RNA–Protein interactions for RNA: ENST00000495394.1

RPSA-209, Transcript of ribosomal protein SA, humanhuman

TSL 1 (best)

Gene RPSA, Length 2,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-209ENST00000495394 LRRC37A3O60309 1634 aa10.19□□□□□ -0.78
RPSA-209ENST00000495394 BRWD3Q6RI45 1802 aa10.19□□□□□ -0.78
RPSA-209ENST00000495394 STX6O43752 255 aa10.19□□□□□ -0.78
RPSA-209ENST00000495394 TGDSO95455 350 aa10.19□□□□□ -0.78
RPSA-209ENST00000495394 BAG2O95816 211 aa10.19□□□□□ -0.78
RPSA-209ENST00000495394 F2P00734 622 aa10.19□□□□□ -0.78
RPSA-209ENST00000495394 ETFBP38117 255 aa10.19□□□□□ -0.78
RPSA-209ENST00000495394 CETN2P41208 172 aa10.19□□□□□ -0.78
RPSA-209ENST00000495394 MSLNQ13421 630 aaPredicted RBP10.19□□□□□ -0.78
RPSA-209ENST00000495394 GNA13Q14344 377 aa10.19□□□□□ -0.78
RPSA-209ENST00000495394 CFAP157Q5JU67 520 aa10.19□□□□□ -0.78
RPSA-209ENST00000495394 EEPD1Q7L9B9 569 aa10.19□□□□□ -0.78
RPSA-209ENST00000495394 COLGALT2Q8IYK4 626 aa10.19□□□□□ -0.78
RPSA-209ENST00000495394 CRACR2BQ8N4Y2 399 aaPredicted RBP10.19□□□□□ -0.78
RPSA-209ENST00000495394 CATSPER2Q96P56 530 aa10.19□□□□□ -0.78
RPSA-209ENST00000495394 MTMR12Q9C0I1 747 aa10.19□□□□□ -0.78
RPSA-209ENST00000495394 CLSTN2Q9H4D0 955 aa10.19□□□□□ -0.78
RPSA-209ENST00000495394 XAB2Q9HCS7 855 aaKnown RBP10.19□□□□□ -0.78
RPSA-209ENST00000495394 ZNF624Q9P2J8 865 aaPredicted RBP10.19□□□□□ -0.78
RPSA-209ENST00000495394 HOOK1Q9UJC3 728 aaKnown RBP10.19□□□□□ -0.78
RPSA-209ENST00000495394 CD2APQ9Y5K6 639 aa10.19□□□□□ -0.78
RPSA-209ENST00000495394 RPAP1Q9BWH6 1393 aaPredicted RBP10.18□□□□□ -0.78
RPSA-209ENST00000495394 KLRG2A4D1S0 409 aaPredicted RBP10.18□□□□□ -0.78
RPSA-209ENST00000495394 PSDA5PKW4 1024 aaPredicted RBP10.18□□□□□ -0.78
RPSA-209ENST00000495394 EXTL3O43909 919 aa10.18□□□□□ -0.78
RPSA-209ENST00000495394 PLOD3O60568 738 aa10.18□□□□□ -0.78
RPSA-209ENST00000495394 PENKP01210 267 aaPredicted RBP10.18□□□□□ -0.78
RPSA-209ENST00000495394 CAPNS1P04632 268 aa10.18□□□□□ -0.78
RPSA-209ENST00000495394 CDK4P11802 303 aa10.18□□□□□ -0.78
RPSA-209ENST00000495394 HOXC12P31275 282 aa10.18□□□□□ -0.78
RPSA-209ENST00000495394 EVI2BP34910 448 aa10.18□□□□□ -0.78
RPSA-209ENST00000495394 IL13P35225 146 aa10.18□□□□□ -0.78
RPSA-209ENST00000495394 TMPOP42166 694 aaKnown RBP10.18□□□□□ -0.78
RPSA-209ENST00000495394 MAN2A2P49641 1150 aa10.18□□□□□ -0.78
RPSA-209ENST00000495394 GUCY2FP51841 1108 aa10.18□□□□□ -0.78
RPSA-209ENST00000495394 NUBP1P53384 320 aa10.18□□□□□ -0.78
RPSA-209ENST00000495394 MAP2K5Q13163 448 aa10.18□□□□□ -0.78
RPSA-209ENST00000495394 CEP78Q5JTW2 689 aa10.18□□□□□ -0.78
RPSA-209ENST00000495394 NEPROQ6NW34 567 aa10.18□□□□□ -0.78
RPSA-209ENST00000495394 FCHSD1Q86WN1 690 aa10.18□□□□□ -0.78
RPSA-209ENST00000495394 TRIM22Q8IYM9 498 aa10.18□□□□□ -0.78
RPSA-209ENST00000495394 LSMEM1Q8N8F7 131 aa10.18□□□□□ -0.78
RPSA-209ENST00000495394 ANTXR1Q9H6X2 564 aa10.18□□□□□ -0.78
RPSA-209ENST00000495394 ANKEF1Q9NU02 776 aa10.18□□□□□ -0.78
RPSA-209ENST00000495394 BLOC1S4Q9NUP1 217 aa10.18□□□□□ -0.78
RPSA-209ENST00000495394 LIMCH1Q9UPQ0 1083 aa10.18□□□□□ -0.78
RPSA-209ENST00000495394 EFR3BQ9Y2G0 817 aa10.18□□□□□ -0.78
RPSA-209ENST00000495394 MTF2Q9Y483 593 aaPredicted RBP10.18□□□□□ -0.78
RPSA-209ENST00000495394 SNX8Q9Y5X2 465 aa10.18□□□□□ -0.78
RPSA-209ENST00000495394 DISP2A7MBM2 1401 aa10.18□□□□□ -0.78
RPSA-209ENST00000495394 IGSF1Q8N6C5 1336 aa10.18□□□□□ -0.78
RPSA-209ENST00000495394 CLRN2A0PK11 232 aa10.18□□□□□ -0.78
RPSA-209ENST00000495394 FAM177BA6PVY3 158 aa10.18□□□□□ -0.78
RPSA-209ENST00000495394 STRNO43815 780 aa10.18□□□□□ -0.78
RPSA-209ENST00000495394 ACSL4O60488 711 aa10.18□□□□□ -0.78
RPSA-209ENST00000495394 CDC45O75419 566 aa10.18□□□□□ -0.78
RPSA-209ENST00000495394 TIPRLO75663 272 aa10.18□□□□□ -0.78
RPSA-209ENST00000495394 ZKSCAN1P17029 563 aaPredicted RBP10.18□□□□□ -0.78
RPSA-209ENST00000495394 POU3F3P20264 500 aaPredicted RBP10.18□□□□□ -0.78
RPSA-209ENST00000495394 ATP5OP48047 213 aa10.18□□□□□ -0.78
RPSA-209ENST00000495394 ETV1P50549 477 aa10.18□□□□□ -0.78
RPSA-209ENST00000495394 MCL1Q07820 350 aa10.18□□□□□ -0.78
RPSA-209ENST00000495394 FBXW10Q5XX13 1052 aa10.18□□□□□ -0.78
RPSA-209ENST00000495394 CAND1Q86VP6 1230 aaKnown RBP10.18□□□□□ -0.78
RPSA-209ENST00000495394 SYTL1Q8IYJ3 562 aa10.18□□□□□ -0.78
RPSA-209ENST00000495394 LRRC47Q8N1G4 583 aaKnown RBP10.18□□□□□ -0.78
RPSA-209ENST00000495394 OTUD7AQ8TE49 926 aaPredicted RBP10.18□□□□□ -0.78
RPSA-209ENST00000495394 LMBR1Q8WVP7 490 aa10.18□□□□□ -0.78
RPSA-209ENST00000495394 CNKSR1Q969H4 720 aa10.18□□□□□ -0.78
RPSA-209ENST00000495394 SNF8Q96H20 258 aa10.18□□□□□ -0.78
RPSA-209ENST00000495394 DESI2Q9BSY9 194 aa10.18□□□□□ -0.78
RPSA-209ENST00000495394 EDEM3Q9BZQ6 932 aa10.18□□□□□ -0.78
RPSA-209ENST00000495394 PKD1L3Q7Z443 1732 aa10.17□□□□□ -0.78
RPSA-209ENST00000495394 CCDC171Q6TFL3 1326 aa10.17□□□□□ -0.78
RPSA-209ENST00000495394 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.17□□□□□ -0.78
RPSA-209ENST00000495394 PPEF1O14829 653 aaPredicted RBP10.17□□□□□ -0.78
RPSA-209ENST00000495394 RNF113AO15541 343 aaKnown RBP10.17□□□□□ -0.78
RPSA-209ENST00000495394 NPPAP01160 153 aa10.17□□□□□ -0.78
RPSA-209ENST00000495394 CDC25CP30307 473 aa10.17□□□□□ -0.78
RPSA-209ENST00000495394 DYNC1I2Q13409 638 aaKnown RBP10.17□□□□□ -0.78
RPSA-209ENST00000495394 MKRN4PQ13434 485 aaPredicted RBP10.17□□□□□ -0.78
RPSA-209ENST00000495394 FAM98CQ17RN3 349 aaKnown RBP10.17□□□□□ -0.78
RPSA-209ENST00000495394 IKBIPQ70UQ0 350 aa10.17□□□□□ -0.78
RPSA-209ENST00000495394 LUZP1Q86V48 1076 aa10.17□□□□□ -0.78
RPSA-209ENST00000495394 SPATA24Q86W54 205 aa10.17□□□□□ -0.78
RPSA-209ENST00000495394 ITPRIPQ8IWB1 547 aa10.17□□□□□ -0.78
RPSA-209ENST00000495394 ARRDC4Q8NCT1 418 aa10.17□□□□□ -0.78
RPSA-209ENST00000495394 OR6C4Q8NGE1 309 aa10.17□□□□□ -0.78
RPSA-209ENST00000495394 EYA1Q99502 592 aa10.17□□□□□ -0.78
RPSA-209ENST00000495394 NCOR1P1Q9H4R4 102 aa10.17□□□□□ -0.78
RPSA-209ENST00000495394 ANO2Q9NQ90 1003 aa10.17□□□□□ -0.78
RPSA-209ENST00000495394 ABCF3Q9NUQ8 709 aa10.17□□□□□ -0.78
RPSA-209ENST00000495394 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.17□□□□□ -0.78
RPSA-209ENST00000495394 SHANK3Q9BYB0 1731 aa10.17□□□□□ -0.78
RPSA-209ENST00000495394 ANO9A1A5B4 782 aa10.16□□□□□ -0.78
RPSA-209ENST00000495394 KRT14P02533 472 aa10.16□□□□□ -0.78
RPSA-209ENST00000495394 VARSP26640 1264 aaKnown RBP10.16□□□□□ -0.78
RPSA-209ENST00000495394 ACADSBP45954 432 aa10.16□□□□□ -0.78
RPSA-209ENST00000495394 EVCP57679 992 aa10.16□□□□□ -0.78
RPSA-209ENST00000495394 ACY1Q03154 408 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms