RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 MYL3P08590 195 aa21.65■■□□□ 1.06
USP39-218ENST00000493829 CPT1AP50416 773 aa21.65■■□□□ 1.06
USP39-218ENST00000493829 MTFR1Q15390 333 aa21.65■■□□□ 1.06
USP39-218ENST00000493829 DGKDQ16760 1214 aa21.65■■□□□ 1.06
USP39-218ENST00000493829 SKOR2Q2VWA4 1001 aaPredicted RBP21.65■■□□□ 1.06
USP39-218ENST00000493829 FBXO46Q6PJ61 603 aaPredicted RBP21.65■■□□□ 1.06
USP39-218ENST00000493829 LARP4BQ92615 738 aaKnown RBP21.65■■□□□ 1.06
USP39-218ENST00000493829 ERCC4Q92889 916 aaPredicted RBP21.65■■□□□ 1.06
USP39-218ENST00000493829 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.65■■□□□ 1.06
USP39-218ENST00000493829 NUP62CLQ9H1M0 184 aa21.65■■□□□ 1.06
USP39-218ENST00000493829 TMEM63CQ9P1W3 806 aa21.65■■□□□ 1.06
USP39-218ENST00000493829 STK17AQ9UEE5 414 aa21.65■■□□□ 1.06
USP39-218ENST00000493829 DNM3Q9UQ16 869 aa21.65■■□□□ 1.06
USP39-218ENST00000493829 Q9Y3F1 56 aa21.65■■□□□ 1.06
USP39-218ENST00000493829 EMSYQ7Z589 1322 aa21.64■■□□□ 1.06
USP39-218ENST00000493829 SLC26A4O43511 780 aa21.64■■□□□ 1.05
USP39-218ENST00000493829 LGR5O75473 907 aa21.64■■□□□ 1.05
USP39-218ENST00000493829 SLFN14P0C7P3 912 aa21.64■■□□□ 1.05
USP39-218ENST00000493829 CASP1P29466 404 aa21.64■■□□□ 1.05
USP39-218ENST00000493829 YWHABP31946 246 aaKnown RBP21.64■■□□□ 1.05
USP39-218ENST00000493829 CCDC43Q96MW1 224 aaKnown RBP21.64■■□□□ 1.05
USP39-218ENST00000493829 BHMT2Q9H2M3 363 aa21.64■■□□□ 1.05
USP39-218ENST00000493829 CLSTN2Q9H4D0 955 aa21.64■■□□□ 1.05
USP39-218ENST00000493829 MAFBQ9Y5Q3 323 aaPredicted RBP21.64■■□□□ 1.05
USP39-218ENST00000493829 MYH9P35579 1960 aaKnown RBP21.64■■□□□ 1.05
USP39-218ENST00000493829 A6NJR5 290 aa21.63■■□□□ 1.05
USP39-218ENST00000493829 CTAGE5O15320 804 aa21.63■■□□□ 1.05
USP39-218ENST00000493829 PRR29P0C7W0 189 aa21.63■■□□□ 1.05
USP39-218ENST00000493829 PLA2G4BP0C869 781 aa21.63■■□□□ 1.05
USP39-218ENST00000493829 ATP4AP20648 1035 aa21.63■■□□□ 1.05
USP39-218ENST00000493829 GJA9P57773 515 aa21.63■■□□□ 1.05
USP39-218ENST00000493829 AFAP1L1Q8TED9 768 aa21.63■■□□□ 1.05
USP39-218ENST00000493829 NACC1Q96RE7 527 aa21.63■■□□□ 1.05
USP39-218ENST00000493829 SPC25Q9HBM1 224 aa21.63■■□□□ 1.05
USP39-218ENST00000493829 BMP2KQ9NSY1 1161 aaPredicted RBP21.63■■□□□ 1.05
USP39-218ENST00000493829 ARID2Q68CP9 1835 aa21.63■■□□□ 1.05
USP39-218ENST00000493829 OATP04181 439 aa21.63■■□□□ 1.05
USP39-218ENST00000493829 BRDTQ58F21 947 aaPredicted RBP21.63■■□□□ 1.05
USP39-218ENST00000493829 C4orf19Q8IY42 314 aa21.63■■□□□ 1.05
USP39-218ENST00000493829 PPP1R13LQ8WUF5 828 aa21.63■■□□□ 1.05
USP39-218ENST00000493829 PAGE5Q96GU1 130 aa21.63■■□□□ 1.05
USP39-218ENST00000493829 UPF3AQ9H1J1 476 aaKnown RBP21.63■■□□□ 1.05
USP39-218ENST00000493829 BLZF1Q9H2G9 400 aa21.63■■□□□ 1.05
USP39-218ENST00000493829 SMARCAD1Q9H4L7 1026 aa21.63■■□□□ 1.05
USP39-218ENST00000493829 ADAMTS4O75173 837 aa21.62■■□□□ 1.05
USP39-218ENST00000493829 PPFIA4O75335 1185 aa21.62■■□□□ 1.05
USP39-218ENST00000493829 CCL5P13501 91 aa21.62■■□□□ 1.05
USP39-218ENST00000493829 PNOCQ13519 176 aa21.62■■□□□ 1.05
USP39-218ENST00000493829 GNASQ5JWF2 1037 aa21.62■■□□□ 1.05
USP39-218ENST00000493829 ANO5Q75V66 913 aa21.62■■□□□ 1.05
USP39-218ENST00000493829 MTRQ99707 1265 aa21.62■■□□□ 1.05
USP39-218ENST00000493829 TNMDQ9H2S6 317 aa21.62■■□□□ 1.05
USP39-218ENST00000493829 CUEDC2Q9H467 287 aa21.62■■□□□ 1.05
USP39-218ENST00000493829 USP25Q9UHP3 1055 aa21.62■■□□□ 1.05
USP39-218ENST00000493829 TRPC6Q9Y210 931 aa21.62■■□□□ 1.05
USP39-218ENST00000493829 ARHGEF35A5YM69 484 aa21.61■■□□□ 1.05
USP39-218ENST00000493829 DKC1O60832 514 aaKnown RBP eCLIP21.61■■□□□ 1.05
USP39-218ENST00000493829 LYPLA2O95372 231 aa21.61■■□□□ 1.05
USP39-218ENST00000493829 EYA4O95677 639 aa21.61■■□□□ 1.05
USP39-218ENST00000493829 HOXD8P13378 290 aaPredicted RBP21.61■■□□□ 1.05
USP39-218ENST00000493829 MUTP22033 750 aa21.61■■□□□ 1.05
USP39-218ENST00000493829 NPEPPSP55786 919 aa21.61■■□□□ 1.05
USP39-218ENST00000493829 CCDC183Q5T5S1 534 aa21.61■■□□□ 1.05
USP39-218ENST00000493829 SV2BQ7L1I2 683 aa21.61■■□□□ 1.05
USP39-218ENST00000493829 TIGD1Q96MW7 591 aa21.61■■□□□ 1.05
USP39-218ENST00000493829 C16orf70Q9BSU1 422 aa21.61■■□□□ 1.05
USP39-218ENST00000493829 RNF208Q9H0X6 261 aa21.61■■□□□ 1.05
USP39-218ENST00000493829 GZF1Q9H116 711 aaPredicted RBP21.61■■□□□ 1.05
USP39-218ENST00000493829 ERAP1Q9NZ08 941 aa21.61■■□□□ 1.05
USP39-218ENST00000493829 ZNF215Q9UL58 517 aaPredicted RBP21.61■■□□□ 1.05
USP39-218ENST00000493829 STBD1O95210 358 aa21.6■■□□□ 1.05
USP39-218ENST00000493829 SLC12A3P55017 1021 aa21.6■■□□□ 1.05
USP39-218ENST00000493829 RAD51AP2Q09MP3 1159 aa21.6■■□□□ 1.05
USP39-218ENST00000493829 POSTNQ15063 836 aa21.6■■□□□ 1.05
USP39-218ENST00000493829 PLCB4Q15147 1175 aa21.6■■□□□ 1.05
USP39-218ENST00000493829 MTERF2Q49AM1 385 aa21.6■■□□□ 1.05
USP39-218ENST00000493829 XKR9Q5GH70 373 aa21.6■■□□□ 1.05
USP39-218ENST00000493829 PLPPR4Q7Z2D5 763 aa21.6■■□□□ 1.05
USP39-218ENST00000493829 GPBP1Q86WP2 473 aa21.6■■□□□ 1.05
USP39-218ENST00000493829 SYAP1Q96A49 352 aaPredicted RBP21.6■■□□□ 1.05
USP39-218ENST00000493829 LOXHD1Q8IVV2 1947 aa21.6■■□□□ 1.05
USP39-218ENST00000493829 NPHP3-ACAD11A0A0J9YXS1 232 aa21.6■■□□□ 1.05
USP39-218ENST00000493829 MSCO60682 206 aa21.6■■□□□ 1.05
USP39-218ENST00000493829 CACNB1Q02641 598 aaPredicted RBP21.6■■□□□ 1.05
USP39-218ENST00000493829 PKN2Q16513 984 aaKnown RBP21.6■■□□□ 1.05
USP39-218ENST00000493829 XKR3Q5GH77 459 aa21.6■■□□□ 1.05
USP39-218ENST00000493829 LHX8Q68G74 356 aa21.6■■□□□ 1.05
USP39-218ENST00000493829 CEP170P1Q96L14 293 aa21.6■■□□□ 1.05
USP39-218ENST00000493829 DEFB118Q96PH6 123 aa21.6■■□□□ 1.05
USP39-218ENST00000493829 RUSC1Q9BVN2 902 aa21.6■■□□□ 1.05
USP39-218ENST00000493829 RNPEPQ9H4A4 650 aa21.6■■□□□ 1.05
USP39-218ENST00000493829 KBTBD4Q9NVX7 518 aa21.6■■□□□ 1.05
USP39-218ENST00000493829 H3BRB1 525 aa21.59■■□□□ 1.05
USP39-218ENST00000493829 USO1O60763 962 aaKnown RBP21.59■■□□□ 1.05
USP39-218ENST00000493829 RARRES1P49788 294 aa21.59■■□□□ 1.05
USP39-218ENST00000493829 CUL4BQ13620 913 aa21.59■■□□□ 1.05
USP39-218ENST00000493829 CXCL17Q6UXB2 119 aa21.59■■□□□ 1.05
USP39-218ENST00000493829 DYMQ7RTS9 669 aa21.59■■□□□ 1.05
USP39-218ENST00000493829 TUT1Q9H6E5 874 aaKnown RBP21.59■■□□□ 1.05
USP39-218ENST00000493829 MAGEF1Q9HAY2 307 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms