RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 FOXD4L4Q8WXT5 416 aaPredicted RBP14□□□□□ -0.17
TRA2A-209ENST00000494255 EIF2AK1Q9BQI3 630 aaKnown RBP14□□□□□ -0.17
TRA2A-209ENST00000494255 NOC4LQ9BVI4 516 aaKnown RBP14□□□□□ -0.17
TRA2A-209ENST00000494255 DAXXQ9UER7 740 aaPredicted RBP14□□□□□ -0.17
TRA2A-209ENST00000494255 TUBE1Q9UJT0 475 aa14□□□□□ -0.17
TRA2A-209ENST00000494255 COL1A2P08123 1366 aa14□□□□□ -0.17
TRA2A-209ENST00000494255 ZNF862O60290 1169 aa13.99□□□□□ -0.17
TRA2A-209ENST00000494255 FXR2P51116 673 aaKnown RBP eCLIP13.99□□□□□ -0.17
TRA2A-209ENST00000494255 ADAM17P78536 824 aa13.99□□□□□ -0.17
TRA2A-209ENST00000494255 XKR3Q5GH77 459 aa13.99□□□□□ -0.17
TRA2A-209ENST00000494255 PRPF38BQ5VTL8 546 aaKnown RBP13.99□□□□□ -0.17
TRA2A-209ENST00000494255 DTHD1Q6ZMT9 781 aa13.99□□□□□ -0.17
TRA2A-209ENST00000494255 SERINC5Q86VE9 423 aa13.99□□□□□ -0.17
TRA2A-209ENST00000494255 DYDC2Q96IM9 177 aa13.99□□□□□ -0.17
TRA2A-209ENST00000494255 LXNQ9BS40 222 aa13.99□□□□□ -0.17
TRA2A-209ENST00000494255 ZSWIM4Q9H7M6 989 aa13.99□□□□□ -0.17
TRA2A-209ENST00000494255 MKI67P46013 3256 aaKnown RBP13.99□□□□□ -0.17
TRA2A-209ENST00000494255 LTBP2Q14767 1821 aa13.99□□□□□ -0.17
TRA2A-209ENST00000494255 DDX11L8A8MPP1 907 aa13.98□□□□□ -0.17
TRA2A-209ENST00000494255 PITPNM1O00562 1244 aa13.98□□□□□ -0.17
TRA2A-209ENST00000494255 F13A1P00488 732 aa13.98□□□□□ -0.17
TRA2A-209ENST00000494255 CYP2C18P33260 490 aa13.98□□□□□ -0.17
TRA2A-209ENST00000494255 MDM2Q00987 491 aaPredicted RBP13.98□□□□□ -0.17
TRA2A-209ENST00000494255 CYP4A11Q02928 519 aa13.98□□□□□ -0.17
TRA2A-209ENST00000494255 SF3A1Q15459 793 aaKnown RBP13.98□□□□□ -0.17
TRA2A-209ENST00000494255 ARL6IP4Q66PJ3 421 aaKnown RBP13.98□□□□□ -0.17
TRA2A-209ENST00000494255 TAF2Q6P1X5 1199 aa13.98□□□□□ -0.17
TRA2A-209ENST00000494255 RSPH3Q86UC2 560 aa13.98□□□□□ -0.17
TRA2A-209ENST00000494255 TPH2Q8IWU9 490 aa13.98□□□□□ -0.17
TRA2A-209ENST00000494255 TMEM199Q8N511 208 aa13.98□□□□□ -0.17
TRA2A-209ENST00000494255 TRAPPC12Q8WVT3 735 aa13.98□□□□□ -0.17
TRA2A-209ENST00000494255 BADQ92934 168 aa13.98□□□□□ -0.17
TRA2A-209ENST00000494255 ZNF396Q96N95 335 aaPredicted RBP13.98□□□□□ -0.17
TRA2A-209ENST00000494255 CTAGE1Q96RT6 745 aa13.98□□□□□ -0.17
TRA2A-209ENST00000494255 RGL1Q9NZL6 768 aa13.98□□□□□ -0.17
TRA2A-209ENST00000494255 SEPT9Q9UHD8 586 aaPredicted RBP13.98□□□□□ -0.17
TRA2A-209ENST00000494255 STK24Q9Y6E0 443 aa13.98□□□□□ -0.17
TRA2A-209ENST00000494255 MBLAC1A4D2B0 266 aaPredicted RBP13.98□□□□□ -0.17
TRA2A-209ENST00000494255 MAGEA10P43363 369 aaPredicted RBP13.98□□□□□ -0.17
TRA2A-209ENST00000494255 CTTNQ14247 550 aaKnown RBP13.98□□□□□ -0.17
TRA2A-209ENST00000494255 PDIA5Q14554 519 aa13.98□□□□□ -0.17
TRA2A-209ENST00000494255 HAUS3Q68CZ6 603 aa13.98□□□□□ -0.17
TRA2A-209ENST00000494255 MFSD5Q6N075 450 aa13.98□□□□□ -0.17
TRA2A-209ENST00000494255 FAM173BQ6P4H8 233 aa13.98□□□□□ -0.17
TRA2A-209ENST00000494255 C4orf19Q8IY42 314 aa13.98□□□□□ -0.17
TRA2A-209ENST00000494255 DHX38Q92620 1227 aaKnown RBP13.98□□□□□ -0.17
TRA2A-209ENST00000494255 LRWD1Q9UFC0 647 aa13.98□□□□□ -0.17
TRA2A-209ENST00000494255 MYH15Q9Y2K3 1946 aa13.98□□□□□ -0.17
TRA2A-209ENST00000494255 TNRC18O15417 2968 aaPredicted RBP13.97□□□□□ -0.17
TRA2A-209ENST00000494255 UMODL1Q5DID0 1318 aa13.97□□□□□ -0.17
TRA2A-209ENST00000494255 CAND2O75155 1236 aa13.97□□□□□ -0.17
TRA2A-209ENST00000494255 RPLP2P05387 115 aaKnown RBP13.97□□□□□ -0.17
TRA2A-209ENST00000494255 ITGB8P26012 769 aa13.97□□□□□ -0.17
TRA2A-209ENST00000494255 KLRC1P26715 233 aa13.97□□□□□ -0.17
TRA2A-209ENST00000494255 THPOP40225 353 aa13.97□□□□□ -0.17
TRA2A-209ENST00000494255 CCL23P55773 120 aa13.97□□□□□ -0.17
TRA2A-209ENST00000494255 FPGSQ05932 587 aa13.97□□□□□ -0.17
TRA2A-209ENST00000494255 RBL2Q08999 1139 aa13.97□□□□□ -0.17
TRA2A-209ENST00000494255 PKP1Q13835 747 aa13.97□□□□□ -0.17
TRA2A-209ENST00000494255 MARCH8Q5T0T0 291 aa13.97□□□□□ -0.17
TRA2A-209ENST00000494255 MTHFD1LQ6UB35 978 aa13.97□□□□□ -0.17
TRA2A-209ENST00000494255 OTUD6AQ7L8S5 288 aa13.97□□□□□ -0.17
TRA2A-209ENST00000494255 NIFKQ9BYG3 293 aaKnown RBP13.97□□□□□ -0.17
TRA2A-209ENST00000494255 TUFT1Q9NNX1 390 aa13.97□□□□□ -0.17
TRA2A-209ENST00000494255 CLIC4Q9Y696 253 aa13.97□□□□□ -0.17
TRA2A-209ENST00000494255 DNAH12Q6ZR08 3092 aa13.97□□□□□ -0.17
TRA2A-209ENST00000494255 VWA3AA6NCI4 1184 aa13.96□□□□□ -0.17
TRA2A-209ENST00000494255 MAGEB2O15479 319 aa13.96□□□□□ -0.17
TRA2A-209ENST00000494255 SLITRK3O94933 977 aa13.96□□□□□ -0.17
TRA2A-209ENST00000494255 CKBP12277 381 aa13.96□□□□□ -0.17
TRA2A-209ENST00000494255 SELPP16109 830 aa13.96□□□□□ -0.17
TRA2A-209ENST00000494255 CCT6AP40227 531 aaKnown RBP13.96□□□□□ -0.17
TRA2A-209ENST00000494255 CEBPZQ03701 1054 aaKnown RBP13.96□□□□□ -0.17
TRA2A-209ENST00000494255 TBC1D8BQ0IIM8 1120 aa13.96□□□□□ -0.17
TRA2A-209ENST00000494255 PPIGQ13427 754 aaKnown RBP eCLIP13.96□□□□□ -0.173e-6■■■□□ 17
TRA2A-209ENST00000494255 TRIM71Q2Q1W2 868 aaKnown RBP13.96□□□□□ -0.17
TRA2A-209ENST00000494255 MTERF2Q49AM1 385 aa13.96□□□□□ -0.17
TRA2A-209ENST00000494255 RUFY4Q6ZNE9 571 aa13.96□□□□□ -0.17
TRA2A-209ENST00000494255 IGSF22Q8N9C0 903 aa13.96□□□□□ -0.17
TRA2A-209ENST00000494255 CCDC43Q96MW1 224 aaKnown RBP13.96□□□□□ -0.17
TRA2A-209ENST00000494255 HSD17B14Q9BPX1 270 aa13.96□□□□□ -0.17
TRA2A-209ENST00000494255 POLR3CQ9BUI4 534 aaPredicted RBP13.96□□□□□ -0.17
TRA2A-209ENST00000494255 PCDH10Q9P2E7 1040 aa13.96□□□□□ -0.17
TRA2A-209ENST00000494255 PCDHA2Q9Y5H9 948 aa13.96□□□□□ -0.17
TRA2A-209ENST00000494255 ZBTB42B2RXF5 422 aa13.95□□□□□ -0.18
TRA2A-209ENST00000494255 LYPLA2O95372 231 aa13.95□□□□□ -0.18
TRA2A-209ENST00000494255 PARNO95453 639 aaKnown RBP13.95□□□□□ -0.18
TRA2A-209ENST00000494255 RPA1P27694 616 aa13.95□□□□□ -0.18
TRA2A-209ENST00000494255 YWHABP31946 246 aaKnown RBP13.95□□□□□ -0.18
TRA2A-209ENST00000494255 KRT79Q5XKE5 535 aa13.95□□□□□ -0.18
TRA2A-209ENST00000494255 LRRC8DQ7L1W4 858 aa13.95□□□□□ -0.18
TRA2A-209ENST00000494255 SNX29Q8TEQ0 813 aa13.95□□□□□ -0.18
TRA2A-209ENST00000494255 WNT8BQ93098 351 aa13.95□□□□□ -0.18
TRA2A-209ENST00000494255 USP28Q96RU2 1077 aa13.95□□□□□ -0.18
TRA2A-209ENST00000494255 FTOQ9C0B1 505 aaKnown RBP eCLIP13.95□□□□□ -0.18
TRA2A-209ENST00000494255 UBE2OQ9C0C9 1292 aaKnown RBP13.95□□□□□ -0.18
TRA2A-209ENST00000494255 FAM49AQ9H0Q0 323 aaPredicted RBP13.95□□□□□ -0.18
TRA2A-209ENST00000494255 WNT8AQ9H1J5 351 aa13.95□□□□□ -0.18
TRA2A-209ENST00000494255 WRAP73Q9P2S5 460 aaPredicted RBP13.95□□□□□ -0.18
TRA2A-209ENST00000494255 PPME1Q9Y570 386 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms