RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 MARK3P27448 753 aa24.34■■□□□ 1.49
C9orf3-222ENST00000496567 PSEN2P49810 448 aa24.34■■□□□ 1.49
C9orf3-222ENST00000496567 MFSD10Q14728 455 aa24.34■■□□□ 1.49
C9orf3-222ENST00000496567 XKR3Q5GH77 459 aa24.34■■□□□ 1.49
C9orf3-222ENST00000496567 ATP8B4Q8TF62 1192 aa24.34■■□□□ 1.49
C9orf3-222ENST00000496567 BBXQ8WY36 941 aaPredicted RBP24.34■■□□□ 1.49
C9orf3-222ENST00000496567 ABHD8Q96I13 439 aa24.34■■□□□ 1.49
C9orf3-222ENST00000496567 NACC1Q96RE7 527 aa24.34■■□□□ 1.49
C9orf3-222ENST00000496567 WRAP73Q9P2S5 460 aaPredicted RBP24.34■■□□□ 1.49
C9orf3-222ENST00000496567 KIAA1024Q9UPX6 916 aa24.34■■□□□ 1.49
C9orf3-222ENST00000496567 HAS3O00219 553 aa24.33■■□□□ 1.49
C9orf3-222ENST00000496567 PRPF40AO75400 957 aaKnown RBP24.33■■□□□ 1.49
C9orf3-222ENST00000496567 OATP04181 439 aa24.33■■□□□ 1.49
C9orf3-222ENST00000496567 ATP4AP20648 1035 aa24.33■■□□□ 1.49
C9orf3-222ENST00000496567 KARSQ15046 597 aaKnown RBP24.33■■□□□ 1.49
C9orf3-222ENST00000496567 PLCB4Q15147 1175 aa24.33■■□□□ 1.49
C9orf3-222ENST00000496567 KIAA0753Q2KHM9 967 aa24.33■■□□□ 1.49
C9orf3-222ENST00000496567 POTEGQ6S5H5 508 aa24.33■■□□□ 1.49
C9orf3-222ENST00000496567 MRPS27Q92552 414 aaKnown RBP24.33■■□□□ 1.49
C9orf3-222ENST00000496567 VTI1AQ96AJ9 217 aa24.33■■□□□ 1.49
C9orf3-222ENST00000496567 DDX19AQ9NUU7 478 aaKnown RBP24.33■■□□□ 1.49
C9orf3-222ENST00000496567 A0A1W2PQ45 241 aaPredicted RBP24.33■■□□□ 1.48
C9orf3-222ENST00000496567 A0A1W2PQY0 241 aa24.33■■□□□ 1.48
C9orf3-222ENST00000496567 HBP1O60381 514 aa24.33■■□□□ 1.48
C9orf3-222ENST00000496567 XRCC6P12956 609 aaKnown RBP eCLIP24.33■■□□□ 1.48
C9orf3-222ENST00000496567 GRB10Q13322 594 aa24.33■■□□□ 1.48
C9orf3-222ENST00000496567 ECM1Q16610 540 aa24.33■■□□□ 1.48
C9orf3-222ENST00000496567 TPRNQ4KMQ1 711 aa24.33■■□□□ 1.48
C9orf3-222ENST00000496567 CCDC73Q6ZRK6 1079 aa24.33■■□□□ 1.48
C9orf3-222ENST00000496567 OTUD6AQ7L8S5 288 aa24.33■■□□□ 1.48
C9orf3-222ENST00000496567 PYM1Q9BRP8 204 aaKnown RBP24.33■■□□□ 1.48
C9orf3-222ENST00000496567 RNPEPQ9H4A4 650 aa24.33■■□□□ 1.48
C9orf3-222ENST00000496567 TRPC6Q9Y210 931 aa24.33■■□□□ 1.48
C9orf3-222ENST00000496567 YWHABP31946 246 aaKnown RBP24.32■■□□□ 1.48
C9orf3-222ENST00000496567 CHMP4BP1P59074 171 aa24.32■■□□□ 1.48
C9orf3-222ENST00000496567 UBE2HP62256 183 aa24.32■■□□□ 1.48
C9orf3-222ENST00000496567 TMEM119Q4V9L6 283 aa24.32■■□□□ 1.48
C9orf3-222ENST00000496567 TRMT1LQ7Z2T5 733 aaKnown RBP24.32■■□□□ 1.48
C9orf3-222ENST00000496567 FSIP1Q8NA03 581 aa24.32■■□□□ 1.48
C9orf3-222ENST00000496567 PNMA5Q96PV4 448 aa24.32■■□□□ 1.48
C9orf3-222ENST00000496567 STARD7Q9NQZ5 370 aa24.32■■□□□ 1.48
C9orf3-222ENST00000496567 KCNH3Q9ULD8 1083 aa24.32■■□□□ 1.48
C9orf3-222ENST00000496567 DNM3Q9UQ16 869 aa24.32■■□□□ 1.48
C9orf3-222ENST00000496567 DDX11L8A8MPP1 907 aa24.31■■□□□ 1.48
C9orf3-222ENST00000496567 RRAGBQ5VZM2 374 aa24.31■■□□□ 1.48
C9orf3-222ENST00000496567 SEZ6LQ9BYH1 1024 aa24.31■■□□□ 1.48
C9orf3-222ENST00000496567 ANKEF1Q9NU02 776 aa24.31■■□□□ 1.48
C9orf3-222ENST00000496567 SCN10AQ9Y5Y9 1956 aa24.31■■□□□ 1.48
C9orf3-222ENST00000496567 KIAA0100Q14667 2235 aaKnown RBP24.3■■□□□ 1.48
C9orf3-222ENST00000496567 FAM237AA0A1B0GTK4 181 aa24.3■■□□□ 1.48
C9orf3-222ENST00000496567 A0A1B0GVL5 298 aa24.3■■□□□ 1.48
C9orf3-222ENST00000496567 STBD1O95210 358 aa24.3■■□□□ 1.48
C9orf3-222ENST00000496567 PFKFB1P16118 471 aa24.3■■□□□ 1.48
C9orf3-222ENST00000496567 PLCG1P19174 1290 aa24.3■■□□□ 1.48
C9orf3-222ENST00000496567 MNX1P50219 401 aaPredicted RBP24.3■■□□□ 1.48
C9orf3-222ENST00000496567 NBPF20Q3BBV1 942 aa24.3■■□□□ 1.48
C9orf3-222ENST00000496567 TNS4Q8IZW8 715 aa24.3■■□□□ 1.48
C9orf3-222ENST00000496567 PLIN2Q99541 437 aa24.3■■□□□ 1.48
C9orf3-222ENST00000496567 NIFKQ9BYG3 293 aaKnown RBP24.3■■□□□ 1.48
C9orf3-222ENST00000496567 SEPT9Q9UHD8 586 aaPredicted RBP24.3■■□□□ 1.48
C9orf3-222ENST00000496567 BRCA2P51587 3418 aa24.3■■□□□ 1.48
C9orf3-222ENST00000496567 PSMC6P62333 389 aa24.29■■□□□ 1.48
C9orf3-222ENST00000496567 ITGA7Q13683 1181 aa24.29■■□□□ 1.48
C9orf3-222ENST00000496567 NFRKBQ6P4R8 1299 aa24.29■■□□□ 1.48
C9orf3-222ENST00000496567 ANO5Q75V66 913 aa24.29■■□□□ 1.48
C9orf3-222ENST00000496567 PDILTQ8N807 584 aa24.29■■□□□ 1.48
C9orf3-222ENST00000496567 C7orf31Q8N865 590 aa24.29■■□□□ 1.48
C9orf3-222ENST00000496567 PIGOQ8TEQ8 1089 aa24.29■■□□□ 1.48
C9orf3-222ENST00000496567 CCDC43Q96MW1 224 aaKnown RBP24.29■■□□□ 1.48
C9orf3-222ENST00000496567 PANK2Q9BZ23 570 aa24.29■■□□□ 1.48
C9orf3-222ENST00000496567 STK17AQ9UEE5 414 aa24.29■■□□□ 1.48
C9orf3-222ENST00000496567 DBR1Q9UK59 544 aaKnown RBP24.29■■□□□ 1.48
C9orf3-222ENST00000496567 HPSEQ9Y251 543 aa24.29■■□□□ 1.48
C9orf3-222ENST00000496567 A0A0U1RQG5 324 aaPredicted RBP24.29■■□□□ 1.48
C9orf3-222ENST00000496567 GADD45BO75293 160 aaPredicted RBP24.29■■□□□ 1.48
C9orf3-222ENST00000496567 ZNF484Q5JVG2 852 aa24.29■■□□□ 1.48
C9orf3-222ENST00000496567 IQUBQ8NA54 791 aa24.29■■□□□ 1.48
C9orf3-222ENST00000496567 SENP6Q9GZR1 1112 aaPredicted RBP24.29■■□□□ 1.48
C9orf3-222ENST00000496567 PPME1Q9Y570 386 aa24.29■■□□□ 1.48
C9orf3-222ENST00000496567 COL1A2P08123 1366 aa24.28■■□□□ 1.48
C9orf3-222ENST00000496567 NRCAMQ92823 1304 aa24.28■■□□□ 1.48
C9orf3-222ENST00000496567 RRN3P2A6NIE6 340 aa24.28■■□□□ 1.48
C9orf3-222ENST00000496567 E9PMD0 336 aa24.28■■□□□ 1.48
C9orf3-222ENST00000496567 POLR2DO15514 142 aaKnown RBP24.28■■□□□ 1.48
C9orf3-222ENST00000496567 EYA4O95677 639 aa24.28■■□□□ 1.48
C9orf3-222ENST00000496567 SMIM10L2AP0DMW4 78 aa24.28■■□□□ 1.48
C9orf3-222ENST00000496567 SMIM10L2BP0DMW5 78 aa24.28■■□□□ 1.48
C9orf3-222ENST00000496567 EN2P19622 333 aaPredicted RBP24.28■■□□□ 1.48
C9orf3-222ENST00000496567 STAT6P42226 847 aa24.28■■□□□ 1.48
C9orf3-222ENST00000496567 SYKP43405 635 aa24.28■■□□□ 1.48
C9orf3-222ENST00000496567 PPFIA1Q13136 1202 aa24.28■■□□□ 1.48
C9orf3-222ENST00000496567 LMBRD1Q9NUN5 540 aa24.28■■□□□ 1.48
C9orf3-222ENST00000496567 A0A087X0B3 334 aa24.27■■□□□ 1.48
C9orf3-222ENST00000496567 ZBTB39O15060 712 aa24.27■■□□□ 1.48
C9orf3-222ENST00000496567 GNAT1P11488 350 aa24.27■■□□□ 1.48
C9orf3-222ENST00000496567 COL6A1P12109 1028 aa24.27■■□□□ 1.48
C9orf3-222ENST00000496567 INSRRP14616 1297 aa24.27■■□□□ 1.48
C9orf3-222ENST00000496567 NDUFA8P51970 172 aa24.27■■□□□ 1.48
C9orf3-222ENST00000496567 PTPN11Q06124 597 aaPredicted RBP24.27■■□□□ 1.48
C9orf3-222ENST00000496567 XKR9Q5GH70 373 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms