RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 PTRH1Q86Y79 214 aaKnown RBP6.74□□□□□ -1.33
SMC4-223ENST00000493695 SH3RF2Q8TEC5 729 aa6.74□□□□□ -1.33
SMC4-223ENST00000493695 CHFRQ96EP1 664 aa6.74□□□□□ -1.33
SMC4-223ENST00000493695 TRIM8Q9BZR9 551 aa6.74□□□□□ -1.33
SMC4-223ENST00000493695 ASXL2Q76L83 1435 aa6.74□□□□□ -1.33
SMC4-223ENST00000493695 TCRBV5S4A2TA0A5A2 114 aa6.73□□□□□ -1.33
SMC4-223ENST00000493695 FAM90A27PA6NNH2 459 aa6.73□□□□□ -1.33
SMC4-223ENST00000493695 KCNK3O14649 394 aa6.73□□□□□ -1.33
SMC4-223ENST00000493695 ARHGAP6O43182 974 aa6.73□□□□□ -1.33
SMC4-223ENST00000493695 C1SP09871 688 aa6.73□□□□□ -1.33
SMC4-223ENST00000493695 PTGS1P23219 599 aa6.73□□□□□ -1.33
SMC4-223ENST00000493695 MSX2P35548 267 aaPredicted RBP6.73□□□□□ -1.33
SMC4-223ENST00000493695 ETV4P43268 484 aa6.73□□□□□ -1.33
SMC4-223ENST00000493695 GPR19Q15760 415 aa6.73□□□□□ -1.33
SMC4-223ENST00000493695 SGMS1Q86VZ5 419 aa6.73□□□□□ -1.33
SMC4-223ENST00000493695 OSTM1Q86WC4 334 aa6.73□□□□□ -1.33
SMC4-223ENST00000493695 RTKN2Q8IZC4 609 aa6.73□□□□□ -1.33
SMC4-223ENST00000493695 ZNF808Q8N4W9 903 aaPredicted RBP6.73□□□□□ -1.33
SMC4-223ENST00000493695 INCENPQ9NQS7 918 aa6.73□□□□□ -1.33
SMC4-223ENST00000493695 SRPK3Q9UPE1 567 aa6.73□□□□□ -1.33
SMC4-223ENST00000493695 PCDHA8Q9Y5H6 950 aa6.73□□□□□ -1.33
SMC4-223ENST00000493695 PYGMP11217 842 aa6.72□□□□□ -1.33
SMC4-223ENST00000493695 TCF3P15923 654 aa6.72□□□□□ -1.33
SMC4-223ENST00000493695 PDE6AP16499 860 aa6.72□□□□□ -1.33
SMC4-223ENST00000493695 RPS19P39019 145 aaKnown RBP6.72□□□□□ -1.33
SMC4-223ENST00000493695 USP30Q70CQ3 517 aa6.72□□□□□ -1.33
SMC4-223ENST00000493695 FILIP1Q7Z7B0 1213 aa6.72□□□□□ -1.33
SMC4-223ENST00000493695 FBXW5Q969U6 566 aa6.72□□□□□ -1.33
SMC4-223ENST00000493695 TMEM176AQ96HP8 235 aa6.72□□□□□ -1.33
SMC4-223ENST00000493695 PDGFDQ9GZP0 370 aaPredicted RBP6.72□□□□□ -1.33
SMC4-223ENST00000493695 TLR9Q9NR96 1032 aa6.72□□□□□ -1.33
SMC4-223ENST00000493695 PPP1R1BQ9UD71 204 aaPredicted RBP6.72□□□□□ -1.33
SMC4-223ENST00000493695 REXO2Q9Y3B8 237 aaKnown RBP6.72□□□□□ -1.33
SMC4-223ENST00000493695 CCDC85CA6NKD9 419 aa6.71□□□□□ -1.34
SMC4-223ENST00000493695 AQP7O14520 342 aa6.71□□□□□ -1.34
SMC4-223ENST00000493695 NARSO43776 548 aaKnown RBP6.71□□□□□ -1.34
SMC4-223ENST00000493695 DNM2P50570 870 aa6.71□□□□□ -1.34
SMC4-223ENST00000493695 IL13RA1P78552 427 aa6.71□□□□□ -1.34
SMC4-223ENST00000493695 GUCY1A3Q02108 690 aa6.71□□□□□ -1.34
SMC4-223ENST00000493695 CRY1Q16526 586 aa6.71□□□□□ -1.34
SMC4-223ENST00000493695 TBR1Q16650 682 aa6.71□□□□□ -1.34
SMC4-223ENST00000493695 Q6ZSN1 163 aa6.71□□□□□ -1.34
SMC4-223ENST00000493695 ST13P5Q8NFI4 369 aaPredicted RBP6.71□□□□□ -1.34
SMC4-223ENST00000493695 OR14K1Q8NGZ2 314 aa6.71□□□□□ -1.34
SMC4-223ENST00000493695 CEP89Q96ST8 783 aa6.71□□□□□ -1.34
SMC4-223ENST00000493695 ZDHHC5Q9C0B5 715 aa6.71□□□□□ -1.34
SMC4-223ENST00000493695 UCKL1Q9NWZ5 548 aa6.71□□□□□ -1.34
SMC4-223ENST00000493695 GALNT8Q9NY28 637 aa6.71□□□□□ -1.34
SMC4-223ENST00000493695 FBXO10Q9UK96 956 aa6.71□□□□□ -1.34
SMC4-223ENST00000493695 SLC30A1Q9Y6M5 507 aa6.71□□□□□ -1.34
SMC4-223ENST00000493695 U2SURPO15042 1029 aaKnown RBP6.7□□□□□ -1.34
SMC4-223ENST00000493695 PLSCR1O15162 318 aa6.7□□□□□ -1.34
SMC4-223ENST00000493695 MC4RP32245 332 aa6.7□□□□□ -1.34
SMC4-223ENST00000493695 SMN1Q16637 294 aaKnown RBP6.7□□□□□ -1.34
SMC4-223ENST00000493695 LARP4Q71RC2 724 aaKnown RBP eCLIP6.7□□□□□ -1.341e-17■□□□□ 10.1
SMC4-223ENST00000493695 TINF2Q9BSI4 451 aa6.7□□□□□ -1.34
SMC4-223ENST00000493695 IKZF4Q9H2S9 585 aa6.7□□□□□ -1.34
SMC4-223ENST00000493695 MAN2B1O00754 1011 aa6.69□□□□□ -1.34
SMC4-223ENST00000493695 GSTA4O15217 222 aa6.69□□□□□ -1.34
SMC4-223ENST00000493695 APPP05067 770 aa6.69□□□□□ -1.34
SMC4-223ENST00000493695 ADH4P08319 380 aa6.69□□□□□ -1.34
SMC4-223ENST00000493695 ACRV1P26436 265 aa6.69□□□□□ -1.34
SMC4-223ENST00000493695 GJA4P35212 333 aa6.69□□□□□ -1.34
SMC4-223ENST00000493695 MRE11P49959 708 aa6.69□□□□□ -1.34
SMC4-223ENST00000493695 JAM2P57087 298 aa6.69□□□□□ -1.34
SMC4-223ENST00000493695 INHBEP58166 350 aa6.69□□□□□ -1.34
SMC4-223ENST00000493695 FOXL1Q12952 345 aa6.69□□□□□ -1.34
SMC4-223ENST00000493695 GRM7Q14831 915 aa6.69□□□□□ -1.34
SMC4-223ENST00000493695 PCOLCEQ15113 449 aa6.69□□□□□ -1.34
SMC4-223ENST00000493695 ZC3H7AQ8IWR0 971 aaKnown RBP6.69□□□□□ -1.34
SMC4-223ENST00000493695 IL17DQ8TAD2 202 aa6.69□□□□□ -1.34
SMC4-223ENST00000493695 SPATA9Q9BWV2 254 aa6.69□□□□□ -1.34
SMC4-223ENST00000493695 PLA2G3Q9NZ20 509 aa6.69□□□□□ -1.34
SMC4-223ENST00000493695 PFDN2Q9UHV9 154 aa6.69□□□□□ -1.34
SMC4-223ENST00000493695 CAPN14A8MX76 684 aa6.68□□□□□ -1.34
SMC4-223ENST00000493695 MATN2O00339 956 aa6.68□□□□□ -1.34
SMC4-223ENST00000493695 CD83Q01151 205 aa6.68□□□□□ -1.34
SMC4-223ENST00000493695 CRHR2Q13324 411 aa6.68□□□□□ -1.34
SMC4-223ENST00000493695 TUBA3CQ13748 450 aa6.68□□□□□ -1.34
SMC4-223ENST00000493695 FAM47CQ5HY64 1035 aa6.68□□□□□ -1.34
SMC4-223ENST00000493695 FIGNQ5HY92 759 aa6.68□□□□□ -1.34
SMC4-223ENST00000493695 TUBA3EQ6PEY2 450 aa6.68□□□□□ -1.34
SMC4-223ENST00000493695 MAMDC4Q6UXC1 1216 aa6.68□□□□□ -1.34
SMC4-223ENST00000493695 MAMDC2Q7Z304 686 aaPredicted RBP6.68□□□□□ -1.34
SMC4-223ENST00000493695 SCUBE1Q8IWY4 988 aa6.68□□□□□ -1.34
SMC4-223ENST00000493695 D2HGDHQ8N465 521 aa6.68□□□□□ -1.34
SMC4-223ENST00000493695 PTPRN2Q92932 1015 aa6.68□□□□□ -1.34
SMC4-223ENST00000493695 MMRN2Q9H8L6 949 aa6.68□□□□□ -1.34
SMC4-223ENST00000493695 CBLCQ9ULV8 474 aa6.68□□□□□ -1.34
SMC4-223ENST00000493695 A0A087X1B8 175 aa6.67□□□□□ -1.34
SMC4-223ENST00000493695 KLF4O43474 513 aa6.67□□□□□ -1.34
SMC4-223ENST00000493695 AMY2AP04746 511 aa6.67□□□□□ -1.34
SMC4-223ENST00000493695 AMY2BP19961 511 aa6.67□□□□□ -1.34
SMC4-223ENST00000493695 DPTQ07507 201 aa6.67□□□□□ -1.34
SMC4-223ENST00000493695 LRSAM1Q6UWE0 723 aa6.67□□□□□ -1.34
SMC4-223ENST00000493695 CXXC5Q7LFL8 322 aaKnown RBP6.67□□□□□ -1.34
SMC4-223ENST00000493695 HIPK4Q8NE63 616 aa6.67□□□□□ -1.34
SMC4-223ENST00000493695 OR10A2Q9H208 303 aa6.67□□□□□ -1.34
SMC4-223ENST00000493695 PCDHA9Q9Y5H5 950 aa6.67□□□□□ -1.34
SMC4-223ENST00000493695 TRBV23-1A0A0A0MS06 115 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms