RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 MTMR1Q13613 665 aa11.89□□□□□ -0.51
PHACTR4-204ENST00000493669 PGM5Q15124 567 aa11.89□□□□□ -0.51
PHACTR4-204ENST00000493669 ELF2Q15723 593 aa11.89□□□□□ -0.51
PHACTR4-204ENST00000493669 SUPT20HL1Q3ZLR7 823 aa11.89□□□□□ -0.51
PHACTR4-204ENST00000493669 REPS2Q8NFH8 660 aa11.89□□□□□ -0.51
PHACTR4-204ENST00000493669 IL31RAQ8NI17 732 aa11.89□□□□□ -0.51
PHACTR4-204ENST00000493669 UBXN4Q92575 508 aa11.89□□□□□ -0.51
PHACTR4-204ENST00000493669 TIPINQ9BVW5 301 aa11.89□□□□□ -0.51
PHACTR4-204ENST00000493669 ASTN1O14525 1302 aa11.89□□□□□ -0.51
PHACTR4-204ENST00000493669 SSU72P8A0A1W2PR75 194 aa11.88□□□□□ -0.51
PHACTR4-204ENST00000493669 PRPF6O94906 941 aaKnown RBP11.88□□□□□ -0.51
PHACTR4-204ENST00000493669 MAPTP10636 758 aaKnown RBP11.88□□□□□ -0.51
PHACTR4-204ENST00000493669 LMNB1P20700 586 aa11.88□□□□□ -0.51
PHACTR4-204ENST00000493669 DSG3P32926 999 aa11.88□□□□□ -0.51
PHACTR4-204ENST00000493669 EPS15P42566 896 aa11.88□□□□□ -0.51
PHACTR4-204ENST00000493669 MRPS9P82933 396 aaKnown RBP11.88□□□□□ -0.51
PHACTR4-204ENST00000493669 ALCAMQ13740 583 aa11.88□□□□□ -0.51
PHACTR4-204ENST00000493669 SPA17Q15506 151 aa11.88□□□□□ -0.51
PHACTR4-204ENST00000493669 CACNA2D4Q7Z3S7 1137 aa11.88□□□□□ -0.51
PHACTR4-204ENST00000493669 KIAA1328Q86T90 577 aa11.88□□□□□ -0.51
PHACTR4-204ENST00000493669 SLC35F6Q8N357 371 aa11.88□□□□□ -0.51
PHACTR4-204ENST00000493669 MYCT1Q8N699 235 aa11.88□□□□□ -0.51
PHACTR4-204ENST00000493669 RDM1Q8NG50 284 aa11.88□□□□□ -0.51
PHACTR4-204ENST00000493669 GOLGA5Q8TBA6 731 aa11.88□□□□□ -0.51
PHACTR4-204ENST00000493669 KLRG1Q96E93 195 aa11.88□□□□□ -0.51
PHACTR4-204ENST00000493669 PDCD2LQ9BRP1 358 aa11.88□□□□□ -0.51
PHACTR4-204ENST00000493669 MKNK1Q9BUB5 465 aa11.88□□□□□ -0.51
PHACTR4-204ENST00000493669 CARD6Q9BX69 1037 aa11.88□□□□□ -0.51
PHACTR4-204ENST00000493669 IRX2Q9BZI1 471 aaPredicted RBP11.88□□□□□ -0.51
PHACTR4-204ENST00000493669 PXMP2Q9NR77 195 aa11.88□□□□□ -0.51
PHACTR4-204ENST00000493669 CDC23Q9UJX2 597 aa11.88□□□□□ -0.51
PHACTR4-204ENST00000493669 EPHB6O15197 1021 aa11.88□□□□□ -0.51
PHACTR4-204ENST00000493669 NR3C1P04150 777 aa11.88□□□□□ -0.51
PHACTR4-204ENST00000493669 EPB41P11171 864 aaKnown RBP11.88□□□□□ -0.51
PHACTR4-204ENST00000493669 SFNP31947 248 aa11.88□□□□□ -0.51
PHACTR4-204ENST00000493669 JAK3P52333 1124 aa11.88□□□□□ -0.51
PHACTR4-204ENST00000493669 MAPK8IP2Q13387 824 aaPredicted RBP11.88□□□□□ -0.51
PHACTR4-204ENST00000493669 NAA30Q147X3 362 aaPredicted RBP11.88□□□□□ -0.51
PHACTR4-204ENST00000493669 CEP112Q8N8E3 955 aa11.88□□□□□ -0.51
PHACTR4-204ENST00000493669 TRPM4Q8TD43 1214 aa11.88□□□□□ -0.51
PHACTR4-204ENST00000493669 ATG4CQ96DT6 458 aa11.88□□□□□ -0.51
PHACTR4-204ENST00000493669 RNF146Q9NTX7 359 aa11.88□□□□□ -0.51
PHACTR4-204ENST00000493669 RLFQ13129 1914 aa11.88□□□□□ -0.51
PHACTR4-204ENST00000493669 A0A0U1RQJ8 604 aa11.88□□□□□ -0.51
PHACTR4-204ENST00000493669 LRRC53A6NM62 1247 aa11.88□□□□□ -0.51
PHACTR4-204ENST00000493669 MAFGO15525 162 aa11.88□□□□□ -0.51
PHACTR4-204ENST00000493669 VAV2P52735 878 aa11.88□□□□□ -0.51
PHACTR4-204ENST00000493669 ATRIPQ8WXE1 791 aa11.88□□□□□ -0.51
PHACTR4-204ENST00000493669 JAKMIP2Q96AA8 810 aa11.88□□□□□ -0.51
PHACTR4-204ENST00000493669 TAAR1Q96RJ0 339 aa11.88□□□□□ -0.51
PHACTR4-204ENST00000493669 RMDN3Q96TC7 470 aa11.88□□□□□ -0.51
PHACTR4-204ENST00000493669 PLCB1Q9NQ66 1216 aa11.88□□□□□ -0.51
PHACTR4-204ENST00000493669 GGA3Q9NZ52 723 aa11.88□□□□□ -0.51
PHACTR4-204ENST00000493669 WRAP73Q9P2S5 460 aaPredicted RBP11.88□□□□□ -0.51
PHACTR4-204ENST00000493669 TCEAL9Q9UHQ7 104 aa11.88□□□□□ -0.51
PHACTR4-204ENST00000493669 PCDHB13Q9Y5F0 798 aa11.88□□□□□ -0.51
PHACTR4-204ENST00000493669 AFPP02771 609 aaKnown RBP11.87□□□□□ -0.51
PHACTR4-204ENST00000493669 QARSP47897 775 aaKnown RBP11.87□□□□□ -0.51
PHACTR4-204ENST00000493669 KRT76Q01546 638 aa11.87□□□□□ -0.51
PHACTR4-204ENST00000493669 KCNH2Q12809 1159 aa11.87□□□□□ -0.51
PHACTR4-204ENST00000493669 ITGB3BPQ13352 177 aaPredicted RBP11.87□□□□□ -0.51
PHACTR4-204ENST00000493669 MYBPC2Q14324 1141 aa11.87□□□□□ -0.51
PHACTR4-204ENST00000493669 COG2Q14746 738 aa11.87□□□□□ -0.51
PHACTR4-204ENST00000493669 CCDC122Q5T0U0 273 aa11.87□□□□□ -0.51
PHACTR4-204ENST00000493669 SLC30A10Q6XR72 485 aa11.87□□□□□ -0.51
PHACTR4-204ENST00000493669 RRAGAQ7L523 313 aa11.87□□□□□ -0.51
PHACTR4-204ENST00000493669 ZNF720Q7Z2F6 126 aa11.87□□□□□ -0.51
PHACTR4-204ENST00000493669 FAM178BQ8IXR5 827 aa11.87□□□□□ -0.51
PHACTR4-204ENST00000493669 NLGN2Q8NFZ4 835 aa11.87□□□□□ -0.51
PHACTR4-204ENST00000493669 SMCR8Q8TEV9 937 aaPredicted RBP11.87□□□□□ -0.51
PHACTR4-204ENST00000493669 ZKSCAN4Q969J2 545 aaPredicted RBP11.87□□□□□ -0.51
PHACTR4-204ENST00000493669 GPRASP2Q96D09 838 aa11.87□□□□□ -0.51
PHACTR4-204ENST00000493669 PURBQ96QR8 312 aaKnown RBP11.87□□□□□ -0.51
PHACTR4-204ENST00000493669 FIZ1Q96SL8 496 aa11.87□□□□□ -0.51
PHACTR4-204ENST00000493669 HOMER2Q9NSB8 354 aa11.87□□□□□ -0.51
PHACTR4-204ENST00000493669 TMOD4Q9NZQ9 345 aa11.87□□□□□ -0.51
PHACTR4-204ENST00000493669 ARHGAP20Q9P2F6 1191 aa11.87□□□□□ -0.51
PHACTR4-204ENST00000493669 GTPBP10A4D1E9 387 aaKnown RBP11.87□□□□□ -0.51
PHACTR4-204ENST00000493669 PPP1R12BO60237 982 aaPredicted RBP11.87□□□□□ -0.51
PHACTR4-204ENST00000493669 XRCC5P13010 732 aaKnown RBP11.87□□□□□ -0.51
PHACTR4-204ENST00000493669 EIF2AK2P19525 551 aaKnown RBP11.87□□□□□ -0.51
PHACTR4-204ENST00000493669 DGKZQ13574 1117 aa11.87□□□□□ -0.51
PHACTR4-204ENST00000493669 WHAMMP3Q1A5X7 153 aa11.87□□□□□ -0.51
PHACTR4-204ENST00000493669 ERCC6LQ2NKX8 1250 aa11.87□□□□□ -0.51
PHACTR4-204ENST00000493669 ARHGEF16Q5VV41 709 aa11.87□□□□□ -0.51
PHACTR4-204ENST00000493669 CCDC94Q9BW85 323 aaPredicted RBP11.87□□□□□ -0.51
PHACTR4-204ENST00000493669 LSM14BQ9BX40 385 aaKnown RBP11.87□□□□□ -0.51
PHACTR4-204ENST00000493669 MYO6Q9UM54 1294 aa11.87□□□□□ -0.51
PHACTR4-204ENST00000493669 ZHX2Q9Y6X8 837 aa11.87□□□□□ -0.51
PHACTR4-204ENST00000493669 SSC5DA1L4H1 1573 aa11.87□□□□□ -0.51
PHACTR4-204ENST00000493669 ZMYM2Q9UBW7 1377 aa11.87□□□□□ -0.51
PHACTR4-204ENST00000493669 USO1O60763 962 aaKnown RBP11.86□□□□□ -0.51
PHACTR4-204ENST00000493669 NOL4O94818 638 aa11.86□□□□□ -0.51
PHACTR4-204ENST00000493669 CCND2P30279 289 aa11.86□□□□□ -0.51
PHACTR4-204ENST00000493669 KIF5AQ12840 1032 aa11.86□□□□□ -0.51
PHACTR4-204ENST00000493669 SH3D19Q5HYK7 790 aa11.86□□□□□ -0.51
PHACTR4-204ENST00000493669 CATSPERGQ6ZRH7 1159 aa11.86□□□□□ -0.51
PHACTR4-204ENST00000493669 HS2ST1Q7LGA3 356 aa11.86□□□□□ -0.51
PHACTR4-204ENST00000493669 C4orf19Q8IY42 314 aa11.86□□□□□ -0.51
PHACTR4-204ENST00000493669 BANK1Q8NDB2 785 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms