RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 CHIC2Q9UKJ5 165 aa4.66□□□□□ -1.66
BRCA1-220ENST00000492859 CCPG1Q9ULG6 757 aa4.66□□□□□ -1.66
BRCA1-220ENST00000492859 SNX8Q9Y5X2 465 aa4.66□□□□□ -1.66
BRCA1-220ENST00000492859 ZFP37Q9Y6Q3 630 aaPredicted RBP4.66□□□□□ -1.66
BRCA1-220ENST00000492859 GAKO14976 1311 aa4.66□□□□□ -1.66
BRCA1-220ENST00000492859 F6X3S4 739 aa4.65□□□□□ -1.66
BRCA1-220ENST00000492859 BIN1O00499 593 aa4.65□□□□□ -1.66
BRCA1-220ENST00000492859 RNF113AO15541 343 aaKnown RBP4.65□□□□□ -1.66
BRCA1-220ENST00000492859 RIPK2O43353 540 aa4.65□□□□□ -1.66
BRCA1-220ENST00000492859 KDM1AO60341 852 aa4.65□□□□□ -1.66
BRCA1-220ENST00000492859 GDF9O60383 454 aa4.65□□□□□ -1.66
BRCA1-220ENST00000492859 KCNJ13O60928 360 aa4.65□□□□□ -1.66
BRCA1-220ENST00000492859 SRGAP2O75044 1071 aa4.65□□□□□ -1.66
BRCA1-220ENST00000492859 AOC2O75106 756 aa4.65□□□□□ -1.66
BRCA1-220ENST00000492859 ERLIN1O75477 346 aa4.65□□□□□ -1.66
BRCA1-220ENST00000492859 SLC22A3O75751 556 aa4.65□□□□□ -1.66
BRCA1-220ENST00000492859 ENDOD1O94919 500 aa4.65□□□□□ -1.66
BRCA1-220ENST00000492859 YEATS4O95619 227 aa4.65□□□□□ -1.66
BRCA1-220ENST00000492859 ADCY5O95622 1261 aa4.65□□□□□ -1.66
BRCA1-220ENST00000492859 POU2F2P09086 479 aa4.65□□□□□ -1.66
BRCA1-220ENST00000492859 SOX6P35712 828 aa4.65□□□□□ -1.66
BRCA1-220ENST00000492859 TKTL1P51854 596 aa4.65□□□□□ -1.66
BRCA1-220ENST00000492859 HDAC4P56524 1084 aa4.65□□□□□ -1.66
BRCA1-220ENST00000492859 BEX3Q00994 111 aa4.65□□□□□ -1.66
BRCA1-220ENST00000492859 FOXC1Q12948 553 aa4.65□□□□□ -1.66
BRCA1-220ENST00000492859 DBN1Q16643 649 aa4.65□□□□□ -1.66
BRCA1-220ENST00000492859 SLC10A6Q3KNW5 377 aa4.65□□□□□ -1.66
BRCA1-220ENST00000492859 CEP55Q53EZ4 464 aa4.65□□□□□ -1.66
BRCA1-220ENST00000492859 RPUSD3Q6P087 351 aaKnown RBP4.65□□□□□ -1.66
BRCA1-220ENST00000492859 XKR5Q6UX68 686 aa4.65□□□□□ -1.66
BRCA1-220ENST00000492859 SEPT14Q6ZU15 432 aa4.65□□□□□ -1.66
BRCA1-220ENST00000492859 IKBIPQ70UQ0 350 aa4.65□□□□□ -1.66
BRCA1-220ENST00000492859 PDZD4Q76G19 769 aaPredicted RBP4.65□□□□□ -1.66
BRCA1-220ENST00000492859 CHST15Q7LFX5 561 aaPredicted RBP4.65□□□□□ -1.66
BRCA1-220ENST00000492859 TMTC1Q8IUR5 882 aa4.65□□□□□ -1.66
BRCA1-220ENST00000492859 NOSTRINQ8IVI9 506 aa4.65□□□□□ -1.66
BRCA1-220ENST00000492859 CCDC13Q8IYE1 715 aa4.65□□□□□ -1.66
BRCA1-220ENST00000492859 CCDC170Q8IYT3 715 aa4.65□□□□□ -1.66
BRCA1-220ENST00000492859 ESX1Q8N693 406 aa4.65□□□□□ -1.66
BRCA1-220ENST00000492859 C2orf69Q8N8R5 385 aa4.65□□□□□ -1.66
BRCA1-220ENST00000492859 AVL9Q8NBF6 648 aa4.65□□□□□ -1.66
BRCA1-220ENST00000492859 ZBTB44Q8NCP5 570 aa4.65□□□□□ -1.66
BRCA1-220ENST00000492859 BBOF1Q8ND07 529 aa4.65□□□□□ -1.66
BRCA1-220ENST00000492859 MDM1Q8TC05 714 aa4.65□□□□□ -1.66
BRCA1-220ENST00000492859 USP13Q92995 863 aaPredicted RBP4.65□□□□□ -1.66
BRCA1-220ENST00000492859 ARL8AQ96BM9 186 aa4.65□□□□□ -1.66
BRCA1-220ENST00000492859 CLUHP3Q96NS8 147 aa4.65□□□□□ -1.66
BRCA1-220ENST00000492859 TMEM237Q96Q45 408 aa4.65□□□□□ -1.66
BRCA1-220ENST00000492859 UQCC2Q9BRT2 126 aa4.65□□□□□ -1.66
BRCA1-220ENST00000492859 SIL1Q9H173 461 aa4.65□□□□□ -1.66
BRCA1-220ENST00000492859 WNT5BQ9H1J7 359 aa4.65□□□□□ -1.66
BRCA1-220ENST00000492859 MROH8Q9H579 483 aa4.65□□□□□ -1.66
BRCA1-220ENST00000492859 UBN1Q9NPG3 1134 aa4.65□□□□□ -1.66
BRCA1-220ENST00000492859 ITM2CQ9NQX7 267 aa4.65□□□□□ -1.66
BRCA1-220ENST00000492859 INTS10Q9NVR2 710 aaKnown RBP4.65□□□□□ -1.66
BRCA1-220ENST00000492859 PPP1R14DQ9NXH3 145 aa4.65□□□□□ -1.66
BRCA1-220ENST00000492859 ACTR10Q9NZ32 417 aa4.65□□□□□ -1.66
BRCA1-220ENST00000492859 IL1RAPL1Q9NZN1 696 aa4.65□□□□□ -1.66
BRCA1-220ENST00000492859 PKD2L1Q9P0L9 805 aa4.65□□□□□ -1.66
BRCA1-220ENST00000492859 CCDC39Q9UFE4 941 aa4.65□□□□□ -1.66
BRCA1-220ENST00000492859 DNM3Q9UQ16 869 aa4.65□□□□□ -1.66
BRCA1-220ENST00000492859 PRELID1Q9Y255 219 aa4.65□□□□□ -1.66
BRCA1-220ENST00000492859 ANKRD6Q9Y2G4 727 aa4.65□□□□□ -1.66
BRCA1-220ENST00000492859 TMED5Q9Y3A6 229 aa4.65□□□□□ -1.66
BRCA1-220ENST00000492859 PARP3Q9Y6F1 533 aa4.65□□□□□ -1.66
BRCA1-220ENST00000492859 A0A0G2JPF8 293 aa4.65□□□□□ -1.67
BRCA1-220ENST00000492859 SLC12A8A0AV02 714 aa4.65□□□□□ -1.67
BRCA1-220ENST00000492859 HNRNPCL3B7ZW38 293 aa4.65□□□□□ -1.67
BRCA1-220ENST00000492859 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.65□□□□□ -1.67
BRCA1-220ENST00000492859 SGK1O00141 431 aa4.65□□□□□ -1.67
BRCA1-220ENST00000492859 MTSS1O43312 755 aa4.65□□□□□ -1.67
BRCA1-220ENST00000492859 CEP104O60308 925 aa4.65□□□□□ -1.67
BRCA1-220ENST00000492859 DOK2O60496 412 aa4.65□□□□□ -1.67
BRCA1-220ENST00000492859 TSPAN3O60637 253 aa4.65□□□□□ -1.67
BRCA1-220ENST00000492859 DIAPH2O60879 1101 aa4.65□□□□□ -1.67
BRCA1-220ENST00000492859 SIN3BO75182 1162 aa4.65□□□□□ -1.67
BRCA1-220ENST00000492859 GJB6O95452 261 aa4.65□□□□□ -1.67
BRCA1-220ENST00000492859 OLFM2O95897 454 aa4.65□□□□□ -1.67
BRCA1-220ENST00000492859 MYCP01106 439 aaPredicted RBP4.65□□□□□ -1.67
BRCA1-220ENST00000492859 ADRB2P07550 413 aa4.65□□□□□ -1.67
BRCA1-220ENST00000492859 PDHA1P08559 390 aa4.65□□□□□ -1.67
BRCA1-220ENST00000492859 C6orf222P0C671 652 aaPredicted RBP4.65□□□□□ -1.67
BRCA1-220ENST00000492859 HNRNPCL4P0DMR1 293 aa4.65□□□□□ -1.67
BRCA1-220ENST00000492859 CYP2A6P11509 494 aaPredicted RBP4.65□□□□□ -1.67
BRCA1-220ENST00000492859 HSPA6P17066 643 aa4.65□□□□□ -1.67
BRCA1-220ENST00000492859 SDSP20132 328 aa4.65□□□□□ -1.67
BRCA1-220ENST00000492859 CYP2C19P33261 490 aa4.65□□□□□ -1.67
BRCA1-220ENST00000492859 TUBP50607 506 aa4.65□□□□□ -1.67
BRCA1-220ENST00000492859 DRG2P55039 364 aaKnown RBP4.65□□□□□ -1.67
BRCA1-220ENST00000492859 SLC26A5P58743 744 aa4.65□□□□□ -1.67
BRCA1-220ENST00000492859 TMPRSS15P98073 1019 aa4.65□□□□□ -1.67
BRCA1-220ENST00000492859 ACY1Q03154 408 aa4.65□□□□□ -1.67
BRCA1-220ENST00000492859 COL9A2Q14055 689 aaPredicted RBP4.65□□□□□ -1.67
BRCA1-220ENST00000492859 BBS9Q3SYG4 887 aa4.65□□□□□ -1.67
BRCA1-220ENST00000492859 FCRLBQ6BAA4 426 aa4.65□□□□□ -1.67
BRCA1-220ENST00000492859 GPR139Q6DWJ6 353 aa4.65□□□□□ -1.67
BRCA1-220ENST00000492859 ARHGAP11AQ6P4F7 1023 aa4.65□□□□□ -1.67
BRCA1-220ENST00000492859 WDR73Q6P4I2 378 aa4.65□□□□□ -1.67
BRCA1-220ENST00000492859 C11orf88Q6PI97 169 aa4.65□□□□□ -1.67
BRCA1-220ENST00000492859 ATF7IPQ6VMQ6 1270 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms