RNA–Protein interactions for RNA: ENST00000492858.6

GPNMB-214, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 721 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-214ENST00000492858 SQORQ9Y6N5 450 aa13.92□□□□□ -0.18
GPNMB-214ENST00000492858 FRMPD4Q14CM0 1322 aa13.91□□□□□ -0.18
GPNMB-214ENST00000492858 SALL3Q9BXA9 1300 aa13.91□□□□□ -0.18
GPNMB-214ENST00000492858 PLXNA4Q9HCM2 1894 aa13.91□□□□□ -0.18
GPNMB-214ENST00000492858 ZFHX4Q86UP3 3567 aa13.91□□□□□ -0.18
GPNMB-214ENST00000492858 TBKBP1A7MCY6 615 aa13.91□□□□□ -0.18
GPNMB-214ENST00000492858 FSCN2O14926 492 aa13.91□□□□□ -0.18
GPNMB-214ENST00000492858 ASGR2P07307 311 aa13.91□□□□□ -0.18
GPNMB-214ENST00000492858 HOXB8P17481 243 aaPredicted RBP13.91□□□□□ -0.18
GPNMB-214ENST00000492858 NT5C2P49902 561 aa13.91□□□□□ -0.18
GPNMB-214ENST00000492858 CLCN5P51795 746 aa13.91□□□□□ -0.18
GPNMB-214ENST00000492858 TMEM62Q0P6H9 643 aa13.91□□□□□ -0.18
GPNMB-214ENST00000492858 RASGRP4Q8TDF6 673 aa13.91□□□□□ -0.18
GPNMB-214ENST00000492858 GLG1Q92896 1179 aa13.91□□□□□ -0.18
GPNMB-214ENST00000492858 POMKQ9H5K3 350 aa13.91□□□□□ -0.18
GPNMB-214ENST00000492858 ERAP1Q9NZ08 941 aa13.91□□□□□ -0.18
GPNMB-214ENST00000492858 ZSWIM5Q9P217 1185 aa13.91□□□□□ -0.18
GPNMB-214ENST00000492858 HCSTQ9UBK5 93 aa13.91□□□□□ -0.18
GPNMB-214ENST00000492858 PCDHB7Q9Y5E2 793 aa13.91□□□□□ -0.18
GPNMB-214ENST00000492858 M0QZ92 97 aa13.9□□□□□ -0.18
GPNMB-214ENST00000492858 RPLP2P05387 115 aaKnown RBP13.9□□□□□ -0.18
GPNMB-214ENST00000492858 SARSP49591 514 aaKnown RBP13.9□□□□□ -0.18
GPNMB-214ENST00000492858 TRAF1Q13077 416 aa13.9□□□□□ -0.18
GPNMB-214ENST00000492858 DGLUCYQ7Z3D6 616 aa13.9□□□□□ -0.18
GPNMB-214ENST00000492858 COLGALT1Q8NBJ5 622 aa13.9□□□□□ -0.18
GPNMB-214ENST00000492858 FLCNQ8NFG4 579 aa13.9□□□□□ -0.18
GPNMB-214ENST00000492858 RMDN1Q96DB5 314 aa13.9□□□□□ -0.18
GPNMB-214ENST00000492858 PIGSQ96S52 555 aa13.9□□□□□ -0.18
GPNMB-214ENST00000492858 TCF25Q9BQ70 676 aa13.9□□□□□ -0.18
GPNMB-214ENST00000492858 TMX1Q9H3N1 280 aa13.9□□□□□ -0.18
GPNMB-214ENST00000492858 ENTPD7Q9NQZ7 604 aa13.9□□□□□ -0.18
GPNMB-214ENST00000492858 MAD2L2Q9UI95 211 aa13.9□□□□□ -0.18
GPNMB-214ENST00000492858 RCAN3Q9UKA8 241 aa13.9□□□□□ -0.18
GPNMB-214ENST00000492858 CACNA1BQ00975 2339 aa13.9□□□□□ -0.18
GPNMB-214ENST00000492858 IGSF9BQ9UPX0 1349 aa13.9□□□□□ -0.19
GPNMB-214ENST00000492858 NCOR2Q9Y618 2525 aa13.89□□□□□ -0.19
GPNMB-214ENST00000492858 EP300Q09472 2414 aaPredicted RBP13.89□□□□□ -0.19
GPNMB-214ENST00000492858 HIDE1A8MVS5 230 aa13.89□□□□□ -0.19
GPNMB-214ENST00000492858 TMEM266Q2M3C6 531 aa13.89□□□□□ -0.19
GPNMB-214ENST00000492858 SLC35G1Q2M3R5 365 aa13.89□□□□□ -0.19
GPNMB-214ENST00000492858 TPRNQ4KMQ1 711 aa13.89□□□□□ -0.19
GPNMB-214ENST00000492858 IFIT1BQ5T764 474 aaKnown RBP13.89□□□□□ -0.19
GPNMB-214ENST00000492858 CES5AQ6NT32 575 aa13.89□□□□□ -0.19
GPNMB-214ENST00000492858 GIMAP8Q8ND71 665 aaPredicted RBP13.89□□□□□ -0.19
GPNMB-214ENST00000492858 SEPT1Q8WYJ6 367 aa13.89□□□□□ -0.19
GPNMB-214ENST00000492858 NECTIN4Q96NY8 510 aa13.89□□□□□ -0.19
GPNMB-214ENST00000492858 UBAC1Q9BSL1 405 aa13.89□□□□□ -0.19
GPNMB-214ENST00000492858 TYW1Q9NV66 732 aaKnown RBP13.89□□□□□ -0.19
GPNMB-214ENST00000492858 EPG5Q9HCE0 2579 aa13.89□□□□□ -0.19
GPNMB-214ENST00000492858 DOCK5Q9H7D0 1870 aa13.89□□□□□ -0.19
GPNMB-214ENST00000492858 GSTTP1A0A1W2PQM5 241 aa13.88□□□□□ -0.19
GPNMB-214ENST00000492858 PALM3A6NDB9 673 aaPredicted RBP13.88□□□□□ -0.19
GPNMB-214ENST00000492858 RRN3P2A6NIE6 340 aa13.88□□□□□ -0.19
GPNMB-214ENST00000492858 INSRRP14616 1297 aa13.88□□□□□ -0.19
GPNMB-214ENST00000492858 MFAP1P55081 439 aaKnown RBP13.88□□□□□ -0.19
GPNMB-214ENST00000492858 NFX1Q12986 1120 aaKnown RBP13.88□□□□□ -0.19
GPNMB-214ENST00000492858 ANGPT1Q15389 498 aa13.88□□□□□ -0.19
GPNMB-214ENST00000492858 FAM102BQ5T8I3 360 aa13.88□□□□□ -0.19
GPNMB-214ENST00000492858 CWF19L1Q69YN2 538 aaKnown RBP13.88□□□□□ -0.19
GPNMB-214ENST00000492858 KCNG4Q8TDN1 519 aa13.88□□□□□ -0.19
GPNMB-214ENST00000492858 MRPS27Q92552 414 aaKnown RBP13.88□□□□□ -0.19
GPNMB-214ENST00000492858 CASP10Q92851 521 aa13.88□□□□□ -0.19
GPNMB-214ENST00000492858 CELF4Q9BZC1 486 aaKnown RBP13.88□□□□□ -0.19
GPNMB-214ENST00000492858 ADAM7Q9H2U9 754 aa13.88□□□□□ -0.19
GPNMB-214ENST00000492858 SMARCAD1Q9H4L7 1026 aa13.88□□□□□ -0.19
GPNMB-214ENST00000492858 NGRNQ9NPE2 291 aaKnown RBP13.88□□□□□ -0.19
GPNMB-214ENST00000492858 LIMD1Q9UGP4 676 aa13.88□□□□□ -0.19
GPNMB-214ENST00000492858 PUF60Q9UHX1 559 aaKnown RBP13.88□□□□□ -0.19
GPNMB-214ENST00000492858 LZTS1Q9Y250 596 aa13.88□□□□□ -0.19
GPNMB-214ENST00000492858 KAT6AQ92794 2004 aa13.87□□□□□ -0.19
GPNMB-214ENST00000492858 MGEA5O60502 916 aa13.87□□□□□ -0.19
GPNMB-214ENST00000492858 ATP9AO75110 1047 aa13.87□□□□□ -0.19
GPNMB-214ENST00000492858 KRT37O76014 449 aa13.87□□□□□ -0.19
GPNMB-214ENST00000492858 LAG3P18627 525 aa13.87□□□□□ -0.19
GPNMB-214ENST00000492858 PDE1AP54750 535 aa13.87□□□□□ -0.19
GPNMB-214ENST00000492858 ITIH3Q06033 890 aa13.87□□□□□ -0.19
GPNMB-214ENST00000492858 PCNX4Q63HM2 1172 aa13.87□□□□□ -0.19
GPNMB-214ENST00000492858 NLRX1Q86UT6 975 aa13.87□□□□□ -0.19
GPNMB-214ENST00000492858 TDRD5Q8NAT2 981 aaKnown RBP13.87□□□□□ -0.19
GPNMB-214ENST00000492858 RIOX1Q9H6W3 641 aa13.87□□□□□ -0.19
GPNMB-214ENST00000492858 ZBTB47Q9UFB7 747 aaPredicted RBP13.87□□□□□ -0.19
GPNMB-214ENST00000492858 PCDHB15Q9Y5E8 787 aa13.87□□□□□ -0.19
GPNMB-214ENST00000492858 HCFC2Q9Y5Z7 792 aa13.87□□□□□ -0.19
GPNMB-214ENST00000492858 PNMA6FA0A0J9YX94 578 aa13.86□□□□□ -0.19
GPNMB-214ENST00000492858 DENND3A2RUS2 1198 aa13.86□□□□□ -0.19
GPNMB-214ENST00000492858 PI15O43692 258 aa13.86□□□□□ -0.19
GPNMB-214ENST00000492858 WEE2P0C1S8 567 aa13.86□□□□□ -0.19
GPNMB-214ENST00000492858 KCNA2P16389 499 aa13.86□□□□□ -0.19
GPNMB-214ENST00000492858 MTHFRP42898 656 aa13.86□□□□□ -0.19
GPNMB-214ENST00000492858 KRT76Q01546 638 aa13.86□□□□□ -0.19
GPNMB-214ENST00000492858 PLCB3Q01970 1234 aa13.86□□□□□ -0.19
GPNMB-214ENST00000492858 XRRA1Q6P2D8 792 aa13.86□□□□□ -0.19
GPNMB-214ENST00000492858 TMC7Q7Z402 723 aa13.86□□□□□ -0.19
GPNMB-214ENST00000492858 TICAM2Q86XR7 235 aa13.86□□□□□ -0.19
GPNMB-214ENST00000492858 CCDC105Q8IYK2 499 aa13.86□□□□□ -0.19
GPNMB-214ENST00000492858 KIAA2013Q8IYS2 634 aa13.86□□□□□ -0.19
GPNMB-214ENST00000492858 ZDHHC14Q8IZN3 488 aa13.86□□□□□ -0.19
GPNMB-214ENST00000492858 TRAPPC12Q8WVT3 735 aa13.86□□□□□ -0.19
GPNMB-214ENST00000492858 ADAM2Q99965 735 aa13.86□□□□□ -0.19
GPNMB-214ENST00000492858 KRT23Q9C075 422 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms