RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 GJB5O95377 273 aa37.58■■■■□ 3.61
CBX4-203ENST00000494546 AMHP03971 560 aa37.58■■■■□ 3.61
CBX4-203ENST00000494546 MGAT3Q09327 533 aa37.58■■■■□ 3.61
CBX4-203ENST00000494546 MYOCDQ8IZQ8 938 aa37.58■■■■□ 3.61
CBX4-203ENST00000494546 WASF1Q92558 559 aa37.58■■■■□ 3.61
CBX4-203ENST00000494546 IFIH1Q9BYX4 1025 aaKnown RBP37.58■■■■□ 3.61
CBX4-203ENST00000494546 PCDHA2Q9Y5H9 948 aa37.58■■■■□ 3.61
CBX4-203ENST00000494546 CDY2AQ9Y6F7 541 aa37.58■■■■□ 3.61
CBX4-203ENST00000494546 GAS7O60861 476 aa37.57■■■■□ 3.6
CBX4-203ENST00000494546 ARHGEF15O94989 841 aa37.57■■■■□ 3.6
CBX4-203ENST00000494546 IGFBP4P22692 258 aa37.57■■■■□ 3.6
CBX4-203ENST00000494546 MRPS6P82932 125 aaKnown RBP37.57■■■■□ 3.6
CBX4-203ENST00000494546 TAP1Q03518 808 aa37.57■■■■□ 3.6
CBX4-203ENST00000494546 MKRN4PQ13434 485 aaPredicted RBP37.57■■■■□ 3.6
CBX4-203ENST00000494546 INF2Q27J81 1249 aa37.57■■■■□ 3.6
CBX4-203ENST00000494546 C8orf34Q49A92 452 aa37.57■■■■□ 3.6
CBX4-203ENST00000494546 Q4G0T1 1027 aa37.57■■■■□ 3.6
CBX4-203ENST00000494546 MTHFD1LQ6UB35 978 aa37.57■■■■□ 3.6
CBX4-203ENST00000494546 TRMT1LQ7Z2T5 733 aaKnown RBP37.57■■■■□ 3.6
CBX4-203ENST00000494546 APBB2Q92870 758 aa37.57■■■■□ 3.6
CBX4-203ENST00000494546 SLC5A5Q92911 643 aa37.57■■■■□ 3.6
CBX4-203ENST00000494546 GJA10Q969M2 543 aa37.57■■■■□ 3.6
CBX4-203ENST00000494546 RIT2Q99578 217 aa37.57■■■■□ 3.6
CBX4-203ENST00000494546 CCDC194A0A1B0GVG4 234 aa37.56■■■■□ 3.6
CBX4-203ENST00000494546 RPLP2P05387 115 aaKnown RBP37.56■■■■□ 3.6
CBX4-203ENST00000494546 ATP4AP20648 1035 aa37.56■■■■□ 3.6
CBX4-203ENST00000494546 ADGRE1Q14246 886 aa37.56■■■■□ 3.6
CBX4-203ENST00000494546 LRCH2Q5VUJ6 765 aa37.56■■■■□ 3.6
CBX4-203ENST00000494546 TEKT3Q9BXF9 490 aa37.56■■■■□ 3.6
CBX4-203ENST00000494546 GABBR1Q9UBS5 961 aa37.56■■■■□ 3.6
CBX4-203ENST00000494546 MAFBQ9Y5Q3 323 aaPredicted RBP37.56■■■■□ 3.6
CBX4-203ENST00000494546 CHD9Q3L8U1 2897 aa37.55■■■■□ 3.6
CBX4-203ENST00000494546 CYP3A7-CYP3A51PA0A087WV96 503 aa37.55■■■■□ 3.6
CBX4-203ENST00000494546 LCHNA4D1U4 455 aa37.55■■■■□ 3.6
CBX4-203ENST00000494546 WDR64B1ANS9 1081 aa37.55■■■■□ 3.6
CBX4-203ENST00000494546 CHMP2AO43633 222 aa37.55■■■■□ 3.6
CBX4-203ENST00000494546 FDPSP14324 419 aaKnown RBP37.55■■■■□ 3.6
CBX4-203ENST00000494546 CYP3A7P24462 503 aa37.55■■■■□ 3.6
CBX4-203ENST00000494546 TMEM62Q0P6H9 643 aa37.55■■■■□ 3.6
CBX4-203ENST00000494546 RAD9AQ99638 391 aa37.55■■■■□ 3.6
CBX4-203ENST00000494546 KLRC1P26715 233 aa37.54■■■■□ 3.6
CBX4-203ENST00000494546 LPIN1Q14693 890 aa37.54■■■■□ 3.6
CBX4-203ENST00000494546 IER5Q5VY09 327 aa37.54■■■■□ 3.6
CBX4-203ENST00000494546 OXER1Q8TDS5 423 aa37.54■■■■□ 3.6
CBX4-203ENST00000494546 DISC1Q9NRI5 854 aa37.54■■■■□ 3.6
CBX4-203ENST00000494546 M0QZ92 97 aa37.53■■■■□ 3.6
CBX4-203ENST00000494546 LETM2Q2VYF4 491 aa37.53■■■■□ 3.6
CBX4-203ENST00000494546 ZNF484Q5JVG2 852 aa37.53■■■■□ 3.6
CBX4-203ENST00000494546 FBXO47Q5MNV8 452 aa37.53■■■■□ 3.6
CBX4-203ENST00000494546 MOXD1Q6UVY6 613 aa37.53■■■■□ 3.6
CBX4-203ENST00000494546 NSUN7Q8NE18 718 aaKnown RBP37.53■■■■□ 3.6
CBX4-203ENST00000494546 BBXQ8WY36 941 aaPredicted RBP37.53■■■■□ 3.6
CBX4-203ENST00000494546 ARNTL2Q8WYA1 636 aa37.53■■■■□ 3.6
CBX4-203ENST00000494546 COL1A2P08123 1366 aa37.53■■■■□ 3.6
CBX4-203ENST00000494546 SMIM35A0A1B0GVV1 85 aa37.52■■■■□ 3.6
CBX4-203ENST00000494546 PPM1EQ8WY54 764 aa37.52■■■■□ 3.6
CBX4-203ENST00000494546 UNC45AQ9H3U1 944 aa37.52■■■■□ 3.6
CBX4-203ENST00000494546 DDX25Q9UHL0 483 aaKnown RBP37.52■■■■□ 3.6
CBX4-203ENST00000494546 MICAL3Q7RTP6 2002 aa37.52■■■■□ 3.6
CBX4-203ENST00000494546 MYO9BQ13459 2157 aa37.51■■■■□ 3.6
CBX4-203ENST00000494546 RFXAPO00287 272 aa37.51■■■■□ 3.6
CBX4-203ENST00000494546 PIK3AP1Q6ZUJ8 805 aa37.51■■■■□ 3.6
CBX4-203ENST00000494546 PHF6Q8IWS0 365 aaKnown RBP eCLIP37.51■■■■□ 3.6
CBX4-203ENST00000494546 MBOAT7Q96N66 472 aa37.51■■■■□ 3.6
CBX4-203ENST00000494546 TRPV2Q9Y5S1 764 aa37.51■■■■□ 3.6
CBX4-203ENST00000494546 LOC101059915A0A1B0GWI6 518 aaPredicted RBP37.5■■■■□ 3.59
CBX4-203ENST00000494546 JAK2O60674 1132 aa37.5■■■■□ 3.59
CBX4-203ENST00000494546 PSMD10O75832 226 aa37.5■■■■□ 3.59
CBX4-203ENST00000494546 SFNP31947 248 aa37.5■■■■□ 3.59
CBX4-203ENST00000494546 IGSF9BQ9UPX0 1349 aa37.5■■■■□ 3.59
CBX4-203ENST00000494546 ZBTB42B2RXF5 422 aa37.49■■■■□ 3.59
CBX4-203ENST00000494546 UPP2O95045 317 aa37.49■■■■□ 3.59
CBX4-203ENST00000494546 JAK3P52333 1124 aa37.49■■■■□ 3.59
CBX4-203ENST00000494546 TSHZ1Q6ZSZ6 1077 aa37.49■■■■□ 3.59
CBX4-203ENST00000494546 SPRED2Q7Z698 418 aa37.49■■■■□ 3.59
CBX4-203ENST00000494546 NEK8Q86SG6 692 aa37.49■■■■□ 3.59
CBX4-203ENST00000494546 NME8Q8N427 588 aa37.49■■■■□ 3.59
CBX4-203ENST00000494546 USP38Q8NB14 1042 aa37.49■■■■□ 3.59
CBX4-203ENST00000494546 SIP14410 1827 aa37.49■■■■□ 3.59
CBX4-203ENST00000494546 EPOPA6NHQ4 379 aa37.48■■■■□ 3.59
CBX4-203ENST00000494546 FOSBP53539 338 aa37.48■■■■□ 3.59
CBX4-203ENST00000494546 MIER3Q7Z3K6 550 aa37.48■■■■□ 3.59
CBX4-203ENST00000494546 ETNPPLQ8TBG4 499 aa37.48■■■■□ 3.59
CBX4-203ENST00000494546 FAM167AQ96KS9 214 aa37.48■■■■□ 3.59
CBX4-203ENST00000494546 CELF4Q9BZC1 486 aaKnown RBP37.48■■■■□ 3.59
CBX4-203ENST00000494546 BRMS1Q9HCU9 246 aa37.48■■■■□ 3.59
CBX4-203ENST00000494546 INSL6Q9Y581 213 aa37.48■■■■□ 3.59
CBX4-203ENST00000494546 SLC37A4O43826 429 aa37.47■■■■□ 3.59
CBX4-203ENST00000494546 KRT2P35908 639 aa37.47■■■■□ 3.59
CBX4-203ENST00000494546 TOP1MTQ969P6 601 aa37.47■■■■□ 3.59
CBX4-203ENST00000494546 AGO3Q9H9G7 860 aaKnown RBP37.47■■■■□ 3.59
CBX4-203ENST00000494546 LIMCH1Q9UPQ0 1083 aa37.47■■■■□ 3.59
CBX4-203ENST00000494546 CD52P31358 61 aa37.46■■■■□ 3.59
CBX4-203ENST00000494546 ST3GAL1Q11201 340 aa37.46■■■■□ 3.59
CBX4-203ENST00000494546 CCDC85BQ15834 202 aaPredicted RBP37.46■■■■□ 3.59
CBX4-203ENST00000494546 KIAA0319LQ8IZA0 1049 aa37.46■■■■□ 3.59
CBX4-203ENST00000494546 CEP131Q9UPN4 1083 aa37.46■■■■□ 3.59
CBX4-203ENST00000494546 EYSQ5T1H1 3165 aa37.45■■■■□ 3.59
CBX4-203ENST00000494546 ZNF862O60290 1169 aa37.45■■■■□ 3.59
CBX4-203ENST00000494546 CCNT1O60563 726 aaKnown RBP37.45■■■■□ 3.59
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms