RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 ATP8B4Q8TF62 1192 aa14.93□□□□□ -0.02
ERCC3-209ENST00000494464 SEPT8Q92599 483 aa14.93□□□□□ -0.02
ERCC3-209ENST00000494464 APBB2Q92870 758 aa14.93□□□□□ -0.02
ERCC3-209ENST00000494464 GAS2L1Q99501 681 aaPredicted RBP14.93□□□□□ -0.02
ERCC3-209ENST00000494464 RIT2Q99578 217 aa14.93□□□□□ -0.02
ERCC3-209ENST00000494464 PHF20Q9BVI0 1012 aa14.93□□□□□ -0.02
ERCC3-209ENST00000494464 ZNF302Q9NR11 478 aa14.93□□□□□ -0.02
ERCC3-209ENST00000494464 COL4A4P53420 1690 aaPredicted RBP14.93□□□□□ -0.02
ERCC3-209ENST00000494464 MSH4O15457 936 aa14.92□□□□□ -0.02
ERCC3-209ENST00000494464 TLL1O43897 1013 aa14.92□□□□□ -0.02
ERCC3-209ENST00000494464 HBP1O60381 514 aa14.92□□□□□ -0.02
ERCC3-209ENST00000494464 GJB5O95377 273 aa14.92□□□□□ -0.02
ERCC3-209ENST00000494464 LARGE1O95461 756 aa14.92□□□□□ -0.02
ERCC3-209ENST00000494464 NEK4P51957 841 aa14.92□□□□□ -0.02
ERCC3-209ENST00000494464 IGBP1P78318 339 aa14.92□□□□□ -0.02
ERCC3-209ENST00000494464 NONOQ15233 471 aaKnown RBP eCLIP14.92□□□□□ -0.02
ERCC3-209ENST00000494464 Q4G0T1 1027 aa14.92□□□□□ -0.02
ERCC3-209ENST00000494464 PDXDC2PQ6P474 469 aa14.92□□□□□ -0.02
ERCC3-209ENST00000494464 WASF1Q92558 559 aa14.92□□□□□ -0.02
ERCC3-209ENST00000494464 SLC5A5Q92911 643 aa14.92□□□□□ -0.02
ERCC3-209ENST00000494464 MBOAT7Q96N66 472 aa14.92□□□□□ -0.02
ERCC3-209ENST00000494464 PRDM12Q9H4Q4 367 aa14.92□□□□□ -0.02
ERCC3-209ENST00000494464 PCDHA10Q9Y5I2 948 aa14.92□□□□□ -0.02
ERCC3-209ENST00000494464 MAFBQ9Y5Q3 323 aaPredicted RBP14.92□□□□□ -0.02
ERCC3-209ENST00000494464 IGSF9BQ9UPX0 1349 aa14.92□□□□□ -0.02
ERCC3-209ENST00000494464 UNC80Q8N2C7 3258 aa14.91□□□□□ -0.02
ERCC3-209ENST00000494464 SMIM35A0A1B0GVV1 85 aa14.91□□□□□ -0.02
ERCC3-209ENST00000494464 WDR64B1ANS9 1081 aa14.91□□□□□ -0.02
ERCC3-209ENST00000494464 CHRNA1P02708 482 aa14.91□□□□□ -0.02
ERCC3-209ENST00000494464 PSAPP07602 524 aa14.91□□□□□ -0.02
ERCC3-209ENST00000494464 MRPS6P82932 125 aaKnown RBP14.91□□□□□ -0.02
ERCC3-209ENST00000494464 SLC17A8Q8NDX2 589 aa14.91□□□□□ -0.02
ERCC3-209ENST00000494464 DNAJB3Q8WWF6 145 aa14.91□□□□□ -0.02
ERCC3-209ENST00000494464 IFIH1Q9BYX4 1025 aaKnown RBP14.91□□□□□ -0.02
ERCC3-209ENST00000494464 OSBPL7Q9BZF2 842 aa14.91□□□□□ -0.02
ERCC3-209ENST00000494464 ORC3Q9UBD5 711 aaPredicted RBP14.91□□□□□ -0.02
ERCC3-209ENST00000494464 KCNJ14Q9UNX9 436 aa14.91□□□□□ -0.02
ERCC3-209ENST00000494464 PCDHA2Q9Y5H9 948 aa14.91□□□□□ -0.02
ERCC3-209ENST00000494464 SQORQ9Y6N5 450 aa14.91□□□□□ -0.02
ERCC3-209ENST00000494464 TDP2O95551 362 aa14.9□□□□□ -0.02
ERCC3-209ENST00000494464 AMHP03971 560 aa14.9□□□□□ -0.02
ERCC3-209ENST00000494464 SFNP31947 248 aa14.9□□□□□ -0.02
ERCC3-209ENST00000494464 TAP1Q03518 808 aa14.9□□□□□ -0.02
ERCC3-209ENST00000494464 ZNF484Q5JVG2 852 aa14.9□□□□□ -0.02
ERCC3-209ENST00000494464 LRCH2Q5VUJ6 765 aa14.9□□□□□ -0.02
ERCC3-209ENST00000494464 SWSAP1Q6NVH7 229 aa14.9□□□□□ -0.02
ERCC3-209ENST00000494464 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.9□□□□□ -0.02
ERCC3-209ENST00000494464 NECAB1Q8N987 351 aa14.9□□□□□ -0.02
ERCC3-209ENST00000494464 NSUN7Q8NE18 718 aaKnown RBP14.9□□□□□ -0.02
ERCC3-209ENST00000494464 TRAPPC12Q8WVT3 735 aa14.9□□□□□ -0.02
ERCC3-209ENST00000494464 BBXQ8WY36 941 aaPredicted RBP14.9□□□□□ -0.02
ERCC3-209ENST00000494464 UIMC1Q96RL1 719 aa14.9□□□□□ -0.02
ERCC3-209ENST00000494464 RAD9AQ99638 391 aa14.9□□□□□ -0.02
ERCC3-209ENST00000494464 TEKT3Q9BXF9 490 aa14.9□□□□□ -0.02
ERCC3-209ENST00000494464 CDY2AQ9Y6F7 541 aa14.9□□□□□ -0.02
ERCC3-209ENST00000494464 LOXHD1Q8IVV2 1947 aa14.89□□□□□ -0.03
ERCC3-209ENST00000494464 KDM3AQ9Y4C1 1321 aa14.89□□□□□ -0.03
ERCC3-209ENST00000494464 CCDC194A0A1B0GVG4 234 aa14.89□□□□□ -0.03
ERCC3-209ENST00000494464 ZBTB42B2RXF5 422 aa14.89□□□□□ -0.03
ERCC3-209ENST00000494464 GAS7O60861 476 aa14.89□□□□□ -0.03
ERCC3-209ENST00000494464 PSMD10O75832 226 aa14.89□□□□□ -0.03
ERCC3-209ENST00000494464 ARHGEF15O94989 841 aa14.89□□□□□ -0.03
ERCC3-209ENST00000494464 HSP90AA1P07900 732 aaKnown RBP14.89□□□□□ -0.03
ERCC3-209ENST00000494464 GHRP10912 638 aa14.89□□□□□ -0.03
ERCC3-209ENST00000494464 FDPSP14324 419 aaKnown RBP14.89□□□□□ -0.03
ERCC3-209ENST00000494464 ATP4AP20648 1035 aa14.89□□□□□ -0.03
ERCC3-209ENST00000494464 JAK3P52333 1124 aa14.89□□□□□ -0.03
ERCC3-209ENST00000494464 LPIN1Q14693 890 aa14.89□□□□□ -0.03
ERCC3-209ENST00000494464 NFKBIBQ15653 356 aa14.89□□□□□ -0.03
ERCC3-209ENST00000494464 FBXO47Q5MNV8 452 aa14.89□□□□□ -0.03
ERCC3-209ENST00000494464 IER5Q5VY09 327 aa14.89□□□□□ -0.03
ERCC3-209ENST00000494464 MTHFD1LQ6UB35 978 aa14.89□□□□□ -0.03
ERCC3-209ENST00000494464 TSHZ1Q6ZSZ6 1077 aa14.89□□□□□ -0.03
ERCC3-209ENST00000494464 TMCO2Q7Z6W1 182 aaPredicted RBP14.89□□□□□ -0.03
ERCC3-209ENST00000494464 RDM1Q8NG50 284 aa14.89□□□□□ -0.03
ERCC3-209ENST00000494464 ETNPPLQ8TBG4 499 aa14.89□□□□□ -0.03
ERCC3-209ENST00000494464 ZBTB10Q96DT7 871 aa14.89□□□□□ -0.03
ERCC3-209ENST00000494464 FAM167AQ96KS9 214 aa14.89□□□□□ -0.03
ERCC3-209ENST00000494464 ZBED2Q9BTP6 218 aa14.89□□□□□ -0.03
ERCC3-209ENST00000494464 FAM49AQ9H0Q0 323 aaPredicted RBP14.89□□□□□ -0.03
ERCC3-209ENST00000494464 DISC1Q9NRI5 854 aa14.89□□□□□ -0.03
ERCC3-209ENST00000494464 TRPV2Q9Y5S1 764 aa14.89□□□□□ -0.03
ERCC3-209ENST00000494464 PRUNE2Q8WUY3 3088 aa14.89□□□□□ -0.03
ERCC3-209ENST00000494464 LCHNA4D1U4 455 aa14.88□□□□□ -0.03
ERCC3-209ENST00000494464 M0QZ92 97 aa14.88□□□□□ -0.03
ERCC3-209ENST00000494464 GCFC2P16383 781 aaKnown RBP14.88□□□□□ -0.03
ERCC3-209ENST00000494464 HTRA4P83105 476 aaPredicted RBP14.88□□□□□ -0.03
ERCC3-209ENST00000494464 ADGRE1Q14246 886 aa14.88□□□□□ -0.03
ERCC3-209ENST00000494464 INF2Q27J81 1249 aa14.88□□□□□ -0.03
ERCC3-209ENST00000494464 B3GNT9Q6UX72 402 aa14.88□□□□□ -0.03
ERCC3-209ENST00000494464 NEK8Q86SG6 692 aa14.88□□□□□ -0.03
ERCC3-209ENST00000494464 MYOCDQ8IZQ8 938 aa14.88□□□□□ -0.03
ERCC3-209ENST00000494464 NME8Q8N427 588 aa14.88□□□□□ -0.03
ERCC3-209ENST00000494464 USP38Q8NB14 1042 aa14.88□□□□□ -0.03
ERCC3-209ENST00000494464 UNC45AQ9H3U1 944 aa14.88□□□□□ -0.03
ERCC3-209ENST00000494464 GJB4Q9NTQ9 266 aa14.88□□□□□ -0.03
ERCC3-209ENST00000494464 GABBR1Q9UBS5 961 aa14.88□□□□□ -0.03
ERCC3-209ENST00000494464 CEP131Q9UPN4 1083 aa14.88□□□□□ -0.03
ERCC3-209ENST00000494464 SAMM50Q9Y512 469 aa14.88□□□□□ -0.03
ERCC3-209ENST00000494464 TRANK1O15050 2925 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms