RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 LRRC8DQ7L1W4 858 aa9.5□□□□□ -0.89
VPS13B-206ENST00000496144 MIER3Q7Z3K6 550 aa9.5□□□□□ -0.89
VPS13B-206ENST00000496144 SEPT1Q8WYJ6 367 aa9.5□□□□□ -0.89
VPS13B-206ENST00000496144 GPRASP2Q96D09 838 aa9.5□□□□□ -0.89
VPS13B-206ENST00000496144 CCDC34Q96HJ3 373 aa9.5□□□□□ -0.89
VPS13B-206ENST00000496144 MAD2L2Q9UI95 211 aa9.5□□□□□ -0.89
VPS13B-206ENST00000496144 V9GY48 417 aaPredicted RBP9.5□□□□□ -0.89
VPS13B-206ENST00000496144 CCDC85BQ15834 202 aaPredicted RBP9.5□□□□□ -0.89
VPS13B-206ENST00000496144 KIAA0753Q2KHM9 967 aa9.5□□□□□ -0.89
VPS13B-206ENST00000496144 RNF169Q8NCN4 708 aa9.5□□□□□ -0.89
VPS13B-206ENST00000496144 FAM49AQ9H0Q0 323 aaPredicted RBP9.5□□□□□ -0.89
VPS13B-206ENST00000496144 HOXA13P31271 388 aaPredicted RBP9.5□□□□□ -0.89
VPS13B-206ENST00000496144 GRIN1Q05586 938 aa9.5□□□□□ -0.89
VPS13B-206ENST00000496144 PTK7Q13308 1070 aa9.5□□□□□ -0.89
VPS13B-206ENST00000496144 NCAPHQ15003 741 aa9.5□□□□□ -0.89
VPS13B-206ENST00000496144 EARS2Q5JPH6 523 aaKnown RBP9.5□□□□□ -0.89
VPS13B-206ENST00000496144 MAP3K21Q5TCX8 1036 aa9.5□□□□□ -0.89
VPS13B-206ENST00000496144 ARNTL2Q8WYA1 636 aa9.5□□□□□ -0.89
VPS13B-206ENST00000496144 TAAR1Q96RJ0 339 aa9.5□□□□□ -0.89
VPS13B-206ENST00000496144 PDLIM7Q9NR12 457 aa9.5□□□□□ -0.89
VPS13B-206ENST00000496144 PXMP2Q9NR77 195 aa9.5□□□□□ -0.89
VPS13B-206ENST00000496144 PCDHA11Q9Y5I1 949 aa9.5□□□□□ -0.89
VPS13B-206ENST00000496144 SIPA1L1O43166 1804 aa9.5□□□□□ -0.89
VPS13B-206ENST00000496144 SKIP12755 728 aa9.5□□□□□ -0.89
VPS13B-206ENST00000496144 TRIM21P19474 475 aaKnown RBP9.5□□□□□ -0.89
VPS13B-206ENST00000496144 CYP2C18P33260 490 aa9.5□□□□□ -0.89
VPS13B-206ENST00000496144 LRIT3Q3SXY7 679 aa9.5□□□□□ -0.89
VPS13B-206ENST00000496144 CNNM3Q8NE01 707 aa9.5□□□□□ -0.89
VPS13B-206ENST00000496144 DRC1Q96MC2 740 aa9.5□□□□□ -0.89
VPS13B-206ENST00000496144 HOOK1Q9UJC3 728 aaKnown RBP9.5□□□□□ -0.89
VPS13B-206ENST00000496144 STXBP5LQ9Y2K9 1186 aa9.5□□□□□ -0.89
VPS13B-206ENST00000496144 SMCO2A6NFE2 343 aa9.49□□□□□ -0.89
VPS13B-206ENST00000496144 ACTN4O43707 911 aaKnown RBP9.49□□□□□ -0.89
VPS13B-206ENST00000496144 LRRC8AQ8IWT6 810 aa9.49□□□□□ -0.89
VPS13B-206ENST00000496144 CSRNP2Q9H175 543 aa9.49□□□□□ -0.89
VPS13B-206ENST00000496144 IMPACTQ9P2X3 320 aa9.49□□□□□ -0.89
VPS13B-206ENST00000496144 PLIN4Q96Q06 1357 aa9.49□□□□□ -0.89
VPS13B-206ENST00000496144 NEMFO60524 1076 aa9.49□□□□□ -0.89
VPS13B-206ENST00000496144 GAS7O60861 476 aa9.49□□□□□ -0.89
VPS13B-206ENST00000496144 CTSHP09668 335 aa9.49□□□□□ -0.89
VPS13B-206ENST00000496144 FTHL17Q9BXU8 183 aa9.49□□□□□ -0.89
VPS13B-206ENST00000496144 HSD3B7Q9H2F3 369 aa9.49□□□□□ -0.89
VPS13B-206ENST00000496144 ZNF576Q9H609 170 aa9.49□□□□□ -0.89
VPS13B-206ENST00000496144 DPP7Q9UHL4 492 aa9.49□□□□□ -0.89
VPS13B-206ENST00000496144 PEX10O60683 326 aa9.49□□□□□ -0.89
VPS13B-206ENST00000496144 PRR29P0C7W0 189 aa9.49□□□□□ -0.89
VPS13B-206ENST00000496144 SCG2P13521 617 aa9.49□□□□□ -0.89
VPS13B-206ENST00000496144 SMARCA1P28370 1054 aa9.49□□□□□ -0.89
VPS13B-206ENST00000496144 PSMC6P62333 389 aa9.49□□□□□ -0.89
VPS13B-206ENST00000496144 FAM109BQ6ICB4 259 aaPredicted RBP9.49□□□□□ -0.89
VPS13B-206ENST00000496144 BTNL9Q6UXG8 535 aa9.49□□□□□ -0.89
VPS13B-206ENST00000496144 REXO1Q8N1G1 1221 aaKnown RBP9.49□□□□□ -0.89
VPS13B-206ENST00000496144 COG5Q9UP83 839 aa9.49□□□□□ -0.89
VPS13B-206ENST00000496144 UQCRHLA0A096LP55 91 aa9.49□□□□□ -0.89
VPS13B-206ENST00000496144 FAM205CA6NFA0 338 aa9.49□□□□□ -0.89
VPS13B-206ENST00000496144 UQCRHP07919 91 aa9.49□□□□□ -0.89
VPS13B-206ENST00000496144 ZNF865P0CJ78 1059 aaPredicted RBP9.49□□□□□ -0.89
VPS13B-206ENST00000496144 JAK3P52333 1124 aa9.49□□□□□ -0.89
VPS13B-206ENST00000496144 NONOQ15233 471 aaKnown RBP eCLIP9.49□□□□□ -0.89
VPS13B-206ENST00000496144 SPECC1Q5M775 1068 aa9.49□□□□□ -0.89
VPS13B-206ENST00000496144 GALNT17Q6IS24 598 aa9.49□□□□□ -0.89
VPS13B-206ENST00000496144 ZNF365Q70YC5 407 aa9.49□□□□□ -0.89
VPS13B-206ENST00000496144 TBC1D22BQ9NU19 505 aa9.49□□□□□ -0.89
VPS13B-206ENST00000496144 MAN1B1Q9UKM7 699 aa9.49□□□□□ -0.89
VPS13B-206ENST00000496144 BIN1O00499 593 aa9.48□□□□□ -0.89
VPS13B-206ENST00000496144 GPR182O15218 404 aa9.48□□□□□ -0.89
VPS13B-206ENST00000496144 BMP15O95972 392 aa9.48□□□□□ -0.89
VPS13B-206ENST00000496144 KRT18P05783 430 aaKnown RBP9.48□□□□□ -0.89
VPS13B-206ENST00000496144 SMPD1P17405 629 aa9.48□□□□□ -0.89
VPS13B-206ENST00000496144 CTNNB1P35222 781 aa9.48□□□□□ -0.89
VPS13B-206ENST00000496144 SARSP49591 514 aaKnown RBP9.48□□□□□ -0.89
VPS13B-206ENST00000496144 POSTNQ15063 836 aa9.48□□□□□ -0.89
VPS13B-206ENST00000496144 MUM1L1Q5H9M0 696 aa9.48□□□□□ -0.89
VPS13B-206ENST00000496144 TRMT1LQ7Z2T5 733 aaKnown RBP9.48□□□□□ -0.89
VPS13B-206ENST00000496144 KRT25Q7Z3Z0 450 aa9.48□□□□□ -0.89
VPS13B-206ENST00000496144 POP1Q99575 1024 aaKnown RBP9.48□□□□□ -0.89
VPS13B-206ENST00000496144 KCND1Q9NSA2 647 aa9.48□□□□□ -0.89
VPS13B-206ENST00000496144 ZNF214Q9UL59 606 aaPredicted RBP9.48□□□□□ -0.89
VPS13B-206ENST00000496144 CYP2C9P11712 490 aa9.48□□□□□ -0.89
VPS13B-206ENST00000496144 USP6NLQ92738 828 aa9.48□□□□□ -0.89
VPS13B-206ENST00000496144 TGS1Q96RS0 853 aaKnown RBP9.48□□□□□ -0.89
VPS13B-206ENST00000496144 ZNF577Q9BSK1 485 aa9.48□□□□□ -0.89
VPS13B-206ENST00000496144 SLC9A2Q9UBY0 812 aa9.48□□□□□ -0.89
VPS13B-206ENST00000496144 hCG_1642624A0A1W2PR95 340 aa9.48□□□□□ -0.89
VPS13B-206ENST00000496144 MARK3P27448 753 aa9.48□□□□□ -0.89
VPS13B-206ENST00000496144 PDXDC2PQ6P474 469 aa9.48□□□□□ -0.89
VPS13B-206ENST00000496144 PRIMPOLQ96LW4 560 aa9.48□□□□□ -0.89
VPS13B-206ENST00000496144 ATP6V0A4Q9HBG4 840 aa9.48□□□□□ -0.89
VPS13B-206ENST00000496144 ZNF302Q9NR11 478 aa9.48□□□□□ -0.89
VPS13B-206ENST00000496144 SERTAD1Q9UHV2 236 aa9.48□□□□□ -0.89
VPS13B-206ENST00000496144 BTG3Q14201 252 aaPredicted RBP9.48□□□□□ -0.89
VPS13B-206ENST00000496144 KANK3Q6NY19 840 aa9.48□□□□□ -0.89
VPS13B-206ENST00000496144 FAM133AQ8N9E0 248 aa9.48□□□□□ -0.89
VPS13B-206ENST00000496144 NLRP7Q8WX94 980 aa9.48□□□□□ -0.89
VPS13B-206ENST00000496144 KCNG1Q9UIX4 513 aa9.48□□□□□ -0.89
VPS13B-206ENST00000496144 MAGEB2O15479 319 aa9.47□□□□□ -0.89
VPS13B-206ENST00000496144 LGR5O75473 907 aa9.47□□□□□ -0.89
VPS13B-206ENST00000496144 KRT76Q01546 638 aa9.47□□□□□ -0.89
VPS13B-206ENST00000496144 SLC30A10Q6XR72 485 aa9.47□□□□□ -0.89
VPS13B-206ENST00000496144 THNSL1Q8IYQ7 743 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms