RNA–Protein interactions for RNA: ENST00000495755.1

VPS52-221, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-221ENST00000495755 MTHFD1LQ6UB35 978 aa8.19□□□□□ -1.1
VPS52-221ENST00000495755 CCDC60Q8IWA6 550 aaPredicted RBP8.19□□□□□ -1.1
VPS52-221ENST00000495755 MYOCDQ8IZQ8 938 aa8.19□□□□□ -1.1
VPS52-221ENST00000495755 FAM177A1Q8N128 213 aaPredicted RBP8.19□□□□□ -1.1
VPS52-221ENST00000495755 NME8Q8N427 588 aa8.19□□□□□ -1.1
VPS52-221ENST00000495755 ATP8B4Q8TF62 1192 aa8.19□□□□□ -1.1
VPS52-221ENST00000495755 TRAPPC12Q8WVT3 735 aa8.19□□□□□ -1.1
VPS52-221ENST00000495755 IL17RAQ96F46 866 aa8.19□□□□□ -1.1
VPS52-221ENST00000495755 UIMC1Q96RL1 719 aa8.19□□□□□ -1.1
VPS52-221ENST00000495755 TGS1Q96RS0 853 aaKnown RBP8.19□□□□□ -1.1
VPS52-221ENST00000495755 IFIH1Q9BYX4 1025 aaKnown RBP8.19□□□□□ -1.1
VPS52-221ENST00000495755 ZNF302Q9NR11 478 aa8.19□□□□□ -1.1
VPS52-221ENST00000495755 PCDHA4Q9UN74 947 aa8.19□□□□□ -1.1
VPS52-221ENST00000495755 TRPC6Q9Y210 931 aa8.19□□□□□ -1.1
VPS52-221ENST00000495755 MAFBQ9Y5Q3 323 aaPredicted RBP8.19□□□□□ -1.1
VPS52-221ENST00000495755 CDY2AQ9Y6F7 541 aa8.19□□□□□ -1.1
VPS52-221ENST00000495755 CYP3A7-CYP3A51PA0A087WV96 503 aa8.18□□□□□ -1.1
VPS52-221ENST00000495755 SMIM35A0A1B0GVV1 85 aa8.18□□□□□ -1.1
VPS52-221ENST00000495755 ZBTB42B2RXF5 422 aa8.18□□□□□ -1.1
VPS52-221ENST00000495755 ENPP3O14638 875 aa8.18□□□□□ -1.1
VPS52-221ENST00000495755 BACH1O14867 736 aa8.18□□□□□ -1.1
VPS52-221ENST00000495755 MSH4O15457 936 aa8.18□□□□□ -1.1
VPS52-221ENST00000495755 HBP1O60381 514 aa8.18□□□□□ -1.1
VPS52-221ENST00000495755 PFKFB2O60825 505 aa8.18□□□□□ -1.1
VPS52-221ENST00000495755 CYP3A7P24462 503 aa8.18□□□□□ -1.1
VPS52-221ENST00000495755 KLRC1P26715 233 aa8.18□□□□□ -1.1
VPS52-221ENST00000495755 KRT76Q01546 638 aa8.18□□□□□ -1.1
VPS52-221ENST00000495755 SCRN1Q12765 414 aa8.18□□□□□ -1.1
VPS52-221ENST00000495755 ZNF484Q5JVG2 852 aa8.18□□□□□ -1.1
VPS52-221ENST00000495755 IER5Q5VY09 327 aa8.18□□□□□ -1.1
VPS52-221ENST00000495755 KRT40Q6A162 431 aa8.18□□□□□ -1.1
VPS52-221ENST00000495755 GALNT17Q6IS24 598 aa8.18□□□□□ -1.1
VPS52-221ENST00000495755 PDXDC2PQ6P474 469 aa8.18□□□□□ -1.1
VPS52-221ENST00000495755 CPLX2Q6PUV4 134 aaKnown RBP8.18□□□□□ -1.1
VPS52-221ENST00000495755 TSHZ1Q6ZSZ6 1077 aa8.18□□□□□ -1.1
VPS52-221ENST00000495755 SMAP1Q8IYB5 467 aaPredicted RBP8.18□□□□□ -1.1
VPS52-221ENST00000495755 KIAA0319LQ8IZA0 1049 aa8.18□□□□□ -1.1
VPS52-221ENST00000495755 DAGLBQ8NCG7 672 aa8.18□□□□□ -1.1
VPS52-221ENST00000495755 TBCKQ8TEA7 893 aa8.18□□□□□ -1.1
VPS52-221ENST00000495755 ATXN2LQ8WWM7 1075 aaKnown RBP8.18□□□□□ -1.1
VPS52-221ENST00000495755 SLC5A5Q92911 643 aa8.18□□□□□ -1.1
VPS52-221ENST00000495755 AIFM3Q96NN9 605 aa8.18□□□□□ -1.1
VPS52-221ENST00000495755 RIT2Q99578 217 aa8.18□□□□□ -1.1
VPS52-221ENST00000495755 C22orf23Q9BZE7 217 aa8.18□□□□□ -1.1
VPS52-221ENST00000495755 FAM49AQ9H0Q0 323 aaPredicted RBP8.18□□□□□ -1.1
VPS52-221ENST00000495755 AGO3Q9H9G7 860 aaKnown RBP8.18□□□□□ -1.1
VPS52-221ENST00000495755 SUGCTQ9HAC7 445 aa8.18□□□□□ -1.1
VPS52-221ENST00000495755 LMCD1Q9NZU5 365 aa8.18□□□□□ -1.1
VPS52-221ENST00000495755 TPCN1Q9ULQ1 816 aa8.18□□□□□ -1.1
VPS52-221ENST00000495755 PCDHA10Q9Y5I2 948 aa8.18□□□□□ -1.1
VPS52-221ENST00000495755 SQORQ9Y6N5 450 aa8.18□□□□□ -1.1
VPS52-221ENST00000495755 KAT6AQ92794 2004 aa8.18□□□□□ -1.1
VPS52-221ENST00000495755 MICAL3Q7RTP6 2002 aa8.17□□□□□ -1.1
VPS52-221ENST00000495755 GTPBP6O43824 516 aaPredicted RBP8.17□□□□□ -1.1
VPS52-221ENST00000495755 UPP2O95045 317 aa8.17□□□□□ -1.1
VPS52-221ENST00000495755 CTDNEP1O95476 244 aa8.17□□□□□ -1.1
VPS52-221ENST00000495755 PSAPP07602 524 aa8.17□□□□□ -1.1
VPS52-221ENST00000495755 CD52P31358 61 aa8.17□□□□□ -1.1
VPS52-221ENST00000495755 TMEM62Q0P6H9 643 aa8.17□□□□□ -1.1
VPS52-221ENST00000495755 ANKRD1Q15327 319 aa8.17□□□□□ -1.1
VPS52-221ENST00000495755 Q4G0T1 1027 aa8.17□□□□□ -1.1
VPS52-221ENST00000495755 TJAP1Q5JTD0 557 aa8.17□□□□□ -1.1
VPS52-221ENST00000495755 RTN4RL1Q86UN2 441 aaPredicted RBP8.17□□□□□ -1.1
VPS52-221ENST00000495755 BLIDQ8IZY5 108 aa8.17□□□□□ -1.1
VPS52-221ENST00000495755 CRIPAKQ8N1N5 446 aa8.17□□□□□ -1.1
VPS52-221ENST00000495755 MICALL1Q8N3F8 863 aa8.17□□□□□ -1.1
VPS52-221ENST00000495755 LINC01599Q8WXQ3 324 aa8.17□□□□□ -1.1
VPS52-221ENST00000495755 SYMPKQ92797 1274 aaKnown RBP8.17□□□□□ -1.1
VPS52-221ENST00000495755 MBOAT7Q96N66 472 aa8.17□□□□□ -1.1
VPS52-221ENST00000495755 ASB2Q96Q27 587 aa8.17□□□□□ -1.1
VPS52-221ENST00000495755 C17orf80Q9BSJ5 609 aa8.17□□□□□ -1.1
VPS52-221ENST00000495755 PHF20Q9BVI0 1012 aa8.17□□□□□ -1.1
VPS52-221ENST00000495755 CELF4Q9BZC1 486 aaKnown RBP8.17□□□□□ -1.1
VPS52-221ENST00000495755 SLKQ9H2G2 1235 aaPredicted RBP8.17□□□□□ -1.1
VPS52-221ENST00000495755 THEGQ9P2T0 379 aa8.17□□□□□ -1.1
VPS52-221ENST00000495755 GABBR1Q9UBS5 961 aa8.17□□□□□ -1.1
VPS52-221ENST00000495755 PADI3Q9ULW8 664 aa8.17□□□□□ -1.1
VPS52-221ENST00000495755 TRPV2Q9Y5S1 764 aa8.17□□□□□ -1.1
VPS52-221ENST00000495755 STK36Q9NRP7 1315 aa8.17□□□□□ -1.1
VPS52-221ENST00000495755 KDM3AQ9Y4C1 1321 aa8.17□□□□□ -1.1
VPS52-221ENST00000495755 COL1A2P08123 1366 aa8.17□□□□□ -1.1
VPS52-221ENST00000495755 PRRC2BQ5JSZ5 2229 aaKnown RBP8.17□□□□□ -1.1
VPS52-221ENST00000495755 WDR64B1ANS9 1081 aa8.16□□□□□ -1.1
VPS52-221ENST00000495755 M0QZ92 97 aa8.16□□□□□ -1.1
VPS52-221ENST00000495755 PSMD10O75832 226 aa8.16□□□□□ -1.1
VPS52-221ENST00000495755 CDKL5O76039 1030 aa8.16□□□□□ -1.1
VPS52-221ENST00000495755 SEC24BO95487 1268 aa8.16□□□□□ -1.1
VPS52-221ENST00000495755 TDP2O95551 362 aa8.16□□□□□ -1.1
VPS52-221ENST00000495755 C22orf31O95567 290 aa8.16□□□□□ -1.1
VPS52-221ENST00000495755 SIP14410 1827 aa8.16□□□□□ -1.1
VPS52-221ENST00000495755 AK2P54819 239 aa8.16□□□□□ -1.1
VPS52-221ENST00000495755 MRPS5P82675 430 aaKnown RBP8.16□□□□□ -1.1
VPS52-221ENST00000495755 COL4A6Q14031 1691 aa8.16□□□□□ -1.1
VPS52-221ENST00000495755 MOXD1Q6UVY6 613 aa8.16□□□□□ -1.1
VPS52-221ENST00000495755 B3GNT9Q6UX72 402 aa8.16□□□□□ -1.1
VPS52-221ENST00000495755 FAM43BQ6ZT52 329 aaPredicted RBP8.16□□□□□ -1.1
VPS52-221ENST00000495755 CKAP2LQ8IYA6 745 aa8.16□□□□□ -1.1
VPS52-221ENST00000495755 GDPD5Q8WTR4 605 aa8.16□□□□□ -1.1
VPS52-221ENST00000495755 BBXQ8WY36 941 aaPredicted RBP8.16□□□□□ -1.1
VPS52-221ENST00000495755 GJA10Q969M2 543 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms