□ -0.12
GARNL3-220ENST00000496711 ARHGEF35A5YM69 484 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms