RNA–Protein interactions for RNA: ENST00000495643.1

DCTN1-223, Transcript of dynactin subunit 1, human

TSL 3

Gene DCTN1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DCTN1-223	ENST00000495643	NONO	Q15233	471 aa	Known RBP eCLIP	12.4	□□□□□ -0.42
DCTN1-223	ENST00000495643	INF2	Q27J81	1249 aa		12.4	□□□□□ -0.42
DCTN1-223	ENST00000495643	PDXDC2P	Q6P474	469 aa		12.4	□□□□□ -0.42
DCTN1-223	ENST00000495643	MOXD1	Q6UVY6	613 aa		12.4	□□□□□ -0.42
DCTN1-223	ENST00000495643	ATP8B4	Q8TF62	1192 aa		12.4	□□□□□ -0.42
DCTN1-223	ENST00000495643	DNAJB3	Q8WWF6	145 aa		12.4	□□□□□ -0.42
DCTN1-223	ENST00000495643	WASF1	Q92558	559 aa		12.4	□□□□□ -0.42
DCTN1-223	ENST00000495643	PCDHA2	Q9Y5H9	948 aa		12.4	□□□□□ -0.42
DCTN1-223	ENST00000495643	MYO9B	Q13459	2157 aa		12.4	□□□□□ -0.42
DCTN1-223	ENST00000495643	EVPL	Q92817	2033 aa		12.4	□□□□□ -0.42
DCTN1-223	ENST00000495643	HBP1	O60381	514 aa		12.39	□□□□□ -0.43
DCTN1-223	ENST00000495643	PSMD10	O75832	226 aa		12.39	□□□□□ -0.43
DCTN1-223	ENST00000495643	RPLP2	P05387	115 aa	Known RBP	12.39	□□□□□ -0.43
DCTN1-223	ENST00000495643	CA3	P07451	260 aa		12.39	□□□□□ -0.43
DCTN1-223	ENST00000495643	PSAP	P07602	524 aa		12.39	□□□□□ -0.43
DCTN1-223	ENST00000495643	RBM25	P49756	843 aa	Known RBP	12.39	□□□□□ -0.43
DCTN1-223	ENST00000495643	LRCH2	Q5VUJ6	765 aa		12.39	□□□□□ -0.43
DCTN1-223	ENST00000495643	MTHFD1L	Q6UB35	978 aa		12.39	□□□□□ -0.43
DCTN1-223	ENST00000495643	B3GNT9	Q6UX72	402 aa		12.39	□□□□□ -0.43
DCTN1-223	ENST00000495643	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	12.39	□□□□□ -0.43	4e-6	■□□□□ 11.3
DCTN1-223	ENST00000495643	TMCO2	Q7Z6W1	182 aa	Predicted RBP	12.39	□□□□□ -0.43
DCTN1-223	ENST00000495643	RSPH3	Q86UC2	560 aa		12.39	□□□□□ -0.43
DCTN1-223	ENST00000495643	ETNPPL	Q8TBG4	499 aa		12.39	□□□□□ -0.43
DCTN1-223	ENST00000495643	SEPT8	Q92599	483 aa		12.39	□□□□□ -0.43
DCTN1-223	ENST00000495643	GJA10	Q969M2	543 aa		12.39	□□□□□ -0.43
DCTN1-223	ENST00000495643	PRDM12	Q9H4Q4	367 aa		12.39	□□□□□ -0.43
DCTN1-223	ENST00000495643	LIMCH1	Q9UPQ0	1083 aa		12.39	□□□□□ -0.43
DCTN1-223	ENST00000495643	COL1A2	P08123	1366 aa		12.39	□□□□□ -0.43
DCTN1-223	ENST00000495643	UNC80	Q8N2C7	3258 aa		12.39	□□□□□ -0.43
DCTN1-223	ENST00000495643	REV3L	O60673	3130 aa		12.39	□□□□□ -0.43
DCTN1-223	ENST00000495643		A0A0C4DFX4	3053 aa		12.39	□□□□□ -0.43
DCTN1-223	ENST00000495643	CCDC194	A0A1B0GVG4	234 aa		12.38	□□□□□ -0.43
DCTN1-223	ENST00000495643	SMIM35	A0A1B0GVV1	85 aa		12.38	□□□□□ -0.43
DCTN1-223	ENST00000495643	WDR64	B1ANS9	1081 aa		12.38	□□□□□ -0.43
DCTN1-223	ENST00000495643	KIF28P	B7ZC32	967 aa		12.38	□□□□□ -0.43
DCTN1-223	ENST00000495643	JAK2	O60674	1132 aa		12.38	□□□□□ -0.43
DCTN1-223	ENST00000495643	GAS7	O60861	476 aa		12.38	□□□□□ -0.43
DCTN1-223	ENST00000495643	ARHGEF15	O94989	841 aa		12.38	□□□□□ -0.43
DCTN1-223	ENST00000495643	GJB5	O95377	273 aa		12.38	□□□□□ -0.43
DCTN1-223	ENST00000495643	FOSL2	P15408	326 aa		12.38	□□□□□ -0.43
DCTN1-223	ENST00000495643	MRPS6	P82932	125 aa	Known RBP	12.38	□□□□□ -0.43
DCTN1-223	ENST00000495643	LPIN1	Q14693	890 aa		12.38	□□□□□ -0.43
DCTN1-223	ENST00000495643	EARS2	Q5JPH6	523 aa	Known RBP	12.38	□□□□□ -0.43
DCTN1-223	ENST00000495643	ZNF484	Q5JVG2	852 aa		12.38	□□□□□ -0.43
DCTN1-223	ENST00000495643	PPP2R2D	Q66LE6	453 aa		12.38	□□□□□ -0.43
DCTN1-223	ENST00000495643	BBX	Q8WY36	941 aa	Predicted RBP	12.38	□□□□□ -0.43
DCTN1-223	ENST00000495643	TNFRSF25	Q93038	417 aa		12.38	□□□□□ -0.43
DCTN1-223	ENST00000495643	TEKT3	Q9BXF9	490 aa		12.38	□□□□□ -0.43
DCTN1-223	ENST00000495643	FAM49A	Q9H0Q0	323 aa	Predicted RBP	12.38	□□□□□ -0.43
DCTN1-223	ENST00000495643	UNC45A	Q9H3U1	944 aa		12.38	□□□□□ -0.43
DCTN1-223	ENST00000495643	DISC1	Q9NRI5	854 aa		12.38	□□□□□ -0.43
DCTN1-223	ENST00000495643	GABBR1	Q9UBS5	961 aa		12.38	□□□□□ -0.43
DCTN1-223	ENST00000495643	SAMM50	Q9Y512	469 aa		12.38	□□□□□ -0.43
DCTN1-223	ENST00000495643	CDY2A	Q9Y6F7	541 aa		12.38	□□□□□ -0.43
DCTN1-223	ENST00000495643	IGSF9B	Q9UPX0	1349 aa		12.37	□□□□□ -0.43
DCTN1-223	ENST00000495643	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	12.37	□□□□□ -0.43
DCTN1-223	ENST00000495643	LCHN	A4D1U4	455 aa		12.37	□□□□□ -0.43
DCTN1-223	ENST00000495643	SLC37A4	O43826	429 aa		12.37	□□□□□ -0.43
DCTN1-223	ENST00000495643	TLL1	O43897	1013 aa		12.37	□□□□□ -0.43
DCTN1-223	ENST00000495643	ZNF862	O60290	1169 aa		12.37	□□□□□ -0.43
DCTN1-223	ENST00000495643	GHR	P10912	638 aa		12.37	□□□□□ -0.43
DCTN1-223	ENST00000495643	KLRC1	P26715	233 aa		12.37	□□□□□ -0.43
DCTN1-223	ENST00000495643	SFN	P31947	248 aa		12.37	□□□□□ -0.43
DCTN1-223	ENST00000495643	TAP1	Q03518	808 aa		12.37	□□□□□ -0.43
DCTN1-223	ENST00000495643	NR5A1	Q13285	461 aa		12.37	□□□□□ -0.43
DCTN1-223	ENST00000495643	UGCG	Q16739	394 aa		12.37	□□□□□ -0.43
DCTN1-223	ENST00000495643	LETM2	Q2VYF4	491 aa		12.37	□□□□□ -0.43
DCTN1-223	ENST00000495643	FBXO47	Q5MNV8	452 aa		12.37	□□□□□ -0.43
DCTN1-223	ENST00000495643	IER5	Q5VY09	327 aa		12.37	□□□□□ -0.43
DCTN1-223	ENST00000495643	PPP4R3A	Q6IN85	833 aa		12.37	□□□□□ -0.43
DCTN1-223	ENST00000495643	PIK3AP1	Q6ZUJ8	805 aa		12.37	□□□□□ -0.43
DCTN1-223	ENST00000495643	NEK8	Q86SG6	692 aa		12.37	□□□□□ -0.43
DCTN1-223	ENST00000495643	KIAA0319L	Q8IZA0	1049 aa		12.37	□□□□□ -0.43
DCTN1-223	ENST00000495643	NME8	Q8N427	588 aa		12.37	□□□□□ -0.43
DCTN1-223	ENST00000495643	RDM1	Q8NG50	284 aa		12.37	□□□□□ -0.43
DCTN1-223	ENST00000495643	MAFA	Q8NHW3	353 aa	Predicted RBP	12.37	□□□□□ -0.43
DCTN1-223	ENST00000495643	APBB2	Q92870	758 aa		12.37	□□□□□ -0.43
DCTN1-223	ENST00000495643	RAD9A	Q99638	391 aa		12.37	□□□□□ -0.43
DCTN1-223	ENST00000495643	IFIH1	Q9BYX4	1025 aa	Known RBP	12.37	□□□□□ -0.43
DCTN1-223	ENST00000495643	KCNMB3	Q9NPA1	279 aa		12.37	□□□□□ -0.43
DCTN1-223	ENST00000495643	DDX25	Q9UHL0	483 aa	Known RBP	12.37	□□□□□ -0.43
DCTN1-223	ENST00000495643	TCEAL9	Q9UHQ7	104 aa		12.37	□□□□□ -0.43
DCTN1-223	ENST00000495643	SQOR	Q9Y6N5	450 aa		12.37	□□□□□ -0.43
DCTN1-223	ENST00000495643	FAM205C	A6NFA0	338 aa		12.36	□□□□□ -0.43
DCTN1-223	ENST00000495643	CHMP2A	O43633	222 aa		12.36	□□□□□ -0.43
DCTN1-223	ENST00000495643	C22orf31	O95567	290 aa		12.36	□□□□□ -0.43
DCTN1-223	ENST00000495643	MMP1	P03956	469 aa		12.36	□□□□□ -0.43
DCTN1-223	ENST00000495643	AMH	P03971	560 aa		12.36	□□□□□ -0.43
DCTN1-223	ENST00000495643	GCFC2	P16383	781 aa	Known RBP	12.36	□□□□□ -0.43
DCTN1-223	ENST00000495643	KRT2	P35908	639 aa		12.36	□□□□□ -0.43
DCTN1-223	ENST00000495643	JAK3	P52333	1124 aa		12.36	□□□□□ -0.43
DCTN1-223	ENST00000495643	TMEM62	Q0P6H9	643 aa		12.36	□□□□□ -0.43
DCTN1-223	ENST00000495643	ADGRE1	Q14246	886 aa		12.36	□□□□□ -0.43
DCTN1-223	ENST00000495643	KRT40	Q6A162	431 aa		12.36	□□□□□ -0.43
DCTN1-223	ENST00000495643	TSHZ1	Q6ZSZ6	1077 aa		12.36	□□□□□ -0.43
DCTN1-223	ENST00000495643	CKAP2L	Q8IYA6	745 aa		12.36	□□□□□ -0.43
DCTN1-223	ENST00000495643	LLPH	Q9BRT6	129 aa	Known RBP	12.36	□□□□□ -0.43
DCTN1-223	ENST00000495643	ZBED2	Q9BTP6	218 aa		12.36	□□□□□ -0.43
DCTN1-223	ENST00000495643	CELF4	Q9BZC1	486 aa	Known RBP	12.36	□□□□□ -0.43
DCTN1-223	ENST00000495643	AGO3	Q9H9G7	860 aa	Known RBP	12.36	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms