RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 ANGPT1Q15389 498 aa8.42□□□□□ -1.06
BRCA1-221ENST00000493795 RBBP7Q16576 425 aa8.42□□□□□ -1.06
BRCA1-221ENST00000493795 KLHL38Q2WGJ6 581 aa8.42□□□□□ -1.06
BRCA1-221ENST00000493795 THAP11Q96EK4 314 aa8.42□□□□□ -1.06
BRCA1-221ENST00000493795 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.42□□□□□ -1.06
BRCA1-221ENST00000493795 MAGEB5Q9BZ81 275 aa8.42□□□□□ -1.06
BRCA1-221ENST00000493795 LCMT1Q9UIC8 334 aa8.42□□□□□ -1.06
BRCA1-221ENST00000493795 EFCAB5A4FU69 1503 aa8.42□□□□□ -1.06
BRCA1-221ENST00000493795 SUPT6HQ7KZ85 1726 aaKnown RBP8.42□□□□□ -1.06
BRCA1-221ENST00000493795 C16orf96A6NNT2 1141 aa8.42□□□□□ -1.06
BRCA1-221ENST00000493795 CAPZA2P47755 286 aa8.42□□□□□ -1.06
BRCA1-221ENST00000493795 RBL2Q08999 1139 aa8.42□□□□□ -1.06
BRCA1-221ENST00000493795 ZNF827Q17R98 1081 aa8.42□□□□□ -1.06
BRCA1-221ENST00000493795 FLCNQ8NFG4 579 aa8.42□□□□□ -1.06
BRCA1-221ENST00000493795 RBM46Q8TBY0 533 aaKnown RBP8.42□□□□□ -1.06
BRCA1-221ENST00000493795 LARP4BQ92615 738 aaKnown RBP8.42□□□□□ -1.06
BRCA1-221ENST00000493795 GINS4Q9BRT9 223 aa8.42□□□□□ -1.06
BRCA1-221ENST00000493795 SLC7A5P2Q9GIP4 190 aa8.42□□□□□ -1.06
BRCA1-221ENST00000493795 TBC1D23Q9NUY8 699 aa8.42□□□□□ -1.06
BRCA1-221ENST00000493795 PRKAG2Q9UGJ0 569 aa8.42□□□□□ -1.06
BRCA1-221ENST00000493795 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.42□□□□□ -1.06
BRCA1-221ENST00000493795 HNRNPRO43390 633 aaKnown RBP8.41□□□□□ -1.06
BRCA1-221ENST00000493795 FTCDO95954 541 aa8.41□□□□□ -1.06
BRCA1-221ENST00000493795 CDH2P19022 906 aaPredicted RBP8.41□□□□□ -1.06
BRCA1-221ENST00000493795 ARHGEF6Q15052 776 aa8.41□□□□□ -1.06
BRCA1-221ENST00000493795 SURF1Q15526 300 aa8.41□□□□□ -1.06
BRCA1-221ENST00000493795 MAN2A1Q16706 1144 aa8.41□□□□□ -1.06
BRCA1-221ENST00000493795 CCDC142Q17RM4 750 aa8.41□□□□□ -1.06
BRCA1-221ENST00000493795 LRRC8EQ6NSJ5 796 aa8.41□□□□□ -1.06
BRCA1-221ENST00000493795 C7orf31Q8N865 590 aa8.41□□□□□ -1.06
BRCA1-221ENST00000493795 ARMC2Q8NEN0 867 aa8.41□□□□□ -1.06
BRCA1-221ENST00000493795 SAYSD1Q9NPB0 183 aa8.41□□□□□ -1.06
BRCA1-221ENST00000493795 KIF1CO43896 1103 aaKnown RBP8.41□□□□□ -1.06
BRCA1-221ENST00000493795 SUPT3HO75486 399 aa8.41□□□□□ -1.06
BRCA1-221ENST00000493795 TJP3O95049 919 aa8.41□□□□□ -1.06
BRCA1-221ENST00000493795 ELF1P32519 619 aa8.41□□□□□ -1.06
BRCA1-221ENST00000493795 RUNX1T1Q06455 604 aa8.41□□□□□ -1.06
BRCA1-221ENST00000493795 EAPPQ56P03 285 aaPredicted RBP8.41□□□□□ -1.06
BRCA1-221ENST00000493795 RWDD4Q6NW29 188 aaKnown RBP8.41□□□□□ -1.06
BRCA1-221ENST00000493795 TADA2BQ86TJ2 420 aa8.41□□□□□ -1.06
BRCA1-221ENST00000493795 SLC7A3Q8WY07 619 aa8.41□□□□□ -1.06
BRCA1-221ENST00000493795 HSPH1Q92598 858 aa8.41□□□□□ -1.06
BRCA1-221ENST00000493795 FSD1LQ9BXM9 530 aa8.41□□□□□ -1.06
BRCA1-221ENST00000493795 AP5M1Q9H0R1 490 aa8.41□□□□□ -1.06
BRCA1-221ENST00000493795 ADNPQ9H2P0 1102 aa8.41□□□□□ -1.06
BRCA1-221ENST00000493795 PCDHGB4Q9UN71 923 aa8.41□□□□□ -1.06
BRCA1-221ENST00000493795 PRPF4O43172 522 aaKnown RBP eCLIP8.41□□□□□ -1.065e-17■■■■■ 29.7
BRCA1-221ENST00000493795 ADCY3O60266 1144 aa8.41□□□□□ -1.06
BRCA1-221ENST00000493795 SERPING1P05155 500 aa8.41□□□□□ -1.06
BRCA1-221ENST00000493795 KITP10721 976 aa8.41□□□□□ -1.06
BRCA1-221ENST00000493795 HORMAD1Q86X24 394 aa8.41□□□□□ -1.06
BRCA1-221ENST00000493795 KCNV2Q8TDN2 545 aa8.41□□□□□ -1.06
BRCA1-221ENST00000493795 GCOM2Q9BZD3 368 aaPredicted RBP8.41□□□□□ -1.06
BRCA1-221ENST00000493795 KIAA1024Q9UPX6 916 aa8.41□□□□□ -1.06
BRCA1-221ENST00000493795 PODXLO00592 558 aa8.41□□□□□ -1.06
BRCA1-221ENST00000493795 RNMTO43148 476 aaKnown RBP8.41□□□□□ -1.06
BRCA1-221ENST00000493795 TOMM70O94826 608 aa8.41□□□□□ -1.06
BRCA1-221ENST00000493795 ACSL3O95573 720 aa8.41□□□□□ -1.06
BRCA1-221ENST00000493795 GUCA1CO95843 209 aa8.41□□□□□ -1.06
BRCA1-221ENST00000493795 BRD2P25440 801 aaKnown RBP8.41□□□□□ -1.06
BRCA1-221ENST00000493795 TBL3Q12788 808 aaKnown RBP8.41□□□□□ -1.06
BRCA1-221ENST00000493795 INPP5AQ14642 412 aa8.41□□□□□ -1.06
BRCA1-221ENST00000493795 EPM2AIP1Q7L775 607 aaPredicted RBP8.41□□□□□ -1.06
BRCA1-221ENST00000493795 NLRP9Q7RTR0 991 aa8.41□□□□□ -1.06
BRCA1-221ENST00000493795 SH3KBP1Q96B97 665 aa8.41□□□□□ -1.06
BRCA1-221ENST00000493795 HEXIM2Q96MH2 286 aaKnown RBP8.41□□□□□ -1.06
BRCA1-221ENST00000493795 FAM161BQ96MY7 647 aa8.41□□□□□ -1.06
BRCA1-221ENST00000493795 PAPOLBQ9NRJ5 636 aaKnown RBP8.41□□□□□ -1.06
BRCA1-221ENST00000493795 MAP3K15Q6ZN16 1313 aa8.41□□□□□ -1.06
BRCA1-221ENST00000493795 ADGRF5Q8IZF2 1346 aa8.41□□□□□ -1.06
BRCA1-221ENST00000493795 E5RI56 91 aa8.4□□□□□ -1.06
BRCA1-221ENST00000493795 M0R2C6 588 aa8.4□□□□□ -1.06
BRCA1-221ENST00000493795 GSPT1P15170 499 aaKnown RBP8.4□□□□□ -1.06
BRCA1-221ENST00000493795 TMED10P49755 219 aaKnown RBP8.4□□□□□ -1.06
BRCA1-221ENST00000493795 GUCY1A3Q02108 690 aa8.4□□□□□ -1.06
BRCA1-221ENST00000493795 EIF4A2Q14240 407 aaKnown RBP8.4□□□□□ -1.06
BRCA1-221ENST00000493795 FASTKD5Q7L8L6 764 aaKnown RBP8.4□□□□□ -1.06
BRCA1-221ENST00000493795 FAM133AQ8N9E0 248 aa8.4□□□□□ -1.06
BRCA1-221ENST00000493795 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.4□□□□□ -1.06
BRCA1-221ENST00000493795 DDX17Q92841 729 aaKnown RBP8.4□□□□□ -1.06
BRCA1-221ENST00000493795 P2RX5Q93086 422 aa8.4□□□□□ -1.06
BRCA1-221ENST00000493795 KLHL31Q9H511 634 aa8.4□□□□□ -1.06
BRCA1-221ENST00000493795 UBE2TQ9NPD8 197 aaPredicted RBP8.4□□□□□ -1.06
BRCA1-221ENST00000493795 PLAAQ9Y263 795 aa8.4□□□□□ -1.06
BRCA1-221ENST00000493795 INO80B-WBP1J3KQ70 363 aa8.4□□□□□ -1.06
BRCA1-221ENST00000493795 LRRN2O75325 713 aa8.4□□□□□ -1.06
BRCA1-221ENST00000493795 TAF5LO75529 589 aa8.4□□□□□ -1.06
BRCA1-221ENST00000493795 GFPT2O94808 682 aa8.4□□□□□ -1.06
BRCA1-221ENST00000493795 SMARCA1P28370 1054 aa8.4□□□□□ -1.06
BRCA1-221ENST00000493795 NUP62P37198 522 aaPredicted RBP8.4□□□□□ -1.06
BRCA1-221ENST00000493795 TFAMQ00059 246 aaKnown RBP8.4□□□□□ -1.06
BRCA1-221ENST00000493795 ARHGEF25Q86VW2 580 aa8.4□□□□□ -1.06
BRCA1-221ENST00000493795 RASSF3Q86WH2 238 aa8.4□□□□□ -1.06
BRCA1-221ENST00000493795 TRIM69Q86WT6 500 aa8.4□□□□□ -1.06
BRCA1-221ENST00000493795 PBXIP1Q96AQ6 731 aa8.4□□□□□ -1.06
BRCA1-221ENST00000493795 EGFL8Q99944 293 aa8.4□□□□□ -1.06
BRCA1-221ENST00000493795 INO80BQ9C086 356 aaPredicted RBP8.4□□□□□ -1.06
BRCA1-221ENST00000493795 LSG1Q9H089 658 aaKnown RBP8.4□□□□□ -1.06
BRCA1-221ENST00000493795 GRIN2BQ13224 1484 aa8.4□□□□□ -1.06
BRCA1-221ENST00000493795 COBLO75128 1261 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms