RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, human

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-A-208	ENST00000496081	ZCWPW2	Q504Y3	356 aa		18.15	■□□□□ 0.5
HLA-A-208	ENST00000496081	SPECC1L	Q69YQ0	1117 aa		18.15	■□□□□ 0.5
HLA-A-208	ENST00000496081	ARMCX5	Q6P1M9	558 aa		18.15	■□□□□ 0.5
HLA-A-208	ENST00000496081	SMAP1	Q8IYB5	467 aa	Predicted RBP	18.15	■□□□□ 0.5
HLA-A-208	ENST00000496081	SMC1B	Q8NDV3	1235 aa		18.15	■□□□□ 0.5
HLA-A-208	ENST00000496081	FGD4	Q96M96	766 aa		18.15	■□□□□ 0.5
HLA-A-208	ENST00000496081	MMP19	Q99542	508 aa		18.15	■□□□□ 0.5
HLA-A-208	ENST00000496081	PORCN	Q9H237	461 aa		18.15	■□□□□ 0.5
HLA-A-208	ENST00000496081	JPH1	Q9HDC5	661 aa	Predicted RBP	18.15	■□□□□ 0.5
HLA-A-208	ENST00000496081	SLC9A2	Q9UBY0	812 aa		18.15	■□□□□ 0.5
HLA-A-208	ENST00000496081	WDR81	Q562E7	1941 aa		18.15	■□□□□ 0.5
HLA-A-208	ENST00000496081	SFI1	A8K8P3	1242 aa		18.14	■□□□□ 0.5
HLA-A-208	ENST00000496081	GAP43	P17677	238 aa		18.14	■□□□□ 0.5
HLA-A-208	ENST00000496081	PBX1	P40424	430 aa		18.14	■□□□□ 0.5
HLA-A-208	ENST00000496081	TBX2	Q13207	712 aa	Predicted RBP	18.14	■□□□□ 0.5
HLA-A-208	ENST00000496081	SEPT14	Q6ZU15	432 aa		18.14	■□□□□ 0.5
HLA-A-208	ENST00000496081	EPM2AIP1	Q7L775	607 aa	Predicted RBP	18.14	■□□□□ 0.5
HLA-A-208	ENST00000496081	GPRC5A	Q8NFJ5	357 aa		18.14	■□□□□ 0.5
HLA-A-208	ENST00000496081	OLFML3	Q9NRN5	406 aa		18.14	■□□□□ 0.5
HLA-A-208	ENST00000496081	MAGEC2	Q9UBF1	373 aa	Predicted RBP	18.14	■□□□□ 0.5
HLA-A-208	ENST00000496081	TELO2	Q9Y4R8	837 aa		18.14	■□□□□ 0.5
HLA-A-208	ENST00000496081	LRRC37A2	A6NM11	1700 aa		18.14	■□□□□ 0.49
HLA-A-208	ENST00000496081	ZNFX1	Q9P2E3	1918 aa	Known RBP	18.14	■□□□□ 0.49
HLA-A-208	ENST00000496081	N4BP3	O15049	544 aa		18.14	■□□□□ 0.49
HLA-A-208	ENST00000496081	FAM13A	O94988	1023 aa		18.14	■□□□□ 0.49
HLA-A-208	ENST00000496081	KIF20A	O95235	890 aa		18.14	■□□□□ 0.49
HLA-A-208	ENST00000496081	GUCY2C	P25092	1073 aa		18.14	■□□□□ 0.49
HLA-A-208	ENST00000496081	YWHAB	P31946	246 aa	Known RBP	18.14	■□□□□ 0.49
HLA-A-208	ENST00000496081	RARRES1	P49788	294 aa		18.14	■□□□□ 0.49
HLA-A-208	ENST00000496081	WDR78	Q5VTH9	848 aa		18.14	■□□□□ 0.49
HLA-A-208	ENST00000496081	PADI6	Q6TGC4	694 aa		18.14	■□□□□ 0.49
HLA-A-208	ENST00000496081	FAM114A1	Q8IWE2	563 aa		18.14	■□□□□ 0.49
HLA-A-208	ENST00000496081	NELFCD	Q8IXH7	590 aa		18.14	■□□□□ 0.49
HLA-A-208	ENST00000496081	TSG101	Q99816	390 aa		18.14	■□□□□ 0.49
HLA-A-208	ENST00000496081	KCTD10	Q9H3F6	313 aa		18.14	■□□□□ 0.49
HLA-A-208	ENST00000496081	EFCC1	Q9HA90	598 aa		18.14	■□□□□ 0.49
HLA-A-208	ENST00000496081	ODF2L	Q9ULJ1	636 aa		18.14	■□□□□ 0.49
HLA-A-208	ENST00000496081	TRPM7	Q96QT4	1865 aa		18.14	■□□□□ 0.49
HLA-A-208	ENST00000496081	CLCN1	P35523	988 aa		18.13	■□□□□ 0.49
HLA-A-208	ENST00000496081	ZNF131	P52739	623 aa		18.13	■□□□□ 0.49
HLA-A-208	ENST00000496081	ACTR2	P61160	394 aa		18.13	■□□□□ 0.49
HLA-A-208	ENST00000496081	ANKRD13C	Q8N6S4	541 aa		18.13	■□□□□ 0.49
HLA-A-208	ENST00000496081	CCDC150	Q8NCX0	1101 aa		18.13	■□□□□ 0.49
HLA-A-208	ENST00000496081	KIAA1524	Q8TCG1	905 aa		18.13	■□□□□ 0.49
HLA-A-208	ENST00000496081	CNOT6L	Q96LI5	555 aa	Known RBP	18.13	■□□□□ 0.49
HLA-A-208	ENST00000496081	PTPN18	Q99952	460 aa		18.13	■□□□□ 0.49
HLA-A-208	ENST00000496081	TMEM150B	A6NC51	233 aa		18.12	■□□□□ 0.49
HLA-A-208	ENST00000496081		B4DLN1	442 aa		18.12	■□□□□ 0.49
HLA-A-208	ENST00000496081	SORBS3	O60504	671 aa		18.12	■□□□□ 0.49
HLA-A-208	ENST00000496081	MYB	P10242	640 aa		18.12	■□□□□ 0.49
HLA-A-208	ENST00000496081	HUNK	P57058	714 aa		18.12	■□□□□ 0.49
HLA-A-208	ENST00000496081	SP4	Q02446	784 aa		18.12	■□□□□ 0.49
HLA-A-208	ENST00000496081	MAPK7	Q13164	816 aa		18.12	■□□□□ 0.49
HLA-A-208	ENST00000496081	ABHD15	Q6UXT9	468 aa		18.12	■□□□□ 0.49
HLA-A-208	ENST00000496081	LRRC55	Q6ZSA7	311 aa		18.12	■□□□□ 0.49
HLA-A-208	ENST00000496081	MYCT1	Q8N699	235 aa		18.12	■□□□□ 0.49
HLA-A-208	ENST00000496081	MRPL44	Q9H9J2	332 aa	Known RBP	18.12	■□□□□ 0.49
HLA-A-208	ENST00000496081	PARVG	Q9HBI0	331 aa		18.12	■□□□□ 0.49
HLA-A-208	ENST00000496081	GABBR1	Q9UBS5	961 aa		18.12	■□□□□ 0.49
HLA-A-208	ENST00000496081	PSAP	P07602	524 aa		18.12	■□□□□ 0.49
HLA-A-208	ENST00000496081	SFPQ	P23246	707 aa	Known RBP eCLIP	18.12	■□□□□ 0.49
HLA-A-208	ENST00000496081	CCNA1	P78396	465 aa		18.12	■□□□□ 0.49
HLA-A-208	ENST00000496081	CCZ1B	P86790	482 aa		18.12	■□□□□ 0.49
HLA-A-208	ENST00000496081	CCZ1	P86791	482 aa	Predicted RBP	18.12	■□□□□ 0.49
HLA-A-208	ENST00000496081	UTP14C	Q5TAP6	766 aa	Known RBP	18.12	■□□□□ 0.49
HLA-A-208	ENST00000496081	CYFIP1	Q7L576	1253 aa		18.12	■□□□□ 0.49
HLA-A-208	ENST00000496081	DAW1	Q8N136	415 aa		18.12	■□□□□ 0.49
HLA-A-208	ENST00000496081	TUBGCP2	Q9BSJ2	902 aa		18.12	■□□□□ 0.49
HLA-A-208	ENST00000496081	ANKEF1	Q9NU02	776 aa		18.12	■□□□□ 0.49
HLA-A-208	ENST00000496081	MORF4L1	Q9UBU8	362 aa		18.12	■□□□□ 0.49
HLA-A-208	ENST00000496081	SEL1L	Q9UBV2	794 aa		18.12	■□□□□ 0.49
HLA-A-208	ENST00000496081	MYH11	P35749	1972 aa		18.11	■□□□□ 0.49
HLA-A-208	ENST00000496081	ZNF862	O60290	1169 aa		18.11	■□□□□ 0.49
HLA-A-208	ENST00000496081	HIP1R	O75146	1068 aa		18.11	■□□□□ 0.49
HLA-A-208	ENST00000496081	FGFR1OP	O95684	399 aa	Known RBP	18.11	■□□□□ 0.49
HLA-A-208	ENST00000496081	HOXD13	P35453	343 aa		18.11	■□□□□ 0.49
HLA-A-208	ENST00000496081	GCLC	P48506	637 aa	Predicted RBP	18.11	■□□□□ 0.49
HLA-A-208	ENST00000496081	BMT2	Q1RMZ1	405 aa		18.11	■□□□□ 0.49
HLA-A-208	ENST00000496081	SWSAP1	Q6NVH7	229 aa		18.11	■□□□□ 0.49
HLA-A-208	ENST00000496081	ANO5	Q75V66	913 aa		18.11	■□□□□ 0.49
HLA-A-208	ENST00000496081	C17orf53	Q8N3J3	647 aa	Predicted RBP	18.11	■□□□□ 0.49
HLA-A-208	ENST00000496081	ZNF507	Q8TCN5	953 aa		18.11	■□□□□ 0.49
HLA-A-208	ENST00000496081	ATP6V0A1	Q93050	837 aa		18.11	■□□□□ 0.49
HLA-A-208	ENST00000496081	FIZ1	Q96SL8	496 aa		18.11	■□□□□ 0.49
HLA-A-208	ENST00000496081	MPHOSPH6	Q99547	160 aa	Known RBP	18.11	■□□□□ 0.49
HLA-A-208	ENST00000496081	SH2D3A	Q9BRG2	576 aa		18.11	■□□□□ 0.49
HLA-A-208	ENST00000496081	LGALS16	A8MUM7	142 aa		18.1	■□□□□ 0.49
HLA-A-208	ENST00000496081	BACH1	O14867	736 aa		18.1	■□□□□ 0.49
HLA-A-208	ENST00000496081	NKRF	O15226	690 aa	Known RBP eCLIP	18.1	■□□□□ 0.49
HLA-A-208	ENST00000496081	PRPF6	O94906	941 aa	Known RBP	18.1	■□□□□ 0.49
HLA-A-208	ENST00000496081	STBD1	O95210	358 aa		18.1	■□□□□ 0.49
HLA-A-208	ENST00000496081	GCNT3	O95395	438 aa		18.1	■□□□□ 0.49
HLA-A-208	ENST00000496081	SKIL	P12757	684 aa		18.1	■□□□□ 0.49
HLA-A-208	ENST00000496081	UBA1	P22314	1058 aa	Known RBP	18.1	■□□□□ 0.49
HLA-A-208	ENST00000496081	FKBP3	Q00688	224 aa	Known RBP	18.1	■□□□□ 0.49
HLA-A-208	ENST00000496081	MIS18BP1	Q6P0N0	1132 aa		18.1	■□□□□ 0.49
HLA-A-208	ENST00000496081	EEPD1	Q7L9B9	569 aa		18.1	■□□□□ 0.49
HLA-A-208	ENST00000496081	TRMT1L	Q7Z2T5	733 aa	Known RBP	18.1	■□□□□ 0.49
HLA-A-208	ENST00000496081	CCDC60	Q8IWA6	550 aa	Predicted RBP	18.1	■□□□□ 0.49
HLA-A-208	ENST00000496081	USO1	O60763	962 aa	Known RBP	18.09	■□□□□ 0.49

Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms