RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 PVALEFA0A1B0GWK0 134 aa20.63■□□□□ 0.89
COL27A1-207ENST00000494090 MGEA5O60502 916 aa20.63■□□□□ 0.89
COL27A1-207ENST00000494090 HSPA8P11142 646 aaKnown RBP20.63■□□□□ 0.89
COL27A1-207ENST00000494090 ANXA13P27216 316 aa20.63■□□□□ 0.89
COL27A1-207ENST00000494090 MTERF2Q49AM1 385 aa20.63■□□□□ 0.89
COL27A1-207ENST00000494090 FAM167AQ96KS9 214 aa20.63■□□□□ 0.89
COL27A1-207ENST00000494090 AP1M1Q9BXS5 423 aa20.63■□□□□ 0.89
COL27A1-207ENST00000494090 SESN3P58005 492 aa20.62■□□□□ 0.89
COL27A1-207ENST00000494090 BZW1Q7L1Q6 419 aaKnown RBP20.62■□□□□ 0.89
COL27A1-207ENST00000494090 RPF1Q9H9Y2 349 aaKnown RBP20.62■□□□□ 0.89
COL27A1-207ENST00000494090 ORC2Q13416 577 aaPredicted RBP20.62■□□□□ 0.89
COL27A1-207ENST00000494090 GIMAP8Q8ND71 665 aaPredicted RBP20.62■□□□□ 0.89
COL27A1-207ENST00000494090 CCNYQ8ND76 341 aa20.62■□□□□ 0.89
COL27A1-207ENST00000494090 LCMT1Q9UIC8 334 aa20.62■□□□□ 0.89
COL27A1-207ENST00000494090 SLC8A2Q9UPR5 921 aa20.62■□□□□ 0.89
COL27A1-207ENST00000494090 RAD17O75943 681 aa20.62■□□□□ 0.89
COL27A1-207ENST00000494090 RFC1P35251 1148 aaPredicted RBP20.62■□□□□ 0.89
COL27A1-207ENST00000494090 CCDC144BQ3MJ40 725 aa20.62■□□□□ 0.89
COL27A1-207ENST00000494090 C6orf118Q5T5N4 469 aa20.62■□□□□ 0.89
COL27A1-207ENST00000494090 DHX40Q8IX18 779 aaKnown RBP20.62■□□□□ 0.89
COL27A1-207ENST00000494090 LRGUKQ96M69 825 aa20.62■□□□□ 0.89
COL27A1-207ENST00000494090 BHMT2Q9H2M3 363 aa20.62■□□□□ 0.89
COL27A1-207ENST00000494090 IQCB1Q15051 598 aa20.62■□□□□ 0.89
COL27A1-207ENST00000494090 NFU1Q9UMS0 254 aa20.62■□□□□ 0.89
COL27A1-207ENST00000494090 PALLDQ8WX93 1383 aa20.61■□□□□ 0.89
COL27A1-207ENST00000494090 GOLGA8SH3BPF8 625 aa20.61■□□□□ 0.89
COL27A1-207ENST00000494090 ARAP3Q8WWN8 1544 aa20.61■□□□□ 0.89
COL27A1-207ENST00000494090 PRPSAP2O60256 369 aa20.61■□□□□ 0.89
COL27A1-207ENST00000494090 ZKSCAN8Q15776 578 aaPredicted RBP20.61■□□□□ 0.89
COL27A1-207ENST00000494090 UNC13BO14795 1591 aa20.61■□□□□ 0.89
COL27A1-207ENST00000494090 RPS6KA4O75676 772 aa20.61■□□□□ 0.89
COL27A1-207ENST00000494090 PRCPP42785 496 aa20.61■□□□□ 0.89
COL27A1-207ENST00000494090 ENAHQ8N8S7 591 aaPredicted RBP20.61■□□□□ 0.89
COL27A1-207ENST00000494090 OXER1Q8TDS5 423 aa20.61■□□□□ 0.89
COL27A1-207ENST00000494090 SH3RF3Q8TEJ3 882 aaPredicted RBP20.61■□□□□ 0.89
COL27A1-207ENST00000494090 OPHN1O60890 802 aa20.61■□□□□ 0.89
COL27A1-207ENST00000494090 ADCY2Q08462 1091 aa20.61■□□□□ 0.89
COL27A1-207ENST00000494090 TERF2Q15554 542 aa20.61■□□□□ 0.89
COL27A1-207ENST00000494090 ARL13BQ3SXY8 428 aa20.61■□□□□ 0.89
COL27A1-207ENST00000494090 CC2D1AQ6P1N0 951 aaPredicted RBP20.61■□□□□ 0.89
COL27A1-207ENST00000494090 DNAAF3Q8N9W5 541 aa20.61■□□□□ 0.89
COL27A1-207ENST00000494090 CDC27P30260 824 aa20.6■□□□□ 0.89
COL27A1-207ENST00000494090 RWDD2BP57060 319 aa20.6■□□□□ 0.89
COL27A1-207ENST00000494090 THOC5Q13769 683 aaKnown RBP20.6■□□□□ 0.89
COL27A1-207ENST00000494090 KIF2CQ99661 725 aa20.6■□□□□ 0.89
COL27A1-207ENST00000494090 TRIM49BA6NDI0 452 aa20.6■□□□□ 0.89
COL27A1-207ENST00000494090 WDR64B1ANS9 1081 aa20.6■□□□□ 0.89
COL27A1-207ENST00000494090 TTI1O43156 1089 aa20.6■□□□□ 0.89
COL27A1-207ENST00000494090 SEMA3FQ13275 785 aa20.6■□□□□ 0.89
COL27A1-207ENST00000494090 CTTNQ14247 550 aaKnown RBP20.6■□□□□ 0.89
COL27A1-207ENST00000494090 TBC1D10BQ4KMP7 808 aaPredicted RBP20.6■□□□□ 0.89
COL27A1-207ENST00000494090 RNF139Q8WU17 664 aa20.6■□□□□ 0.89
COL27A1-207ENST00000494090 TMEM47Q9BQJ4 181 aa20.6■□□□□ 0.89
COL27A1-207ENST00000494090 SCINQ9Y6U3 715 aa20.6■□□□□ 0.89
COL27A1-207ENST00000494090 LRRC7Q96NW7 1537 aa20.6■□□□□ 0.89
COL27A1-207ENST00000494090 SLCO1A2P46721 670 aa20.6■□□□□ 0.89
COL27A1-207ENST00000494090 KLHL29Q96CT2 875 aa20.6■□□□□ 0.89
COL27A1-207ENST00000494090 TUBB6Q9BUF5 446 aa20.6■□□□□ 0.89
COL27A1-207ENST00000494090 NXF1Q9UBU9 619 aaKnown RBP20.6■□□□□ 0.89
COL27A1-207ENST00000494090 TLK1Q9UKI8 766 aa20.6■□□□□ 0.89
COL27A1-207ENST00000494090 UBN2Q6ZU65 1347 aa20.6■□□□□ 0.89
COL27A1-207ENST00000494090 GCKP35557 465 aa20.6■□□□□ 0.89
COL27A1-207ENST00000494090 OR6B2Q6IFH4 312 aa20.6■□□□□ 0.89
COL27A1-207ENST00000494090 KSR1Q8IVT5 923 aa20.6■□□□□ 0.89
COL27A1-207ENST00000494090 ATP6V1E2Q96A05 226 aa20.6■□□□□ 0.89
COL27A1-207ENST00000494090 SLC10A4Q96EP9 437 aa20.6■□□□□ 0.89
COL27A1-207ENST00000494090 KIAA1586Q9HCI6 787 aa20.6■□□□□ 0.89
COL27A1-207ENST00000494090 PALMO75781 387 aa20.59■□□□□ 0.89
COL27A1-207ENST00000494090 RYBPQ8N488 228 aaPredicted RBP20.59■□□□□ 0.89
COL27A1-207ENST00000494090 RAD54LQ92698 747 aa20.59■□□□□ 0.89
COL27A1-207ENST00000494090 K7ERI5 159 aa20.59■□□□□ 0.89
COL27A1-207ENST00000494090 PODXLO00592 558 aa20.59■□□□□ 0.89
COL27A1-207ENST00000494090 MT-ND3P03897 115 aa20.59■□□□□ 0.89
COL27A1-207ENST00000494090 CYP2D6P10635 497 aa20.59■□□□□ 0.89
COL27A1-207ENST00000494090 CALR3Q96L12 384 aaKnown RBP20.59■□□□□ 0.89
COL27A1-207ENST00000494090 GCNAQ96QF7 691 aa20.59■□□□□ 0.89
COL27A1-207ENST00000494090 CDC42BPBQ9Y5S2 1711 aa20.59■□□□□ 0.89
COL27A1-207ENST00000494090 FGGP02679 453 aa20.59■□□□□ 0.89
COL27A1-207ENST00000494090 PPP1R18Q6NYC8 613 aa20.59■□□□□ 0.89
COL27A1-207ENST00000494090 TXLNGQ9NUQ3 528 aa20.59■□□□□ 0.89
COL27A1-207ENST00000494090 PLEKHG2Q9H7P9 1386 aa20.59■□□□□ 0.89
COL27A1-207ENST00000494090 CDC42BPAQ5VT25 1732 aa20.59■□□□□ 0.89
COL27A1-207ENST00000494090 VGLL3A8MV65 326 aa20.59■□□□□ 0.89
COL27A1-207ENST00000494090 ZBTB5O15062 677 aa20.59■□□□□ 0.89
COL27A1-207ENST00000494090 PRR29P0C7W0 189 aa20.59■□□□□ 0.89
COL27A1-207ENST00000494090 CASP1P29466 404 aa20.59■□□□□ 0.89
COL27A1-207ENST00000494090 SERPINB6P35237 376 aa20.59■□□□□ 0.89
COL27A1-207ENST00000494090 PPARGP37231 505 aaPredicted RBP20.59■□□□□ 0.89
COL27A1-207ENST00000494090 ADCY1Q08828 1119 aa20.59■□□□□ 0.89
COL27A1-207ENST00000494090 DARS2Q6PI48 645 aaKnown RBP20.59■□□□□ 0.89
COL27A1-207ENST00000494090 KCTD6Q8NC69 237 aa20.59■□□□□ 0.89
COL27A1-207ENST00000494090 COG7P83436 770 aa20.58■□□□□ 0.89
COL27A1-207ENST00000494090 SGMS1Q86VZ5 419 aa20.58■□□□□ 0.89
COL27A1-207ENST00000494090 C7orf31Q8N865 590 aa20.58■□□□□ 0.89
COL27A1-207ENST00000494090 STMN1P16949 149 aa20.58■□□□□ 0.89
COL27A1-207ENST00000494090 RNF207Q6ZRF8 634 aa20.58■□□□□ 0.89
COL27A1-207ENST00000494090 MCPH1Q8NEM0 835 aa20.58■□□□□ 0.89
COL27A1-207ENST00000494090 MYCBPQ99417 103 aaPredicted RBP20.58■□□□□ 0.89
COL27A1-207ENST00000494090 MIF4GDA9UHW6 222 aaKnown RBP20.58■□□□□ 0.89
COL27A1-207ENST00000494090 GNAT1P11488 350 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms