RNA–Protein interactions for RNA: ENST00000493116.5

SOX2-OT-214, SOX2 overlapping transcript, humanhuman

TSL 4

Gene SOX2-OT, Length 560 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-214ENST00000493116 PTPDC1A2A3K4 754 aa6.66□□□□□ -1.34
SOX2-OT-214ENST00000493116 HMGB1P1B2RPK0 211 aaPredicted RBP6.66□□□□□ -1.34
SOX2-OT-214ENST00000493116 C9orf172C9J069 976 aa6.66□□□□□ -1.34
SOX2-OT-214ENST00000493116 FZD9O00144 591 aa6.66□□□□□ -1.34
SOX2-OT-214ENST00000493116 MYO1BO43795 1136 aa6.66□□□□□ -1.34
SOX2-OT-214ENST00000493116 ZNF205O95201 554 aa6.66□□□□□ -1.34
SOX2-OT-214ENST00000493116 SOD2P04179 222 aa6.66□□□□□ -1.34
SOX2-OT-214ENST00000493116 IL13P35225 146 aa6.66□□□□□ -1.34
SOX2-OT-214ENST00000493116 AMPHP49418 695 aa6.66□□□□□ -1.34
SOX2-OT-214ENST00000493116 PHC1P78364 1004 aa6.66□□□□□ -1.34
SOX2-OT-214ENST00000493116 SLFN5Q08AF3 891 aa6.66□□□□□ -1.34
SOX2-OT-214ENST00000493116 GBX1Q14549 363 aa6.66□□□□□ -1.34
SOX2-OT-214ENST00000493116 ZRSR2Q15696 482 aaKnown RBP6.66□□□□□ -1.34
SOX2-OT-214ENST00000493116 CRY1Q16526 586 aa6.66□□□□□ -1.34
SOX2-OT-214ENST00000493116 SKOR2Q2VWA4 1001 aaPredicted RBP6.66□□□□□ -1.34
SOX2-OT-214ENST00000493116 C4orf46Q504U0 113 aa6.66□□□□□ -1.34
SOX2-OT-214ENST00000493116 PAOXQ6QHF9 649 aa6.66□□□□□ -1.34
SOX2-OT-214ENST00000493116 RASSF3Q86WH2 238 aa6.66□□□□□ -1.34
SOX2-OT-214ENST00000493116 C2orf69Q8N8R5 385 aa6.66□□□□□ -1.34
SOX2-OT-214ENST00000493116 LINC00116Q8NCU8 138 aa6.66□□□□□ -1.34
SOX2-OT-214ENST00000493116 FBLIM1Q8WUP2 373 aa6.66□□□□□ -1.34
SOX2-OT-214ENST00000493116 CHTF18Q8WVB6 975 aa6.66□□□□□ -1.34
SOX2-OT-214ENST00000493116 SSH1Q8WYL5 1049 aa6.66□□□□□ -1.34
SOX2-OT-214ENST00000493116 SLC5A5Q92911 643 aa6.66□□□□□ -1.34
SOX2-OT-214ENST00000493116 TTC17Q96AE7 1141 aa6.66□□□□□ -1.34
SOX2-OT-214ENST00000493116 NACC1Q96RE7 527 aa6.66□□□□□ -1.34
SOX2-OT-214ENST00000493116 MPHOSPH6Q99547 160 aaKnown RBP6.66□□□□□ -1.34
SOX2-OT-214ENST00000493116 SARGQ9BW04 601 aa6.66□□□□□ -1.34
SOX2-OT-214ENST00000493116 ADGRE2Q9UHX3 823 aa6.66□□□□□ -1.34
SOX2-OT-214ENST00000493116 IL16Q14005 1332 aa6.66□□□□□ -1.34
SOX2-OT-214ENST00000493116 NPHP3Q7Z494 1330 aa6.66□□□□□ -1.34
SOX2-OT-214ENST00000493116 SBNO1A3KN83 1393 aa6.66□□□□□ -1.34
SOX2-OT-214ENST00000493116 FLT4P35916 1363 aa6.66□□□□□ -1.34
SOX2-OT-214ENST00000493116 COL3A1P02461 1466 aaPredicted RBP6.66□□□□□ -1.34
SOX2-OT-214ENST00000493116 C1orf167Q5SNV9 1468 aa6.66□□□□□ -1.34
SOX2-OT-214ENST00000493116 FAM95CA0A1B0GW59 222 aa6.65□□□□□ -1.34
SOX2-OT-214ENST00000493116 CCDC66A2RUB6 948 aa6.65□□□□□ -1.34
SOX2-OT-214ENST00000493116 STXBP3O00186 592 aa6.65□□□□□ -1.34
SOX2-OT-214ENST00000493116 ARNTLO00327 626 aa6.65□□□□□ -1.34
SOX2-OT-214ENST00000493116 MSCO60682 206 aa6.65□□□□□ -1.34
SOX2-OT-214ENST00000493116 LTFP02788 710 aa6.65□□□□□ -1.34
SOX2-OT-214ENST00000493116 PLS3P13797 630 aa6.65□□□□□ -1.34
SOX2-OT-214ENST00000493116 COL8A1P27658 744 aa6.65□□□□□ -1.34
SOX2-OT-214ENST00000493116 TPP2P29144 1249 aaPredicted RBP6.65□□□□□ -1.34
SOX2-OT-214ENST00000493116 LSP1P33241 339 aa6.65□□□□□ -1.34
SOX2-OT-214ENST00000493116 GRIK1P39086 918 aa6.65□□□□□ -1.34
SOX2-OT-214ENST00000493116 TMPOP42166 694 aaKnown RBP6.65□□□□□ -1.34
SOX2-OT-214ENST00000493116 KRT28Q7Z3Y7 464 aa6.65□□□□□ -1.34
SOX2-OT-214ENST00000493116 TRMT2AQ8IZ69 625 aaKnown RBP6.65□□□□□ -1.34
SOX2-OT-214ENST00000493116 RCBTB1Q8NDN9 531 aa6.65□□□□□ -1.34
SOX2-OT-214ENST00000493116 ZNF526Q8TF50 670 aaPredicted RBP6.65□□□□□ -1.34
SOX2-OT-214ENST00000493116 IL17RAQ96F46 866 aa6.65□□□□□ -1.34
SOX2-OT-214ENST00000493116 PLEKHF1Q96S99 279 aa6.65□□□□□ -1.34
SOX2-OT-214ENST00000493116 TMEFF2Q9UIK5 374 aaPredicted RBP6.65□□□□□ -1.34
SOX2-OT-214ENST00000493116 COQ6Q9Y2Z9 468 aa6.65□□□□□ -1.34
SOX2-OT-214ENST00000493116 RNF123Q5XPI4 1314 aa6.65□□□□□ -1.35
SOX2-OT-214ENST00000493116 RTL1A6NKG5 1358 aa6.65□□□□□ -1.35
SOX2-OT-214ENST00000493116 NPHP3-ACAD11A0A0J9YXS1 232 aa6.64□□□□□ -1.35
SOX2-OT-214ENST00000493116 PRPF3O43395 683 aaKnown RBP6.64□□□□□ -1.35
SOX2-OT-214ENST00000493116 SRGAP2CP0DJJ0 459 aa6.64□□□□□ -1.35
SOX2-OT-214ENST00000493116 YBX3P16989 372 aaKnown RBP eCLIP6.64□□□□□ -1.35
SOX2-OT-214ENST00000493116 AKAP5P24588 427 aa6.64□□□□□ -1.35
SOX2-OT-214ENST00000493116 MAP4P27816 1152 aaKnown RBP6.64□□□□□ -1.35
SOX2-OT-214ENST00000493116 RIPK4P57078 832 aa6.64□□□□□ -1.35
SOX2-OT-214ENST00000493116 LSAMPQ13449 338 aa6.64□□□□□ -1.35
SOX2-OT-214ENST00000493116 RRS1Q15050 365 aaKnown RBP6.64□□□□□ -1.35
SOX2-OT-214ENST00000493116 DDB1Q16531 1140 aa6.64□□□□□ -1.35
SOX2-OT-214ENST00000493116 ABCB5Q2M3G0 1257 aa6.64□□□□□ -1.35
SOX2-OT-214ENST00000493116 DUSP27Q5VZP5 1158 aa6.64□□□□□ -1.35
SOX2-OT-214ENST00000493116 CRTC3Q6UUV7 619 aa6.64□□□□□ -1.35
SOX2-OT-214ENST00000493116 PNMA8AQ86V59 439 aaPredicted RBP6.64□□□□□ -1.35
SOX2-OT-214ENST00000493116 ALYREFQ86V81 257 aaKnown RBP6.64□□□□□ -1.35
SOX2-OT-214ENST00000493116 CCDC103Q8IW40 242 aa6.64□□□□□ -1.35
SOX2-OT-214ENST00000493116 AGGF1Q8N302 714 aaeCLIP6.64□□□□□ -1.35
SOX2-OT-214ENST00000493116 CLRN3Q8NCR9 226 aa6.64□□□□□ -1.35
SOX2-OT-214ENST00000493116 PJA1Q8NG27 643 aa6.64□□□□□ -1.35
SOX2-OT-214ENST00000493116 CLIP3Q96DZ5 547 aa6.64□□□□□ -1.35
SOX2-OT-214ENST00000493116 TCTN2Q96GX1 697 aa6.64□□□□□ -1.35
SOX2-OT-214ENST00000493116 MYRFLQ96LU7 910 aa6.64□□□□□ -1.35
SOX2-OT-214ENST00000493116 BOCQ9BWV1 1114 aa6.64□□□□□ -1.35
SOX2-OT-214ENST00000493116 OXSMQ9NWU1 459 aa6.64□□□□□ -1.35
SOX2-OT-214ENST00000493116 CLEC1BQ9P126 229 aa6.64□□□□□ -1.35
SOX2-OT-214ENST00000493116 SPO11Q9Y5K1 396 aa6.64□□□□□ -1.35
SOX2-OT-214ENST00000493116 KIF1AQ12756 1690 aa6.64□□□□□ -1.35
SOX2-OT-214ENST00000493116 VSTM5A8MXK1 200 aa6.63□□□□□ -1.35
SOX2-OT-214ENST00000493116 H7C1D1 291 aa6.63□□□□□ -1.35
SOX2-OT-214ENST00000493116 ARHGEF10O15013 1369 aa6.63□□□□□ -1.35
SOX2-OT-214ENST00000493116 TBC1D8O95759 1140 aa6.63□□□□□ -1.35
SOX2-OT-214ENST00000493116 CBX7O95931 251 aa6.63□□□□□ -1.35
SOX2-OT-214ENST00000493116 NBPF7P0C2Y1 421 aaPredicted RBP6.63□□□□□ -1.35
SOX2-OT-214ENST00000493116 PF4V1P10720 104 aa6.63□□□□□ -1.35
SOX2-OT-214ENST00000493116 GLB1P16278 677 aa6.63□□□□□ -1.35
SOX2-OT-214ENST00000493116 LPOP22079 712 aaPredicted RBP6.63□□□□□ -1.35
SOX2-OT-214ENST00000493116 GRK2P25098 689 aa6.63□□□□□ -1.35
SOX2-OT-214ENST00000493116 PRKAR2BP31323 418 aa6.63□□□□□ -1.35
SOX2-OT-214ENST00000493116 RRP1P56182 461 aaKnown RBP6.63□□□□□ -1.35
SOX2-OT-214ENST00000493116 PCBP3P57721 371 aaKnown RBP6.63□□□□□ -1.35
SOX2-OT-214ENST00000493116 MST1RQ04912 1400 aa6.63□□□□□ -1.35
SOX2-OT-214ENST00000493116 TCIRG1Q13488 830 aa6.63□□□□□ -1.35
SOX2-OT-214ENST00000493116 PICALMQ13492 652 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms