RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 GAS7O60861 476 aa10.58□□□□□ -0.72
NPHP3-209ENST00000493732 SRGAP2O75044 1071 aa10.58□□□□□ -0.72
NPHP3-209ENST00000493732 GCNT3O95395 438 aa10.58□□□□□ -0.72
NPHP3-209ENST00000493732 NR3C1P04150 777 aa10.58□□□□□ -0.72
NPHP3-209ENST00000493732 CCDC172P0C7W6 258 aa10.58□□□□□ -0.72
NPHP3-209ENST00000493732 CHRNA5P30532 468 aa10.58□□□□□ -0.72
NPHP3-209ENST00000493732 HOXA13P31271 388 aaPredicted RBP10.58□□□□□ -0.72
NPHP3-209ENST00000493732 PSMC2P35998 433 aaKnown RBP10.58□□□□□ -0.72
NPHP3-209ENST00000493732 PSMC6P62333 389 aa10.58□□□□□ -0.72
NPHP3-209ENST00000493732 RASSF7Q02833 373 aa10.58□□□□□ -0.72
NPHP3-209ENST00000493732 RAD51AP2Q09MP3 1159 aa10.58□□□□□ -0.72
NPHP3-209ENST00000493732 MYBPC2Q14324 1141 aa10.58□□□□□ -0.72
NPHP3-209ENST00000493732 TNIP1Q15025 636 aa10.58□□□□□ -0.72
NPHP3-209ENST00000493732 EPHA7Q15375 998 aa10.58□□□□□ -0.72
NPHP3-209ENST00000493732 SPDYE2Q495Y8 402 aa10.58□□□□□ -0.72
NPHP3-209ENST00000493732 CEP55Q53EZ4 464 aa10.58□□□□□ -0.72
NPHP3-209ENST00000493732 RINT1Q6NUQ1 792 aa10.58□□□□□ -0.72
NPHP3-209ENST00000493732 HS2ST1Q7LGA3 356 aa10.58□□□□□ -0.72
NPHP3-209ENST00000493732 GOLGA6L1Q8N7Z2 621 aa10.58□□□□□ -0.72
NPHP3-209ENST00000493732 TTLL6Q8N841 843 aa10.58□□□□□ -0.72
NPHP3-209ENST00000493732 AGBL3Q8NEM8 1001 aa10.58□□□□□ -0.72
NPHP3-209ENST00000493732 LMBR1Q8WVP7 490 aa10.58□□□□□ -0.72
NPHP3-209ENST00000493732 P2RX7Q99572 595 aaKnown RBP10.58□□□□□ -0.72
NPHP3-209ENST00000493732 GANQ9H2C0 597 aa10.58□□□□□ -0.72
NPHP3-209ENST00000493732 PARVGQ9HBI0 331 aa10.58□□□□□ -0.72
NPHP3-209ENST00000493732 GINM1Q9NU53 330 aa10.58□□□□□ -0.72
NPHP3-209ENST00000493732 MAP3K20Q9NYL2 800 aaKnown RBP10.58□□□□□ -0.72
NPHP3-209ENST00000493732 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.58□□□□□ -0.72
NPHP3-209ENST00000493732 ZNF219Q9P2Y4 722 aaPredicted RBP10.58□□□□□ -0.72
NPHP3-209ENST00000493732 TFR2Q9UP52 801 aa10.58□□□□□ -0.72
NPHP3-209ENST00000493732 PCDHB13Q9Y5F0 798 aa10.58□□□□□ -0.72
NPHP3-209ENST00000493732 CAPN6Q9Y6Q1 641 aa10.58□□□□□ -0.72
NPHP3-209ENST00000493732 PSME4Q14997 1843 aa10.58□□□□□ -0.72
NPHP3-209ENST00000493732 SHTN1A0MZ66 631 aa10.58□□□□□ -0.72
NPHP3-209ENST00000493732 YDJCA8MPS7 323 aa10.58□□□□□ -0.72
NPHP3-209ENST00000493732 TCP10L2B9ZVM9 353 aa10.58□□□□□ -0.72
NPHP3-209ENST00000493732 FLOT1O75955 427 aa10.58□□□□□ -0.72
NPHP3-209ENST00000493732 CLSTN1O94985 981 aa10.58□□□□□ -0.72
NPHP3-209ENST00000493732 ASNSP08243 561 aa10.58□□□□□ -0.72
NPHP3-209ENST00000493732 SLURP2P0DP57 97 aa10.58□□□□□ -0.72
NPHP3-209ENST00000493732 BCRP11274 1271 aa10.58□□□□□ -0.72
NPHP3-209ENST00000493732 UCHL3P15374 230 aa10.58□□□□□ -0.72
NPHP3-209ENST00000493732 PRKCIP41743 596 aa10.58□□□□□ -0.72
NPHP3-209ENST00000493732 AARSP49588 968 aaKnown RBP eCLIP10.58□□□□□ -0.72
NPHP3-209ENST00000493732 ALCAMQ13740 583 aa10.58□□□□□ -0.72
NPHP3-209ENST00000493732 SHROOM1Q2M3G4 852 aaPredicted RBP10.58□□□□□ -0.72
NPHP3-209ENST00000493732 KLHDC7AQ5VTJ3 777 aa10.58□□□□□ -0.72
NPHP3-209ENST00000493732 CCNI2Q6ZMN8 369 aaPredicted RBP10.58□□□□□ -0.72
NPHP3-209ENST00000493732 NIPA1Q7RTP0 329 aa10.58□□□□□ -0.72
NPHP3-209ENST00000493732 MCF2L2Q86YR7 1114 aa10.58□□□□□ -0.72
NPHP3-209ENST00000493732 SPATA4Q8NEY3 305 aa10.58□□□□□ -0.72
NPHP3-209ENST00000493732 COG1Q8WTW3 980 aa10.58□□□□□ -0.72
NPHP3-209ENST00000493732 TBC1D5Q92609 795 aa10.58□□□□□ -0.72
NPHP3-209ENST00000493732 VTI1AQ96AJ9 217 aa10.58□□□□□ -0.72
NPHP3-209ENST00000493732 CRACR2AQ9BSW2 395 aa10.58□□□□□ -0.72
NPHP3-209ENST00000493732 TEKT3Q9BXF9 490 aa10.58□□□□□ -0.72
NPHP3-209ENST00000493732 FGFBP2Q9BYJ0 223 aa10.58□□□□□ -0.72
NPHP3-209ENST00000493732 MLXIPQ9HAP2 919 aa10.58□□□□□ -0.72
NPHP3-209ENST00000493732 PDE11AQ9HCR9 933 aa10.58□□□□□ -0.72
NPHP3-209ENST00000493732 ST7Q9NRC1 585 aa10.58□□□□□ -0.72
NPHP3-209ENST00000493732 CALCOCO1Q9P1Z2 691 aa10.58□□□□□ -0.72
NPHP3-209ENST00000493732 INTUQ9ULD6 942 aa10.58□□□□□ -0.72
NPHP3-209ENST00000493732 PCDHGC5Q9Y5F6 944 aa10.58□□□□□ -0.72
NPHP3-209ENST00000493732 TLR2O60603 784 aa10.57□□□□□ -0.72
NPHP3-209ENST00000493732 SLITRK3O94933 977 aa10.57□□□□□ -0.72
NPHP3-209ENST00000493732 FERP16591 822 aa10.57□□□□□ -0.72
NPHP3-209ENST00000493732 ZNF131P52739 623 aa10.57□□□□□ -0.72
NPHP3-209ENST00000493732 SNAP25P60880 206 aa10.57□□□□□ -0.72
NPHP3-209ENST00000493732 CYP4A11Q02928 519 aa10.57□□□□□ -0.72
NPHP3-209ENST00000493732 KIAA0753Q2KHM9 967 aa10.57□□□□□ -0.72
NPHP3-209ENST00000493732 C1orf186Q6ZWK4 172 aa10.57□□□□□ -0.72
NPHP3-209ENST00000493732 TPH2Q8IWU9 490 aa10.57□□□□□ -0.72
NPHP3-209ENST00000493732 SPICE1Q8N0Z3 855 aa10.57□□□□□ -0.72
NPHP3-209ENST00000493732 MYCT1Q8N699 235 aa10.57□□□□□ -0.72
NPHP3-209ENST00000493732 CCDC102AQ96A19 550 aa10.57□□□□□ -0.72
NPHP3-209ENST00000493732 GMLQ99445 158 aa10.57□□□□□ -0.72
NPHP3-209ENST00000493732 ZNF577Q9BSK1 485 aa10.57□□□□□ -0.72
NPHP3-209ENST00000493732 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.57□□□□□ -0.72
NPHP3-209ENST00000493732 ADAM21Q9UKJ8 722 aa10.57□□□□□ -0.72
NPHP3-209ENST00000493732 FRMPD4Q14CM0 1322 aa10.57□□□□□ -0.72
NPHP3-209ENST00000493732 PRPF6O94906 941 aaKnown RBP10.56□□□□□ -0.72
NPHP3-209ENST00000493732 TFRCP02786 760 aaKnown RBP10.56□□□□□ -0.72
NPHP3-209ENST00000493732 MYBP10242 640 aa10.56□□□□□ -0.72
NPHP3-209ENST00000493732 MAPTP10636 758 aaKnown RBP10.56□□□□□ -0.72
NPHP3-209ENST00000493732 RFX1P22670 979 aa10.56□□□□□ -0.72
NPHP3-209ENST00000493732 GUCY2CP25092 1073 aa10.56□□□□□ -0.72
NPHP3-209ENST00000493732 PON1P27169 355 aa10.56□□□□□ -0.72
NPHP3-209ENST00000493732 RXRBP28702 533 aa10.56□□□□□ -0.72
NPHP3-209ENST00000493732 TNFRSF8P28908 595 aa10.56□□□□□ -0.72
NPHP3-209ENST00000493732 CAP2P40123 477 aa10.56□□□□□ -0.72
NPHP3-209ENST00000493732 ECE1P42892 770 aa10.56□□□□□ -0.72
NPHP3-209ENST00000493732 TNNT3P45378 269 aaPredicted RBP10.56□□□□□ -0.72
NPHP3-209ENST00000493732 CASP5P51878 434 aa10.56□□□□□ -0.72
NPHP3-209ENST00000493732 JAG1P78504 1218 aa10.56□□□□□ -0.72
NPHP3-209ENST00000493732 PPP2R5AQ15172 486 aa10.56□□□□□ -0.72
NPHP3-209ENST00000493732 EMBQ6PCB8 327 aa10.56□□□□□ -0.72
NPHP3-209ENST00000493732 LARGE2Q8N3Y3 721 aa10.56□□□□□ -0.72
NPHP3-209ENST00000493732 FAM133AQ8N9E0 248 aa10.56□□□□□ -0.72
NPHP3-209ENST00000493732 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.56□□□□□ -0.72
NPHP3-209ENST00000493732 TAF4BQ92750 862 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms