RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 RSPH3Q86UC2 560 aa13.56□□□□□ -0.24
CSNK1E-213ENST00000495232 NEK9Q8TD19 979 aa13.56□□□□□ -0.24
CSNK1E-213ENST00000495232 FOXD4L4Q8WXT5 416 aaPredicted RBP13.56□□□□□ -0.24
CSNK1E-213ENST00000495232 EIF2AK1Q9BQI3 630 aaKnown RBP13.56□□□□□ -0.24
CSNK1E-213ENST00000495232 NOC4LQ9BVI4 516 aaKnown RBP13.56□□□□□ -0.24
CSNK1E-213ENST00000495232 SEPT9Q9UHD8 586 aaPredicted RBP13.56□□□□□ -0.24
CSNK1E-213ENST00000495232 STK24Q9Y6E0 443 aa13.56□□□□□ -0.24
CSNK1E-213ENST00000495232 COL1A2P08123 1366 aa13.56□□□□□ -0.24
CSNK1E-213ENST00000495232 WDR81Q562E7 1941 aa13.55□□□□□ -0.24
CSNK1E-213ENST00000495232 TRIP12Q14669 1992 aaPredicted RBP13.55□□□□□ -0.24
CSNK1E-213ENST00000495232 POTEMA6NI47 508 aa13.55□□□□□ -0.24
CSNK1E-213ENST00000495232 DDX11L8A8MPP1 907 aa13.55□□□□□ -0.24
CSNK1E-213ENST00000495232 RPLP2P05387 115 aaKnown RBP13.55□□□□□ -0.24
CSNK1E-213ENST00000495232 ZSCAN22P10073 491 aaPredicted RBP13.55□□□□□ -0.24
CSNK1E-213ENST00000495232 ATP4AP20648 1035 aa13.55□□□□□ -0.24
CSNK1E-213ENST00000495232 HOXC8P31273 242 aa13.55□□□□□ -0.24
CSNK1E-213ENST00000495232 THPOP40225 353 aa13.55□□□□□ -0.24
CSNK1E-213ENST00000495232 PRPHP41219 470 aa13.55□□□□□ -0.24
CSNK1E-213ENST00000495232 MAGEA10P43363 369 aaPredicted RBP13.55□□□□□ -0.24
CSNK1E-213ENST00000495232 FXR2P51116 673 aaKnown RBP eCLIP13.55□□□□□ -0.24
CSNK1E-213ENST00000495232 CCL23P55773 120 aa13.55□□□□□ -0.24
CSNK1E-213ENST00000495232 CYP4A11Q02928 519 aa13.55□□□□□ -0.24
CSNK1E-213ENST00000495232 FPGSQ05932 587 aa13.55□□□□□ -0.24
CSNK1E-213ENST00000495232 SPIRE1Q08AE8 756 aa13.55□□□□□ -0.24
CSNK1E-213ENST00000495232 PDIA5Q14554 519 aa13.55□□□□□ -0.24
CSNK1E-213ENST00000495232 UGCGQ16739 394 aa13.55□□□□□ -0.24
CSNK1E-213ENST00000495232 XKR3Q5GH77 459 aa13.55□□□□□ -0.24
CSNK1E-213ENST00000495232 HAUS3Q68CZ6 603 aa13.55□□□□□ -0.24
CSNK1E-213ENST00000495232 TAF2Q6P1X5 1199 aa13.55□□□□□ -0.24
CSNK1E-213ENST00000495232 OTUD6AQ7L8S5 288 aa13.55□□□□□ -0.24
CSNK1E-213ENST00000495232 SERINC5Q86VE9 423 aa13.55□□□□□ -0.24
CSNK1E-213ENST00000495232 TPH2Q8IWU9 490 aa13.55□□□□□ -0.24
CSNK1E-213ENST00000495232 C4orf32Q8N8J7 132 aa13.55□□□□□ -0.24
CSNK1E-213ENST00000495232 DYDC2Q96IM9 177 aa13.55□□□□□ -0.24
CSNK1E-213ENST00000495232 LXNQ9BS40 222 aa13.55□□□□□ -0.24
CSNK1E-213ENST00000495232 ZSWIM4Q9H7M6 989 aa13.55□□□□□ -0.24
CSNK1E-213ENST00000495232 LRWD1Q9UFC0 647 aa13.55□□□□□ -0.24
CSNK1E-213ENST00000495232 ZNF862O60290 1169 aa13.54□□□□□ -0.24
CSNK1E-213ENST00000495232 CKBP12277 381 aa13.54□□□□□ -0.24
CSNK1E-213ENST00000495232 KLRC1P26715 233 aa13.54□□□□□ -0.24
CSNK1E-213ENST00000495232 ADAM17P78536 824 aa13.54□□□□□ -0.24
CSNK1E-213ENST00000495232 ATP2C1P98194 919 aaPredicted RBP13.54□□□□□ -0.24
CSNK1E-213ENST00000495232 PPIGQ13427 754 aaKnown RBP eCLIP13.54□□□□□ -0.241e-6■■□□□ 12.1
CSNK1E-213ENST00000495232 CTTNQ14247 550 aaKnown RBP13.54□□□□□ -0.24
CSNK1E-213ENST00000495232 HIC1Q14526 733 aa13.54□□□□□ -0.24
CSNK1E-213ENST00000495232 SF3A1Q15459 793 aaKnown RBP13.54□□□□□ -0.24
CSNK1E-213ENST00000495232 ARL6IP4Q66PJ3 421 aaKnown RBP13.54□□□□□ -0.24
CSNK1E-213ENST00000495232 MTHFD1LQ6UB35 978 aa13.54□□□□□ -0.24
CSNK1E-213ENST00000495232 TRAPPC12Q8WVT3 735 aa13.54□□□□□ -0.24
CSNK1E-213ENST00000495232 CCDC43Q96MW1 224 aaKnown RBP13.54□□□□□ -0.24
CSNK1E-213ENST00000495232 ZNF396Q96N95 335 aaPredicted RBP13.54□□□□□ -0.24
CSNK1E-213ENST00000495232 UBE2OQ9C0C9 1292 aaKnown RBP13.54□□□□□ -0.24
CSNK1E-213ENST00000495232 RGL1Q9NZL6 768 aa13.54□□□□□ -0.24
CSNK1E-213ENST00000495232 CEP290O15078 2479 aa13.53□□□□□ -0.24
CSNK1E-213ENST00000495232 MBLAC1A4D2B0 266 aaPredicted RBP13.53□□□□□ -0.24
CSNK1E-213ENST00000495232 M0QZ92 97 aa13.53□□□□□ -0.24
CSNK1E-213ENST00000495232 MAGEB2O15479 319 aa13.53□□□□□ -0.24
CSNK1E-213ENST00000495232 CAND2O75155 1236 aa13.53□□□□□ -0.24
CSNK1E-213ENST00000495232 SLITRK3O94933 977 aa13.53□□□□□ -0.24
CSNK1E-213ENST00000495232 PARNO95453 639 aaKnown RBP13.53□□□□□ -0.24
CSNK1E-213ENST00000495232 SELPP16109 830 aa13.53□□□□□ -0.24
CSNK1E-213ENST00000495232 ITGB8P26012 769 aa13.53□□□□□ -0.24
CSNK1E-213ENST00000495232 TMOD1P28289 359 aa13.53□□□□□ -0.24
CSNK1E-213ENST00000495232 YWHABP31946 246 aaKnown RBP13.53□□□□□ -0.24
CSNK1E-213ENST00000495232 CEBPZQ03701 1054 aaKnown RBP13.53□□□□□ -0.24
CSNK1E-213ENST00000495232 TBC1D8BQ0IIM8 1120 aa13.53□□□□□ -0.24
CSNK1E-213ENST00000495232 MTERF2Q49AM1 385 aa13.53□□□□□ -0.24
CSNK1E-213ENST00000495232 MARCH8Q5T0T0 291 aa13.53□□□□□ -0.24
CSNK1E-213ENST00000495232 FAM173BQ6P4H8 233 aa13.53□□□□□ -0.24
CSNK1E-213ENST00000495232 CHRDL2Q6WN34 429 aa13.53□□□□□ -0.24
CSNK1E-213ENST00000495232 LRRC8DQ7L1W4 858 aa13.53□□□□□ -0.24
CSNK1E-213ENST00000495232 C4orf19Q8IY42 314 aa13.53□□□□□ -0.24
CSNK1E-213ENST00000495232 RPUSD2Q8IZ73 545 aaKnown RBP13.53□□□□□ -0.24
CSNK1E-213ENST00000495232 METTL13Q8N6R0 699 aa13.53□□□□□ -0.24
CSNK1E-213ENST00000495232 DNAJB3Q8WWF6 145 aa13.53□□□□□ -0.24
CSNK1E-213ENST00000495232 DHX38Q92620 1227 aaKnown RBP13.53□□□□□ -0.24
CSNK1E-213ENST00000495232 CTAGE1Q96RT6 745 aa13.53□□□□□ -0.24
CSNK1E-213ENST00000495232 FAM49AQ9H0Q0 323 aaPredicted RBP13.53□□□□□ -0.24
CSNK1E-213ENST00000495232 TUFT1Q9NNX1 390 aa13.53□□□□□ -0.24
CSNK1E-213ENST00000495232 PCDHA2Q9Y5H9 948 aa13.53□□□□□ -0.24
CSNK1E-213ENST00000495232 UMODL1Q5DID0 1318 aa13.53□□□□□ -0.24
CSNK1E-213ENST00000495232 LTBP2Q14767 1821 aa13.53□□□□□ -0.24
CSNK1E-213ENST00000495232 SMIM35A0A1B0GVV1 85 aa13.52□□□□□ -0.25
CSNK1E-213ENST00000495232 VWA3AA6NCI4 1184 aa13.52□□□□□ -0.25
CSNK1E-213ENST00000495232 RSPH10B2B2RC85 870 aa13.52□□□□□ -0.25
CSNK1E-213ENST00000495232 F13A1P00488 732 aa13.52□□□□□ -0.25
CSNK1E-213ENST00000495232 IQCF3P0C7M6 154 aa13.52□□□□□ -0.25
CSNK1E-213ENST00000495232 RSPH10BP0C881 870 aa13.52□□□□□ -0.25
CSNK1E-213ENST00000495232 CSF2RAP15509 400 aa13.52□□□□□ -0.25
CSNK1E-213ENST00000495232 RFC2P35250 354 aa13.52□□□□□ -0.25
CSNK1E-213ENST00000495232 CCT6AP40227 531 aaKnown RBP13.52□□□□□ -0.25
CSNK1E-213ENST00000495232 RBL2Q08999 1139 aa13.52□□□□□ -0.25
CSNK1E-213ENST00000495232 IER5Q5VY09 327 aa13.52□□□□□ -0.25
CSNK1E-213ENST00000495232 KRT79Q5XKE5 535 aa13.52□□□□□ -0.25
CSNK1E-213ENST00000495232 RUFY4Q6ZNE9 571 aa13.52□□□□□ -0.25
CSNK1E-213ENST00000495232 EXOC8Q8IYI6 725 aa13.52□□□□□ -0.25
CSNK1E-213ENST00000495232 NME8Q8N427 588 aa13.52□□□□□ -0.25
CSNK1E-213ENST00000495232 SCLYQ96I15 445 aa13.52□□□□□ -0.25
CSNK1E-213ENST00000495232 CEP170P1Q96L14 293 aa13.52□□□□□ -0.25
CSNK1E-213ENST00000495232 GDF15Q99988 308 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms