RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 SP2Q02086 613 aa15.07■□□□□ 0
MSH6-208ENST00000493177 SPECC1Q5M775 1068 aa15.07■□□□□ 0
MSH6-208ENST00000493177 TMEM240Q5SV17 173 aa15.07■□□□□ 0
MSH6-208ENST00000493177 ZNF365Q70YC5 407 aa15.07■□□□□ 0
MSH6-208ENST00000493177 DEFB128Q7Z7B8 93 aa15.07■□□□□ 0
MSH6-208ENST00000493177 TMEM87AQ8NBN3 555 aa15.07■□□□□ 0
MSH6-208ENST00000493177 GIMAP8Q8ND71 665 aaPredicted RBP15.07■□□□□ 0
MSH6-208ENST00000493177 RIT2Q99578 217 aa15.07■□□□□ 0
MSH6-208ENST00000493177 CSRNP2Q9H175 543 aa15.07■□□□□ 0
MSH6-208ENST00000493177 HDAC6Q9UBN7 1215 aa15.07■□□□□ 0
MSH6-208ENST00000493177 GBF1Q92538 1859 aa15.07■□□□□ 0
MSH6-208ENST00000493177 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.06■□□□□ 0
MSH6-208ENST00000493177 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.06■□□□□ 0
MSH6-208ENST00000493177 POTEMA6NI47 508 aa15.06■□□□□ 0
MSH6-208ENST00000493177 PSMD10O75832 226 aa15.06■□□□□ 0
MSH6-208ENST00000493177 F2P00734 622 aa15.06■□□□□ 0
MSH6-208ENST00000493177 ACTN1P12814 892 aa15.06■□□□□ 0
MSH6-208ENST00000493177 LONP1P36776 959 aaKnown RBP15.06■□□□□ 0
MSH6-208ENST00000493177 SMAD3P84022 425 aaKnown RBP15.06■□□□□ 0
MSH6-208ENST00000493177 UTP14CQ5TAP6 766 aaKnown RBP15.06■□□□□ 0
MSH6-208ENST00000493177 GDF6Q6KF10 455 aaPredicted RBP15.06■□□□□ 0
MSH6-208ENST00000493177 METTL7BQ6UX53 244 aa15.06■□□□□ 0
MSH6-208ENST00000493177 OTOP2Q7RTS6 562 aa15.06■□□□□ 0
MSH6-208ENST00000493177 KAT2BQ92831 832 aa15.06■□□□□ 0
MSH6-208ENST00000493177 SENP7Q9BQF6 1050 aa15.06■□□□□ 0
MSH6-208ENST00000493177 WNT8AQ9H1J5 351 aa15.06■□□□□ 0
MSH6-208ENST00000493177 UNC45AQ9H3U1 944 aa15.06■□□□□ 0
MSH6-208ENST00000493177 JPH1Q9HDC5 661 aaPredicted RBP15.06■□□□□ 0
MSH6-208ENST00000493177 LRWD1Q9UFC0 647 aa15.06■□□□□ 0
MSH6-208ENST00000493177 GTF2IRD1Q9UHL9 959 aa15.06■□□□□ 0
MSH6-208ENST00000493177 VAV3Q9UKW4 847 aa15.06■□□□□ 0
MSH6-208ENST00000493177 ZNF215Q9UL58 517 aaPredicted RBP15.06■□□□□ 0
MSH6-208ENST00000493177 SAMM50Q9Y512 469 aa15.06■□□□□ 0
MSH6-208ENST00000493177 NFASCO94856 1347 aa15.06■□□□□ 0
MSH6-208ENST00000493177 DNAH12Q6ZR08 3092 aa15.06■□□□□ 0
MSH6-208ENST00000493177 DDX11L8A8MPP1 907 aa15.05■□□□□ -0
MSH6-208ENST00000493177 DHX15O43143 795 aaKnown RBP15.05■□□□□ -0
MSH6-208ENST00000493177 GADD45BO75293 160 aaPredicted RBP15.05■□□□□ -0
MSH6-208ENST00000493177 LGALS2P05162 132 aa15.05■□□□□ -0
MSH6-208ENST00000493177 TXLNAP40222 546 aa15.05■□□□□ -0
MSH6-208ENST00000493177 KRT76Q01546 638 aa15.05■□□□□ -0
MSH6-208ENST00000493177 ZRSR1Q15695 479 aaKnown RBP15.05■□□□□ -0
MSH6-208ENST00000493177 AXDND1Q5T1B0 1012 aaPredicted RBP15.05■□□□□ -0
MSH6-208ENST00000493177 ADALQ6DHV7 355 aa15.05■□□□□ -0
MSH6-208ENST00000493177 MIER3Q7Z3K6 550 aa15.05■□□□□ -0
MSH6-208ENST00000493177 SESTD1Q86VW0 696 aa15.05■□□□□ -0
MSH6-208ENST00000493177 FSIP1Q8NA03 581 aa15.05■□□□□ -0
MSH6-208ENST00000493177 ZNF579Q8NAF0 562 aaKnown RBP15.05■□□□□ -0
MSH6-208ENST00000493177 RASSF8Q8NHQ8 419 aa15.05■□□□□ -0
MSH6-208ENST00000493177 ERMNQ8TAM6 284 aa15.05■□□□□ -0
MSH6-208ENST00000493177 CAGE1Q8TC20 777 aa15.05■□□□□ -0
MSH6-208ENST00000493177 AK8Q96MA6 479 aa15.05■□□□□ -0
MSH6-208ENST00000493177 FAM13BQ9NYF5 915 aa15.05■□□□□ -0
MSH6-208ENST00000493177 SLC9A2Q9UBY0 812 aa15.05■□□□□ -0
MSH6-208ENST00000493177 C17orf102A2RUQ5 167 aa15.04■□□□□ -0
MSH6-208ENST00000493177 PP2D1A8MPX8 630 aa15.04■□□□□ -0
MSH6-208ENST00000493177 H3BRB1 525 aa15.04■□□□□ -0
MSH6-208ENST00000493177 PITPNM1O00562 1244 aa15.04■□□□□ -0
MSH6-208ENST00000493177 PFKMP08237 780 aa15.04■□□□□ -0
MSH6-208ENST00000493177 RFC2P35250 354 aa15.04■□□□□ -0
MSH6-208ENST00000493177 UBA7P41226 1012 aa15.04■□□□□ -0
MSH6-208ENST00000493177 UBE2HP62256 183 aa15.04■□□□□ -0
MSH6-208ENST00000493177 PPP2R5CQ13362 524 aa15.04■□□□□ -0
MSH6-208ENST00000493177 PDIA5Q14554 519 aa15.04■□□□□ -0
MSH6-208ENST00000493177 KRT79Q5XKE5 535 aa15.04■□□□□ -0
MSH6-208ENST00000493177 IGSF22Q8N9C0 903 aa15.04■□□□□ -0
MSH6-208ENST00000493177 SNX29Q8TEQ0 813 aa15.04■□□□□ -0
MSH6-208ENST00000493177 MRPS27Q92552 414 aaKnown RBP15.04■□□□□ -0
MSH6-208ENST00000493177 SYMPKQ92797 1274 aaKnown RBP15.04■□□□□ -0
MSH6-208ENST00000493177 TUT1Q9H6E5 874 aaKnown RBP15.04■□□□□ -0
MSH6-208ENST00000493177 BCAS3Q9H6U6 928 aa15.04■□□□□ -0
MSH6-208ENST00000493177 LMBRD1Q9NUN5 540 aa15.04■□□□□ -0
MSH6-208ENST00000493177 A0A1W2PQ27 194 aa15.03■□□□□ -0
MSH6-208ENST00000493177 A0A1W2PQ64 194 aa15.03■□□□□ -0
MSH6-208ENST00000493177 A0A1W2PQD8 194 aa15.03■□□□□ -0
MSH6-208ENST00000493177 WDR64B1ANS9 1081 aa15.03■□□□□ -0
MSH6-208ENST00000493177 IQCF3P0C7M6 154 aa15.03■□□□□ -0
MSH6-208ENST00000493177 CDC25AP30304 524 aa15.03■□□□□ -0
MSH6-208ENST00000493177 JAK3P52333 1124 aa15.03■□□□□ -0
MSH6-208ENST00000493177 ZNF746Q6NUN9 644 aaPredicted RBP15.03■□□□□ -0
MSH6-208ENST00000493177 SHC4Q6S5L8 630 aa15.03■□□□□ -0
MSH6-208ENST00000493177 C16orf59Q7L2K0 433 aa15.03■□□□□ -0
MSH6-208ENST00000493177 CABP7Q86V35 215 aa15.03■□□□□ -0
MSH6-208ENST00000493177 AFAP1L1Q8TED9 768 aa15.03■□□□□ -0
MSH6-208ENST00000493177 HERVK_113Q902F9 699 aa15.03■□□□□ -0
MSH6-208ENST00000493177 EPSTI1Q96J88 318 aa15.03■□□□□ -0
MSH6-208ENST00000493177 CDK5RAP3Q96JB5 506 aa15.03■□□□□ -0
MSH6-208ENST00000493177 GPR20Q99678 358 aa15.03■□□□□ -0
MSH6-208ENST00000493177 DISC1Q9NRI5 854 aa15.03■□□□□ -0
MSH6-208ENST00000493177 STK24Q9Y6E0 443 aa15.03■□□□□ -0
MSH6-208ENST00000493177 SLC4A7Q9Y6M7 1214 aa15.03■□□□□ -0
MSH6-208ENST00000493177 A0A1B0GVL5 298 aa15.02■□□□□ -0
MSH6-208ENST00000493177 HAS3O00219 553 aa15.02■□□□□ -0
MSH6-208ENST00000493177 EML1O00423 815 aa15.02■□□□□ -0
MSH6-208ENST00000493177 CCNE2O96020 404 aa15.02■□□□□ -0
MSH6-208ENST00000493177 HOXD8P13378 290 aaPredicted RBP15.02■□□□□ -0
MSH6-208ENST00000493177 PTMSP20962 102 aa15.02■□□□□ -0
MSH6-208ENST00000493177 CMA1P23946 247 aa15.02■□□□□ -0
MSH6-208ENST00000493177 DNAJB2P25686 324 aa15.02■□□□□ -0
MSH6-208ENST00000493177 SFNP31947 248 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms