RNA–Protein interactions for RNA: ENST00000494012.1

MACF1-222, Transcript of microtubule-actin crosslinking factor 1, human

TSL 4

Gene MACF1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-222	ENST00000494012	QARS	P47897	775 aa	Known RBP	11.22	□□□□□ -0.61
MACF1-222	ENST00000494012	ADAM17	P78536	824 aa		11.22	□□□□□ -0.61
MACF1-222	ENST00000494012	MDM2	Q00987	491 aa	Predicted RBP	11.22	□□□□□ -0.61
MACF1-222	ENST00000494012	RBL2	Q08999	1139 aa		11.22	□□□□□ -0.61
MACF1-222	ENST00000494012	PTGDR	Q13258	359 aa		11.22	□□□□□ -0.61
MACF1-222	ENST00000494012	NBR1	Q14596	966 aa		11.22	□□□□□ -0.61
MACF1-222	ENST00000494012	EPHA7	Q15375	998 aa		11.22	□□□□□ -0.61
MACF1-222	ENST00000494012	ZNF484	Q5JVG2	852 aa		11.22	□□□□□ -0.61
MACF1-222	ENST00000494012	RSPH3	Q86UC2	560 aa		11.22	□□□□□ -0.61
MACF1-222	ENST00000494012	FERMT3	Q86UX7	667 aa		11.22	□□□□□ -0.61
MACF1-222	ENST00000494012	ERMN	Q8TAM6	284 aa		11.22	□□□□□ -0.61
MACF1-222	ENST00000494012	BAD	Q92934	168 aa		11.22	□□□□□ -0.61
MACF1-222	ENST00000494012	CTAGE1	Q96RT6	745 aa		11.22	□□□□□ -0.61
MACF1-222	ENST00000494012	TMEM60	Q9H2L4	133 aa		11.22	□□□□□ -0.61
MACF1-222	ENST00000494012	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	11.22	□□□□□ -0.61
MACF1-222	ENST00000494012	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	11.22	□□□□□ -0.61
MACF1-222	ENST00000494012	NRBP2	Q9NSY0	501 aa		11.22	□□□□□ -0.61
MACF1-222	ENST00000494012	MTMR6	Q9Y217	621 aa		11.22	□□□□□ -0.61
MACF1-222	ENST00000494012	MBLAC1	A4D2B0	266 aa	Predicted RBP	11.21	□□□□□ -0.61
MACF1-222	ENST00000494012	EML1	O00423	815 aa		11.21	□□□□□ -0.61
MACF1-222	ENST00000494012	TREH	O43280	583 aa		11.21	□□□□□ -0.61
MACF1-222	ENST00000494012	PARN	O95453	639 aa	Known RBP	11.21	□□□□□ -0.61
MACF1-222	ENST00000494012	P4HB	P07237	508 aa	Known RBP	11.21	□□□□□ -0.61
MACF1-222	ENST00000494012	PFKM	P08237	780 aa		11.21	□□□□□ -0.61
MACF1-222	ENST00000494012	SELP	P16109	830 aa		11.21	□□□□□ -0.61
MACF1-222	ENST00000494012	ITGB8	P26012	769 aa		11.21	□□□□□ -0.61
MACF1-222	ENST00000494012	CYP2C18	P33260	490 aa		11.21	□□□□□ -0.61
MACF1-222	ENST00000494012	BMP8B	P34820	402 aa		11.21	□□□□□ -0.61
MACF1-222	ENST00000494012	RFC2	P35250	354 aa		11.21	□□□□□ -0.61
MACF1-222	ENST00000494012	FXR2	P51116	673 aa	Known RBP eCLIP	11.21	□□□□□ -0.61	1e-6	■■■□□ 14.7
MACF1-222	ENST00000494012	IGBP1	P78318	339 aa		11.21	□□□□□ -0.61
MACF1-222	ENST00000494012	ZNF200	P98182	395 aa	Predicted RBP	11.21	□□□□□ -0.61
MACF1-222	ENST00000494012	ATP2C1	P98194	919 aa	Predicted RBP	11.21	□□□□□ -0.61
MACF1-222	ENST00000494012	REST	Q13127	1097 aa		11.21	□□□□□ -0.61
MACF1-222	ENST00000494012	PPIG	Q13427	754 aa	Known RBP eCLIP	11.21	□□□□□ -0.61	6e-7	■■■□□ 17.6
MACF1-222	ENST00000494012	HIC1	Q14526	733 aa		11.21	□□□□□ -0.61
MACF1-222	ENST00000494012	UGCG	Q16739	394 aa		11.21	□□□□□ -0.61
MACF1-222	ENST00000494012	XKR3	Q5GH77	459 aa		11.21	□□□□□ -0.61
MACF1-222	ENST00000494012	HAUS3	Q68CZ6	603 aa		11.21	□□□□□ -0.61
MACF1-222	ENST00000494012	CHRDL2	Q6WN34	429 aa		11.21	□□□□□ -0.61
MACF1-222	ENST00000494012	LRRC8D	Q7L1W4	858 aa		11.21	□□□□□ -0.61
MACF1-222	ENST00000494012	BANK1	Q8NDB2	785 aa		11.21	□□□□□ -0.61
MACF1-222	ENST00000494012	GDF15	Q99988	308 aa		11.21	□□□□□ -0.61
MACF1-222	ENST00000494012	LXN	Q9BS40	222 aa		11.21	□□□□□ -0.61
MACF1-222	ENST00000494012	UBE2O	Q9C0C9	1292 aa	Known RBP	11.21	□□□□□ -0.61
MACF1-222	ENST00000494012	ZSWIM4	Q9H7M6	989 aa		11.21	□□□□□ -0.61
MACF1-222	ENST00000494012	SEPT9	Q9UHD8	586 aa	Predicted RBP	11.21	□□□□□ -0.61
MACF1-222	ENST00000494012	STK24	Q9Y6E0	443 aa		11.21	□□□□□ -0.61
MACF1-222	ENST00000494012	SCN5A	Q14524	2016 aa		11.21	□□□□□ -0.62
MACF1-222	ENST00000494012	UMODL1	Q5DID0	1318 aa		11.2	□□□□□ -0.62
MACF1-222	ENST00000494012		A0A1W2PPC1	479 aa		11.2	□□□□□ -0.62
MACF1-222	ENST00000494012	POTEM	A6NI47	508 aa		11.2	□□□□□ -0.62
MACF1-222	ENST00000494012	ZNF862	O60290	1169 aa		11.2	□□□□□ -0.62
MACF1-222	ENST00000494012	CKB	P12277	381 aa		11.2	□□□□□ -0.62
MACF1-222	ENST00000494012	CSF2RA	P15509	400 aa		11.2	□□□□□ -0.62
MACF1-222	ENST00000494012	ATP4A	P20648	1035 aa		11.2	□□□□□ -0.62
MACF1-222	ENST00000494012	THPO	P40225	353 aa		11.2	□□□□□ -0.62
MACF1-222	ENST00000494012	TEC	P42680	631 aa		11.2	□□□□□ -0.62
MACF1-222	ENST00000494012	FXR1	P51114	621 aa	Known RBP eCLIP	11.2	□□□□□ -0.62
MACF1-222	ENST00000494012	MARCH8	Q5T0T0	291 aa		11.2	□□□□□ -0.62
MACF1-222	ENST00000494012	ARL6IP4	Q66PJ3	421 aa	Known RBP	11.2	□□□□□ -0.62
MACF1-222	ENST00000494012	DTHD1	Q6ZMT9	781 aa		11.2	□□□□□ -0.62
MACF1-222	ENST00000494012	SPRYD3	Q8NCJ5	442 aa		11.2	□□□□□ -0.62
MACF1-222	ENST00000494012	DHX38	Q92620	1227 aa	Known RBP	11.2	□□□□□ -0.62
MACF1-222	ENST00000494012	WNT8A	Q9H1J5	351 aa		11.2	□□□□□ -0.62
MACF1-222	ENST00000494012	PCDHA2	Q9Y5H9	948 aa		11.2	□□□□□ -0.62
MACF1-222	ENST00000494012	SI	P14410	1827 aa		11.2	□□□□□ -0.62
MACF1-222	ENST00000494012	EVPL	Q92817	2033 aa		11.19	□□□□□ -0.62
MACF1-222	ENST00000494012	SMIM35	A0A1B0GVV1	85 aa		11.19	□□□□□ -0.62
MACF1-222	ENST00000494012	ZBTB42	B2RXF5	422 aa		11.19	□□□□□ -0.62
MACF1-222	ENST00000494012	MAGEB2	O15479	319 aa		11.19	□□□□□ -0.62
MACF1-222	ENST00000494012	IQCF3	P0C7M6	154 aa		11.19	□□□□□ -0.62
MACF1-222	ENST00000494012	ZSCAN22	P10073	491 aa	Predicted RBP	11.19	□□□□□ -0.62
MACF1-222	ENST00000494012	KLRC1	P26715	233 aa		11.19	□□□□□ -0.62
MACF1-222	ENST00000494012	CCL23	P55773	120 aa		11.19	□□□□□ -0.62
MACF1-222	ENST00000494012	CYP4A11	Q02928	519 aa		11.19	□□□□□ -0.62
MACF1-222	ENST00000494012	TBC1D8B	Q0IIM8	1120 aa		11.19	□□□□□ -0.62
MACF1-222	ENST00000494012	PDIA5	Q14554	519 aa		11.19	□□□□□ -0.62
MACF1-222	ENST00000494012	TRIM71	Q2Q1W2	868 aa	Known RBP	11.19	□□□□□ -0.62
MACF1-222	ENST00000494012	PSRC1	Q6PGN9	363 aa	Predicted RBP	11.19	□□□□□ -0.62
MACF1-222	ENST00000494012	MTHFD1L	Q6UB35	978 aa		11.19	□□□□□ -0.62
MACF1-222	ENST00000494012	OTUD6A	Q7L8S5	288 aa		11.19	□□□□□ -0.62
MACF1-222	ENST00000494012	TRMT1L	Q7Z2T5	733 aa	Known RBP	11.19	□□□□□ -0.62
MACF1-222	ENST00000494012	RPAIN	Q86UA6	219 aa		11.19	□□□□□ -0.62
MACF1-222	ENST00000494012	TPH2	Q8IWU9	490 aa		11.19	□□□□□ -0.62
MACF1-222	ENST00000494012	C4orf19	Q8IY42	314 aa		11.19	□□□□□ -0.62
MACF1-222	ENST00000494012	EXOC8	Q8IYI6	725 aa		11.19	□□□□□ -0.62
MACF1-222	ENST00000494012	RPUSD2	Q8IZ73	545 aa	Known RBP	11.19	□□□□□ -0.62
MACF1-222	ENST00000494012	C4orf32	Q8N8J7	132 aa		11.19	□□□□□ -0.62
MACF1-222	ENST00000494012	IGSF22	Q8N9C0	903 aa		11.19	□□□□□ -0.62
MACF1-222	ENST00000494012	TRAPPC12	Q8WVT3	735 aa		11.19	□□□□□ -0.62
MACF1-222	ENST00000494012	DYDC2	Q96IM9	177 aa		11.19	□□□□□ -0.62
MACF1-222	ENST00000494012	CCDC43	Q96MW1	224 aa	Known RBP	11.19	□□□□□ -0.62
MACF1-222	ENST00000494012	HSD17B14	Q9BPX1	270 aa		11.19	□□□□□ -0.62
MACF1-222	ENST00000494012	EIF2AK1	Q9BQI3	630 aa	Known RBP	11.19	□□□□□ -0.62
MACF1-222	ENST00000494012	NIFK	Q9BYG3	293 aa	Known RBP	11.19	□□□□□ -0.62
MACF1-222	ENST00000494012	TUFT1	Q9NNX1	390 aa		11.19	□□□□□ -0.62
MACF1-222	ENST00000494012	IL23A	Q9NPF7	189 aa		11.19	□□□□□ -0.62
MACF1-222	ENST00000494012	RGL1	Q9NZL6	768 aa		11.19	□□□□□ -0.62
MACF1-222	ENST00000494012	LRWD1	Q9UFC0	647 aa		11.19	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms