RNA–Protein interactions for RNA: ENST00000496215.5

COL9A2-211, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-211ENST00000496215 LETM2Q2VYF4 491 aa23.33■■□□□ 1.33
COL9A2-211ENST00000496215 SWSAP1Q6NVH7 229 aa23.33■■□□□ 1.33
COL9A2-211ENST00000496215 PIK3AP1Q6ZUJ8 805 aa23.33■■□□□ 1.33
COL9A2-211ENST00000496215 TMCO2Q7Z6W1 182 aaPredicted RBP23.33■■□□□ 1.33
COL9A2-211ENST00000496215 NEK8Q86SG6 692 aa23.33■■□□□ 1.33
COL9A2-211ENST00000496215 ATP8B4Q8TF62 1192 aa23.33■■□□□ 1.33
COL9A2-211ENST00000496215 ZSCAN31Q96LW9 406 aaPredicted RBP23.33■■□□□ 1.33
COL9A2-211ENST00000496215 MBOAT7Q96N66 472 aa23.33■■□□□ 1.33
COL9A2-211ENST00000496215 SH2B1Q9NRF2 756 aaPredicted RBP23.33■■□□□ 1.33
COL9A2-211ENST00000496215 DDX25Q9UHL0 483 aaKnown RBP23.33■■□□□ 1.33
COL9A2-211ENST00000496215 PCDHA10Q9Y5I2 948 aa23.33■■□□□ 1.33
COL9A2-211ENST00000496215 IGSF9BQ9UPX0 1349 aa23.33■■□□□ 1.32
COL9A2-211ENST00000496215 MYH9P35579 1960 aaKnown RBP23.32■■□□□ 1.32
COL9A2-211ENST00000496215 MICAL3Q7RTP6 2002 aa23.32■■□□□ 1.32
COL9A2-211ENST00000496215 COL1A2P08123 1366 aa23.32■■□□□ 1.32
COL9A2-211ENST00000496215 CHMP2AO43633 222 aa23.32■■□□□ 1.32
COL9A2-211ENST00000496215 ARHGEF15O94989 841 aa23.32■■□□□ 1.32
COL9A2-211ENST00000496215 RPLP2P05387 115 aaKnown RBP23.32■■□□□ 1.32
COL9A2-211ENST00000496215 FOSBP53539 338 aa23.32■■□□□ 1.32
COL9A2-211ENST00000496215 WDR5P61964 334 aaKnown RBP23.32■■□□□ 1.32
COL9A2-211ENST00000496215 RPAINQ86UA6 219 aa23.32■■□□□ 1.32
COL9A2-211ENST00000496215 CKAP2LQ8IYA6 745 aa23.32■■□□□ 1.32
COL9A2-211ENST00000496215 TRAPPC12Q8WVT3 735 aa23.32■■□□□ 1.32
COL9A2-211ENST00000496215 NAP1L4Q99733 375 aaKnown RBP23.32■■□□□ 1.32
COL9A2-211ENST00000496215 HBP1O60381 514 aa23.31■■□□□ 1.32
COL9A2-211ENST00000496215 EFCAB14O75071 495 aa23.31■■□□□ 1.32
COL9A2-211ENST00000496215 MMP1P03956 469 aa23.31■■□□□ 1.32
COL9A2-211ENST00000496215 GCFC2P16383 781 aaKnown RBP23.31■■□□□ 1.32
COL9A2-211ENST00000496215 SFNP31947 248 aa23.31■■□□□ 1.32
COL9A2-211ENST00000496215 JAK3P52333 1124 aa23.31■■□□□ 1.32
COL9A2-211ENST00000496215 DEFB103AP81534 67 aa23.31■■□□□ 1.32
COL9A2-211ENST00000496215 MKRN4PQ13434 485 aaPredicted RBP23.31■■□□□ 1.32
COL9A2-211ENST00000496215 FAM26DQ5JW98 314 aa23.31■■□□□ 1.32
COL9A2-211ENST00000496215 ETNPPLQ8TBG4 499 aa23.31■■□□□ 1.32
COL9A2-211ENST00000496215 PHOSPHO2Q8TCD6 241 aa23.31■■□□□ 1.32
COL9A2-211ENST00000496215 LLPHQ9BRT6 129 aaKnown RBP23.31■■□□□ 1.32
COL9A2-211ENST00000496215 GABBR1Q9UBS5 961 aa23.31■■□□□ 1.32
COL9A2-211ENST00000496215 PCDHA11Q9Y5I1 949 aa23.31■■□□□ 1.32
COL9A2-211ENST00000496215 ABHD14A-ACY1A0A1B0GW23 586 aa23.3■■□□□ 1.32
COL9A2-211ENST00000496215 SLC37A4O43826 429 aa23.3■■□□□ 1.32
COL9A2-211ENST00000496215 ST18O60284 1047 aa23.3■■□□□ 1.32
COL9A2-211ENST00000496215 NR5A1Q13285 461 aa23.3■■□□□ 1.32
COL9A2-211ENST00000496215 IKBKEQ14164 716 aa23.3■■□□□ 1.32
COL9A2-211ENST00000496215 DNAJB3Q8WWF6 145 aa23.3■■□□□ 1.32
COL9A2-211ENST00000496215 GJA10Q969M2 543 aa23.3■■□□□ 1.32
COL9A2-211ENST00000496215 FAM49AQ9H0Q0 323 aaPredicted RBP23.3■■□□□ 1.32
COL9A2-211ENST00000496215 UNC45AQ9H3U1 944 aa23.3■■□□□ 1.32
COL9A2-211ENST00000496215 DISC1Q9NRI5 854 aa23.3■■□□□ 1.32
COL9A2-211ENST00000496215 MAFBQ9Y5Q3 323 aaPredicted RBP23.3■■□□□ 1.32
COL9A2-211ENST00000496215 CCNT1O60563 726 aaKnown RBP23.29■■□□□ 1.32
COL9A2-211ENST00000496215 PSMD10O75832 226 aa23.29■■□□□ 1.32
COL9A2-211ENST00000496215 PLEKHG4Q58EX7 1191 aa23.29■■□□□ 1.32
COL9A2-211ENST00000496215 KRT40Q6A162 431 aa23.29■■□□□ 1.32
COL9A2-211ENST00000496215 PPP4R3AQ6IN85 833 aa23.29■■□□□ 1.32
COL9A2-211ENST00000496215 HERC6Q8IVU3 1022 aa23.29■■□□□ 1.32
COL9A2-211ENST00000496215 DIS3L2Q8IYB7 885 aaKnown RBP23.29■■□□□ 1.32
COL9A2-211ENST00000496215 BBXQ8WY36 941 aaPredicted RBP23.29■■□□□ 1.32
COL9A2-211ENST00000496215 SEPT8Q92599 483 aa23.29■■□□□ 1.32
COL9A2-211ENST00000496215 FAM167AQ96KS9 214 aa23.29■■□□□ 1.32
COL9A2-211ENST00000496215 SLC28A3Q9HAS3 691 aa23.29■■□□□ 1.32
COL9A2-211ENST00000496215 PCDHA2Q9Y5H9 948 aa23.29■■□□□ 1.32
COL9A2-211ENST00000496215 MRPS6P82932 125 aaKnown RBP23.28■■□□□ 1.32
COL9A2-211ENST00000496215 MGAT3Q09327 533 aa23.28■■□□□ 1.32
COL9A2-211ENST00000496215 EARS2Q5JPH6 523 aaKnown RBP23.28■■□□□ 1.32
COL9A2-211ENST00000496215 ZNF484Q5JVG2 852 aa23.28■■□□□ 1.32
COL9A2-211ENST00000496215 MTHFD1LQ6UB35 978 aa23.28■■□□□ 1.32
COL9A2-211ENST00000496215 SPRED2Q7Z698 418 aa23.28■■□□□ 1.32
COL9A2-211ENST00000496215 DBF4BQ8NFT6 615 aa23.28■■□□□ 1.32
COL9A2-211ENST00000496215 RDM1Q8NG50 284 aa23.28■■□□□ 1.32
COL9A2-211ENST00000496215 TNFRSF25Q93038 417 aa23.28■■□□□ 1.32
COL9A2-211ENST00000496215 PRDM12Q9H4Q4 367 aa23.28■■□□□ 1.32
COL9A2-211ENST00000496215 MYO9BQ13459 2157 aa23.27■■□□□ 1.32
COL9A2-211ENST00000496215 FAM205CA6NFA0 338 aa23.27■■□□□ 1.32
COL9A2-211ENST00000496215 M0QZ92 97 aa23.27■■□□□ 1.32
COL9A2-211ENST00000496215 CHRNA1P02708 482 aa23.27■■□□□ 1.32
COL9A2-211ENST00000496215 CA3P07451 260 aa23.27■■□□□ 1.32
COL9A2-211ENST00000496215 FOSL2P15408 326 aa23.27■■□□□ 1.32
COL9A2-211ENST00000496215 ATP4AP20648 1035 aa23.27■■□□□ 1.32
COL9A2-211ENST00000496215 HMGN5P82970 282 aaKnown RBP23.27■■□□□ 1.32
COL9A2-211ENST00000496215 PPP2R2DQ66LE6 453 aa23.27■■□□□ 1.32
COL9A2-211ENST00000496215 MIER3Q7Z3K6 550 aa23.27■■□□□ 1.32
COL9A2-211ENST00000496215 IFIH1Q9BYX4 1025 aaKnown RBP23.27■■□□□ 1.32
COL9A2-211ENST00000496215 CEP131Q9UPN4 1083 aa23.27■■□□□ 1.32
COL9A2-211ENST00000496215 CDY2AQ9Y6F7 541 aa23.27■■□□□ 1.32
COL9A2-211ENST00000496215 SMIM35A0A1B0GVV1 85 aa23.26■■□□□ 1.31
COL9A2-211ENST00000496215 GHRP10912 638 aa23.26■■□□□ 1.31
COL9A2-211ENST00000496215 PRKCEQ02156 737 aa23.26■■□□□ 1.31
COL9A2-211ENST00000496215 ADGRE1Q14246 886 aa23.26■■□□□ 1.31
COL9A2-211ENST00000496215 SAFBQ15424 915 aaKnown RBP eCLIP23.26■■□□□ 1.31
COL9A2-211ENST00000496215 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.26■■□□□ 1.31
COL9A2-211ENST00000496215 TRMT1LQ7Z2T5 733 aaKnown RBP23.26■■□□□ 1.31
COL9A2-211ENST00000496215 IL27Q8NEV9 243 aa23.26■■□□□ 1.31
COL9A2-211ENST00000496215 APBB2Q92870 758 aa23.26■■□□□ 1.31
COL9A2-211ENST00000496215 C8orf76Q96K31 380 aa23.26■■□□□ 1.31
COL9A2-211ENST00000496215 KCNMB3Q9NPA1 279 aa23.26■■□□□ 1.31
COL9A2-211ENST00000496215 LCHNA4D1U4 455 aa23.25■■□□□ 1.31
COL9A2-211ENST00000496215 ZBTB42B2RXF5 422 aa23.25■■□□□ 1.31
COL9A2-211ENST00000496215 BTBD18B2RXH4 712 aa23.25■■□□□ 1.31
COL9A2-211ENST00000496215 KIF28PB7ZC32 967 aa23.25■■□□□ 1.31
COL9A2-211ENST00000496215 OATP04181 439 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms