RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 KDM3AQ9Y4C1 1321 aa17.64■□□□□ 0.41
HPS4-216ENST00000493455 A0A1B0GVL5 298 aa17.63■□□□□ 0.41
HPS4-216ENST00000493455 GOLGA6L22H0YM25 854 aa17.63■□□□□ 0.41
HPS4-216ENST00000493455 ZNF862O60290 1169 aa17.63■□□□□ 0.41
HPS4-216ENST00000493455 GADD45BO75293 160 aaPredicted RBP17.63■□□□□ 0.41
HPS4-216ENST00000493455 OATP04181 439 aa17.63■□□□□ 0.41
HPS4-216ENST00000493455 SPATA31C1P0DKV0 1188 aa17.63■□□□□ 0.41
HPS4-216ENST00000493455 HOXD8P13378 290 aaPredicted RBP17.63■□□□□ 0.41
HPS4-216ENST00000493455 RPA1P27694 616 aa17.63■□□□□ 0.41
HPS4-216ENST00000493455 NKX3-2P78367 333 aa17.63■□□□□ 0.41
HPS4-216ENST00000493455 PLCB4Q15147 1175 aa17.63■□□□□ 0.41
HPS4-216ENST00000493455 ECM1Q16610 540 aa17.63■□□□□ 0.41
HPS4-216ENST00000493455 PLA2G4FQ68DD2 849 aa17.63■□□□□ 0.41
HPS4-216ENST00000493455 PLPPR4Q7Z2D5 763 aa17.63■□□□□ 0.41
HPS4-216ENST00000493455 FSIP1Q8NA03 581 aa17.63■□□□□ 0.41
HPS4-216ENST00000493455 AFAP1L1Q8TED9 768 aa17.63■□□□□ 0.41
HPS4-216ENST00000493455 PIGOQ8TEQ8 1089 aa17.63■□□□□ 0.41
HPS4-216ENST00000493455 TSEN34Q9BSV6 310 aaKnown RBP17.63■□□□□ 0.41
HPS4-216ENST00000493455 POLR3CQ9BUI4 534 aaPredicted RBP17.63■□□□□ 0.41
HPS4-216ENST00000493455 KATNAL1Q9BW62 490 aa17.63■□□□□ 0.41
HPS4-216ENST00000493455 RNPEPQ9H4A4 650 aa17.63■□□□□ 0.41
HPS4-216ENST00000493455 ZSWIM4Q9H7M6 989 aa17.63■□□□□ 0.41
HPS4-216ENST00000493455 MAFBQ9Y5Q3 323 aaPredicted RBP17.63■□□□□ 0.41
HPS4-216ENST00000493455 SCN10AQ9Y5Y9 1956 aa17.62■□□□□ 0.41
HPS4-216ENST00000493455 ZBTB39O15060 712 aa17.62■□□□□ 0.41
HPS4-216ENST00000493455 DKC1O60832 514 aaKnown RBP eCLIP17.62■□□□□ 0.41
HPS4-216ENST00000493455 F2P00734 622 aa17.62■□□□□ 0.41
HPS4-216ENST00000493455 SSBP05455 408 aaKnown RBP eCLIP17.62■□□□□ 0.41
HPS4-216ENST00000493455 PLCG1P19174 1290 aa17.62■□□□□ 0.41
HPS4-216ENST00000493455 ATP4AP20648 1035 aa17.62■□□□□ 0.41
HPS4-216ENST00000493455 ATN1P54259 1190 aaPredicted RBP17.62■□□□□ 0.41
HPS4-216ENST00000493455 GRB10Q13322 594 aa17.62■□□□□ 0.41
HPS4-216ENST00000493455 DHX8Q14562 1220 aaKnown RBP17.62■□□□□ 0.41
HPS4-216ENST00000493455 NBPF20Q3BBV1 942 aa17.62■□□□□ 0.41
HPS4-216ENST00000493455 MTERF2Q49AM1 385 aa17.62■□□□□ 0.41
HPS4-216ENST00000493455 RESP18Q5W5W9 173 aa17.62■□□□□ 0.41
HPS4-216ENST00000493455 ADALQ6DHV7 355 aa17.62■□□□□ 0.41
HPS4-216ENST00000493455 C7orf31Q8N865 590 aa17.62■□□□□ 0.41
HPS4-216ENST00000493455 ZNF579Q8NAF0 562 aaKnown RBP17.62■□□□□ 0.41
HPS4-216ENST00000493455 PNMA5Q96PV4 448 aa17.62■□□□□ 0.41
HPS4-216ENST00000493455 HSD17B14Q9BPX1 270 aa17.62■□□□□ 0.41
HPS4-216ENST00000493455 BMP2KQ9NSY1 1161 aaPredicted RBP17.62■□□□□ 0.41
HPS4-216ENST00000493455 PHF24Q9UPV7 400 aa17.62■□□□□ 0.41
HPS4-216ENST00000493455 LOXHD1Q8IVV2 1947 aa17.62■□□□□ 0.41
HPS4-216ENST00000493455 TRIP12Q14669 1992 aaPredicted RBP17.62■□□□□ 0.41
HPS4-216ENST00000493455 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.61■□□□□ 0.41
HPS4-216ENST00000493455 E9PMD0 336 aa17.61■□□□□ 0.41
HPS4-216ENST00000493455 CABYRO75952 493 aa17.61■□□□□ 0.41
HPS4-216ENST00000493455 SMIM10L2AP0DMW4 78 aa17.61■□□□□ 0.41
HPS4-216ENST00000493455 SMIM10L2BP0DMW5 78 aa17.61■□□□□ 0.41
HPS4-216ENST00000493455 PFKFB1P16118 471 aa17.61■□□□□ 0.41
HPS4-216ENST00000493455 YWHABP31946 246 aaKnown RBP17.61■□□□□ 0.41
HPS4-216ENST00000493455 PPFIA1Q13136 1202 aa17.61■□□□□ 0.41
HPS4-216ENST00000493455 XKR9Q5GH70 373 aa17.61■□□□□ 0.41
HPS4-216ENST00000493455 ATP8B4Q8TF62 1192 aa17.61■□□□□ 0.41
HPS4-216ENST00000493455 TRAPPC12Q8WVT3 735 aa17.61■□□□□ 0.41
HPS4-216ENST00000493455 MRPS27Q92552 414 aaKnown RBP17.61■□□□□ 0.41
HPS4-216ENST00000493455 DHX58Q96C10 678 aa17.61■□□□□ 0.41
HPS4-216ENST00000493455 PAWRQ96IZ0 340 aaKnown RBP17.61■□□□□ 0.41
HPS4-216ENST00000493455 FAM167AQ96KS9 214 aa17.61■□□□□ 0.41
HPS4-216ENST00000493455 CCSER1Q9C0I3 900 aa17.61■□□□□ 0.41
HPS4-216ENST00000493455 NRBP2Q9NSY0 501 aa17.61■□□□□ 0.41
HPS4-216ENST00000493455 A0A087X0B3 334 aa17.6■□□□□ 0.41
HPS4-216ENST00000493455 CMA1P23946 247 aa17.6■□□□□ 0.41
HPS4-216ENST00000493455 STAT6P42226 847 aa17.6■□□□□ 0.41
HPS4-216ENST00000493455 MNX1P50219 401 aaPredicted RBP17.6■□□□□ 0.41
HPS4-216ENST00000493455 SLC26A2P50443 739 aa17.6■□□□□ 0.41
HPS4-216ENST00000493455 NPEPPSP55786 919 aa17.6■□□□□ 0.41
HPS4-216ENST00000493455 ITGA7Q13683 1181 aa17.6■□□□□ 0.41
HPS4-216ENST00000493455 XKR3Q5GH77 459 aa17.6■□□□□ 0.41
HPS4-216ENST00000493455 RRAGBQ5VZM2 374 aa17.6■□□□□ 0.41
HPS4-216ENST00000493455 CCDC73Q6ZRK6 1079 aa17.6■□□□□ 0.41
HPS4-216ENST00000493455 C4orf19Q8IY42 314 aa17.6■□□□□ 0.41
HPS4-216ENST00000493455 ANKLE1Q8NAG6 615 aa17.6■□□□□ 0.41
HPS4-216ENST00000493455 BBXQ8WY36 941 aaPredicted RBP17.6■□□□□ 0.41
HPS4-216ENST00000493455 NT5C3AQ9H0P0 336 aa17.6■□□□□ 0.41
HPS4-216ENST00000493455 GOLPH3LQ9H4A5 285 aa17.6■□□□□ 0.41
HPS4-216ENST00000493455 C11orf49Q9H6J7 331 aa17.6■□□□□ 0.41
HPS4-216ENST00000493455 SETD4Q9NVD3 440 aa17.6■□□□□ 0.41
HPS4-216ENST00000493455 HDAC6Q9UBN7 1215 aa17.6■□□□□ 0.41
HPS4-216ENST00000493455 A0A0U1RQG5 324 aaPredicted RBP17.59■□□□□ 0.41
HPS4-216ENST00000493455 HBP1O60381 514 aa17.59■□□□□ 0.41
HPS4-216ENST00000493455 INSRRP14616 1297 aa17.59■□□□□ 0.41
HPS4-216ENST00000493455 GRIK4Q16099 956 aa17.59■□□□□ 0.41
HPS4-216ENST00000493455 TMEM119Q4V9L6 283 aa17.59■□□□□ 0.41
HPS4-216ENST00000493455 CLEC17AQ6ZS10 378 aa17.59■□□□□ 0.41
HPS4-216ENST00000493455 ANO5Q75V66 913 aa17.59■□□□□ 0.41
HPS4-216ENST00000493455 OTUD6AQ7L8S5 288 aa17.59■□□□□ 0.41
HPS4-216ENST00000493455 KCNK18Q7Z418 384 aa17.59■□□□□ 0.41
HPS4-216ENST00000493455 TMEM87AQ8NBN3 555 aa17.59■□□□□ 0.41
HPS4-216ENST00000493455 ZBTB10Q96DT7 871 aa17.59■□□□□ 0.41
HPS4-216ENST00000493455 CEP170P1Q96L14 293 aa17.59■□□□□ 0.41
HPS4-216ENST00000493455 NACC1Q96RE7 527 aa17.59■□□□□ 0.41
HPS4-216ENST00000493455 KCNH3Q9ULD8 1083 aa17.59■□□□□ 0.41
HPS4-216ENST00000493455 DNM3Q9UQ16 869 aa17.59■□□□□ 0.41
HPS4-216ENST00000493455 EVPLQ92817 2033 aa17.59■□□□□ 0.41
HPS4-216ENST00000493455 A0A1W2PQ27 194 aa17.58■□□□□ 0.4
HPS4-216ENST00000493455 A0A1W2PQ64 194 aa17.58■□□□□ 0.4
HPS4-216ENST00000493455 A0A1W2PQD8 194 aa17.58■□□□□ 0.4
HPS4-216ENST00000493455 C17orf102A2RUQ5 167 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms