RNA–Protein interactions for RNA: ENST00000494486.1

TRIM59-206, Transcript of tripartite motif containing 59, humanhuman

TSL 3

Gene TRIM59, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-206ENST00000494486 ARHGEF3Q9NR81 526 aa12.83□□□□□ -0.36
TRIM59-206ENST00000494486 TYW1Q9NV66 732 aaKnown RBP12.83□□□□□ -0.36
TRIM59-206ENST00000494486 RAB23Q9ULC3 237 aa12.83□□□□□ -0.36
TRIM59-206ENST00000494486 MTMR7Q9Y216 660 aa12.83□□□□□ -0.36
TRIM59-206ENST00000494486 NRCAMQ92823 1304 aa12.83□□□□□ -0.36
TRIM59-206ENST00000494486 ZFYVE26Q68DK2 2539 aa12.82□□□□□ -0.36
TRIM59-206ENST00000494486 C2orf71A6NGG8 1288 aa12.82□□□□□ -0.36
TRIM59-206ENST00000494486 SRRM3A6NNA2 597 aaPredicted RBP12.82□□□□□ -0.36
TRIM59-206ENST00000494486 SARSP49591 514 aaKnown RBP12.82□□□□□ -0.36
TRIM59-206ENST00000494486 BMS1Q14692 1282 aaKnown RBP12.82□□□□□ -0.36
TRIM59-206ENST00000494486 LAIR1Q6GTX8 287 aa12.82□□□□□ -0.36
TRIM59-206ENST00000494486 KANK3Q6NY19 840 aa12.82□□□□□ -0.36
TRIM59-206ENST00000494486 DCLRE1AQ6PJP8 1040 aa12.82□□□□□ -0.36
TRIM59-206ENST00000494486 GPR149Q86SP6 731 aa12.82□□□□□ -0.36
TRIM59-206ENST00000494486 LMBR1Q8WVP7 490 aa12.82□□□□□ -0.36
TRIM59-206ENST00000494486 SHDQ96IW2 340 aa12.82□□□□□ -0.36
TRIM59-206ENST00000494486 KIAA1671Q9BY89 1806 aa12.81□□□□□ -0.36
TRIM59-206ENST00000494486 SORBS3O60504 671 aa12.81□□□□□ -0.36
TRIM59-206ENST00000494486 CHGBP05060 677 aa12.81□□□□□ -0.36
TRIM59-206ENST00000494486 RPLP2P05387 115 aaKnown RBP12.81□□□□□ -0.36
TRIM59-206ENST00000494486 RETP07949 1114 aa12.81□□□□□ -0.36
TRIM59-206ENST00000494486 SLC3A2P08195 630 aaKnown RBP12.81□□□□□ -0.36
TRIM59-206ENST00000494486 PPM1AP35813 382 aa12.81□□□□□ -0.36
TRIM59-206ENST00000494486 TDO2P48775 406 aa12.81□□□□□ -0.36
TRIM59-206ENST00000494486 STARD6P59095 220 aa12.81□□□□□ -0.36
TRIM59-206ENST00000494486 SLFN5Q08AF3 891 aa12.81□□□□□ -0.36
TRIM59-206ENST00000494486 PRR23CQ6ZRP0 262 aa12.81□□□□□ -0.36
TRIM59-206ENST00000494486 MCF2L2Q86YR7 1114 aa12.81□□□□□ -0.36
TRIM59-206ENST00000494486 GPR152Q8TDT2 470 aa12.81□□□□□ -0.36
TRIM59-206ENST00000494486 TBC1D5Q92609 795 aa12.81□□□□□ -0.36
TRIM59-206ENST00000494486 FAM126AQ9BYI3 521 aaPredicted RBP12.81□□□□□ -0.36
TRIM59-206ENST00000494486 CWH43Q9H720 699 aa12.81□□□□□ -0.36
TRIM59-206ENST00000494486 COL20A1Q9P218 1284 aa12.81□□□□□ -0.36
TRIM59-206ENST00000494486 ZNF215Q9UL58 517 aaPredicted RBP12.81□□□□□ -0.36
TRIM59-206ENST00000494486 CDY2AQ9Y6F7 541 aa12.81□□□□□ -0.36
TRIM59-206ENST00000494486 FLNBO75369 2602 aaKnown RBP12.8□□□□□ -0.36
TRIM59-206ENST00000494486 EIF2AK2P19525 551 aaKnown RBP12.8□□□□□ -0.36
TRIM59-206ENST00000494486 MAGEA9P43362 315 aa12.8□□□□□ -0.36
TRIM59-206ENST00000494486 CSRP2Q16527 193 aa12.8□□□□□ -0.36
TRIM59-206ENST00000494486 TMC5Q6UXY8 1006 aa12.8□□□□□ -0.36
TRIM59-206ENST00000494486 RSAD2Q8WXG1 361 aa12.8□□□□□ -0.36
TRIM59-206ENST00000494486 GLG1Q92896 1179 aa12.8□□□□□ -0.36
TRIM59-206ENST00000494486 FOXQ1Q9C009 403 aa12.8□□□□□ -0.36
TRIM59-206ENST00000494486 GPCPD1Q9NPB8 672 aa12.8□□□□□ -0.36
TRIM59-206ENST00000494486 IL17RBQ9NRM6 502 aa12.8□□□□□ -0.36
TRIM59-206ENST00000494486 SEMA4GQ9NTN9 838 aa12.8□□□□□ -0.36
TRIM59-206ENST00000494486 PADI3Q9ULW8 664 aa12.8□□□□□ -0.36
TRIM59-206ENST00000494486 SUPT16HQ9Y5B9 1047 aaKnown RBP12.8□□□□□ -0.36
TRIM59-206ENST00000494486 CCDC171Q6TFL3 1326 aa12.8□□□□□ -0.36
TRIM59-206ENST00000494486 NOP56O00567 594 aaKnown RBP12.79□□□□□ -0.36
TRIM59-206ENST00000494486 UBA1P22314 1058 aaKnown RBP12.79□□□□□ -0.36
TRIM59-206ENST00000494486 NOVP48745 357 aa12.79□□□□□ -0.36
TRIM59-206ENST00000494486 MRPS6P82932 125 aaKnown RBP12.79□□□□□ -0.36
TRIM59-206ENST00000494486 SP2Q02086 613 aa12.79□□□□□ -0.36
TRIM59-206ENST00000494486 PTPN14Q15678 1187 aa12.79□□□□□ -0.36
TRIM59-206ENST00000494486 LETM2Q2VYF4 491 aa12.79□□□□□ -0.36
TRIM59-206ENST00000494486 USH1GQ495M9 461 aa12.79□□□□□ -0.36
TRIM59-206ENST00000494486 IER5Q5VY09 327 aa12.79□□□□□ -0.36
TRIM59-206ENST00000494486 CABP7Q86V35 215 aa12.79□□□□□ -0.36
TRIM59-206ENST00000494486 CELF5Q8N6W0 485 aaKnown RBP12.79□□□□□ -0.36
TRIM59-206ENST00000494486 TMEM87AQ8NBN3 555 aa12.79□□□□□ -0.36
TRIM59-206ENST00000494486 DNAJB3Q8WWF6 145 aa12.79□□□□□ -0.36
TRIM59-206ENST00000494486 OSBPL6Q9BZF3 934 aa12.79□□□□□ -0.36
TRIM59-206ENST00000494486 BOLA2Q9H3K6 86 aa12.79□□□□□ -0.36
TRIM59-206ENST00000494486 SFXN1Q9H9B4 322 aa12.79□□□□□ -0.36
TRIM59-206ENST00000494486 PXMP2Q9NR77 195 aa12.79□□□□□ -0.36
TRIM59-206ENST00000494486 SLC2A4RGQ9NR83 387 aa12.79□□□□□ -0.36
TRIM59-206ENST00000494486 SPG21Q9NZD8 308 aa12.79□□□□□ -0.36
TRIM59-206ENST00000494486 ANKFY1Q9P2R3 1169 aa12.79□□□□□ -0.36
TRIM59-206ENST00000494486 MYH7BA7E2Y1 1941 aa12.78□□□□□ -0.36
TRIM59-206ENST00000494486 TSPY2A6NKD2 308 aa12.78□□□□□ -0.36
TRIM59-206ENST00000494486 IPO8O15397 1037 aaKnown RBP12.78□□□□□ -0.36
TRIM59-206ENST00000494486 GDF9O60383 454 aa12.78□□□□□ -0.36
TRIM59-206ENST00000494486 LRRN2O75325 713 aa12.78□□□□□ -0.36
TRIM59-206ENST00000494486 CXCL14O95715 111 aa12.78□□□□□ -0.36
TRIM59-206ENST00000494486 HSPD1P10809 573 aaKnown RBP12.78□□□□□ -0.36
TRIM59-206ENST00000494486 GNAT2P19087 354 aa12.78□□□□□ -0.36
TRIM59-206ENST00000494486 LIMK1P53667 647 aa12.78□□□□□ -0.36
TRIM59-206ENST00000494486 PAK2Q13177 524 aa12.78□□□□□ -0.36
TRIM59-206ENST00000494486 FAM102BQ5T8I3 360 aa12.78□□□□□ -0.36
TRIM59-206ENST00000494486 KCNT2Q6UVM3 1135 aa12.78□□□□□ -0.36
TRIM59-206ENST00000494486 CLASRPQ8N2M8 674 aaKnown RBP12.78□□□□□ -0.36
TRIM59-206ENST00000494486 KIF12Q96FN5 646 aa12.78□□□□□ -0.36
TRIM59-206ENST00000494486 ZNF558Q96NG5 402 aa12.78□□□□□ -0.36
TRIM59-206ENST00000494486 EPB41L4AQ9HCS5 686 aaPredicted RBP12.78□□□□□ -0.36
TRIM59-206ENST00000494486 IL1RAPL2Q9NP60 686 aa12.78□□□□□ -0.36
TRIM59-206ENST00000494486 EPS15L1Q9UBC2 864 aa12.78□□□□□ -0.36
TRIM59-206ENST00000494486 HCSTQ9UBK5 93 aa12.78□□□□□ -0.36
TRIM59-206ENST00000494486 ABCB11O95342 1321 aa12.78□□□□□ -0.36
TRIM59-206ENST00000494486 FRMPD2Q68DX3 1309 aaPredicted RBP12.78□□□□□ -0.36
TRIM59-206ENST00000494486 KANSL1LA0AUZ9 987 aa12.77□□□□□ -0.37
TRIM59-206ENST00000494486 TM4SF5O14894 197 aa12.77□□□□□ -0.37
TRIM59-206ENST00000494486 APPP05067 770 aa12.77□□□□□ -0.37
TRIM59-206ENST00000494486 IFIT2P09913 472 aaKnown RBP12.77□□□□□ -0.37
TRIM59-206ENST00000494486 EPCAMP16422 314 aa12.77□□□□□ -0.37
TRIM59-206ENST00000494486 IBSPP21815 317 aaPredicted RBP12.77□□□□□ -0.37
TRIM59-206ENST00000494486 PDE4AP27815 886 aa12.77□□□□□ -0.37
TRIM59-206ENST00000494486 GIT2Q14161 759 aa12.77□□□□□ -0.37
TRIM59-206ENST00000494486 SOWAHCQ53LP3 525 aaPredicted RBP12.77□□□□□ -0.37
TRIM59-206ENST00000494486 HSP90AB4PQ58FF6 505 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms