RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-219ENST00000492602 TMEM87AQ8NBN3 555 aa6.35□□□□□ -1.39
SEC13-219ENST00000492602 CLEC4DQ8WXI8 215 aa6.35□□□□□ -1.39
SEC13-219ENST00000492602 GMCL1Q96IK5 515 aa6.35□□□□□ -1.39
SEC13-219ENST00000492602 SPATA33Q96N06 139 aa6.35□□□□□ -1.39
SEC13-219ENST00000492602 C16orf70Q9BSU1 422 aa6.35□□□□□ -1.39
SEC13-219ENST00000492602 SCNM1Q9BWG6 230 aa6.35□□□□□ -1.39
SEC13-219ENST00000492602 FTHL17Q9BXU8 183 aa6.35□□□□□ -1.39
SEC13-219ENST00000492602 TUT1Q9H6E5 874 aaKnown RBP6.35□□□□□ -1.39
SEC13-219ENST00000492602 RXFP3Q9NSD7 469 aa6.35□□□□□ -1.39
SEC13-219ENST00000492602 TYW1Q9NV66 732 aaKnown RBP6.35□□□□□ -1.39
SEC13-219ENST00000492602 SYNPO2Q9UMS6 1093 aa6.35□□□□□ -1.39
SEC13-219ENST00000492602 MTF2Q9Y483 593 aaPredicted RBP6.35□□□□□ -1.39
SEC13-219ENST00000492602 SUPT16HQ9Y5B9 1047 aaKnown RBP6.35□□□□□ -1.39
SEC13-219ENST00000492602 COL4A3Q01955 1670 aa6.35□□□□□ -1.39
SEC13-219ENST00000492602 FRMPD2Q68DX3 1309 aaPredicted RBP6.34□□□□□ -1.39
SEC13-219ENST00000492602 PNMA6EA0A0J9YXQ4 647 aa6.34□□□□□ -1.39
SEC13-219ENST00000492602 TCRBV5S4A2TA0A5A2 114 aa6.34□□□□□ -1.39
SEC13-219ENST00000492602 FAM170BA6NMN3 283 aa6.34□□□□□ -1.39
SEC13-219ENST00000492602 PLA2G6O60733 806 aa6.34□□□□□ -1.39
SEC13-219ENST00000492602 PRDM1O75626 825 aa6.34□□□□□ -1.39
SEC13-219ENST00000492602 EPCAMP16422 314 aa6.34□□□□□ -1.39
SEC13-219ENST00000492602 LAG3P18627 525 aa6.34□□□□□ -1.39
SEC13-219ENST00000492602 ARHGAP4P98171 946 aa6.34□□□□□ -1.39
SEC13-219ENST00000492602 ATP8B2P98198 1209 aa6.34□□□□□ -1.39
SEC13-219ENST00000492602 MGAT3Q09327 533 aa6.34□□□□□ -1.39
SEC13-219ENST00000492602 ZNF252P-AS1Q0IIN9 211 aa6.34□□□□□ -1.39
SEC13-219ENST00000492602 C19orf57Q0VDD7 668 aa6.34□□□□□ -1.39
SEC13-219ENST00000492602 SNW1Q13573 536 aaKnown RBP6.34□□□□□ -1.39
SEC13-219ENST00000492602 STXBP2Q15833 593 aa6.34□□□□□ -1.39
SEC13-219ENST00000492602 COL28A1Q2UY09 1125 aa6.34□□□□□ -1.39
SEC13-219ENST00000492602 SLFNL1Q499Z3 407 aa6.34□□□□□ -1.39
SEC13-219ENST00000492602 FBXO47Q5MNV8 452 aa6.34□□□□□ -1.39
SEC13-219ENST00000492602 RCSD1Q6JBY9 416 aa6.34□□□□□ -1.39
SEC13-219ENST00000492602 TSHZ1Q6ZSZ6 1077 aa6.34□□□□□ -1.39
SEC13-219ENST00000492602 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.34□□□□□ -1.39
SEC13-219ENST00000492602 C12orf50Q8NA57 414 aaPredicted RBP6.34□□□□□ -1.39
SEC13-219ENST00000492602 GLIS3Q8NEA6 775 aa6.34□□□□□ -1.39
SEC13-219ENST00000492602 LSM14BQ9BX40 385 aaKnown RBP6.34□□□□□ -1.39
SEC13-219ENST00000492602 FAM126AQ9BYI3 521 aaPredicted RBP6.34□□□□□ -1.39
SEC13-219ENST00000492602 RANBP17Q9H2T7 1088 aaKnown RBP6.34□□□□□ -1.39
SEC13-219ENST00000492602 AGO3Q9H9G7 860 aaKnown RBP6.34□□□□□ -1.39
SEC13-219ENST00000492602 ARPP21Q9UBL0 812 aaPredicted RBP6.34□□□□□ -1.39
SEC13-219ENST00000492602 WASF3Q9UPY6 502 aa6.34□□□□□ -1.39
SEC13-219ENST00000492602 MTMR7Q9Y216 660 aa6.34□□□□□ -1.39
SEC13-219ENST00000492602 GPSM3Q9Y4H4 160 aa6.34□□□□□ -1.39
SEC13-219ENST00000492602 PCDHB7Q9Y5E2 793 aa6.34□□□□□ -1.39
SEC13-219ENST00000492602 SLC4A4Q9Y6R1 1079 aa6.34□□□□□ -1.39
SEC13-219ENST00000492602 BAZ2AQ9UIF9 1905 aaKnown RBP6.34□□□□□ -1.39
SEC13-219ENST00000492602 ADAMTS20P59510 1910 aa6.33□□□□□ -1.4
SEC13-219ENST00000492602 GREB1LQ9C091 1923 aaPredicted RBP6.33□□□□□ -1.4
SEC13-219ENST00000492602 MINDY4BA8MYZ0 360 aa6.33□□□□□ -1.4
SEC13-219ENST00000492602 GIPC1O14908 333 aa6.33□□□□□ -1.4
SEC13-219ENST00000492602 N4BP1O75113 896 aaKnown RBP6.33□□□□□ -1.4
SEC13-219ENST00000492602 SEC24BO95487 1268 aa6.33□□□□□ -1.4
SEC13-219ENST00000492602 GNAI3P08754 354 aa6.33□□□□□ -1.4
SEC13-219ENST00000492602 SLC16A2P36021 539 aa6.33□□□□□ -1.4
SEC13-219ENST00000492602 PBX3P40426 434 aa6.33□□□□□ -1.4
SEC13-219ENST00000492602 MAGEA9P43362 315 aa6.33□□□□□ -1.4
SEC13-219ENST00000492602 NOVA1P51513 510 aaKnown RBP6.33□□□□□ -1.4
SEC13-219ENST00000492602 NRLP54845 237 aa6.33□□□□□ -1.4
SEC13-219ENST00000492602 SIM2Q14190 667 aaPredicted RBP6.33□□□□□ -1.4
SEC13-219ENST00000492602 SF3A2Q15428 464 aaKnown RBP6.33□□□□□ -1.4
SEC13-219ENST00000492602 FAM102BQ5T8I3 360 aa6.33□□□□□ -1.4
SEC13-219ENST00000492602 STPG1Q5TH74 334 aa6.33□□□□□ -1.4
SEC13-219ENST00000492602 MYSM1Q5VVJ2 828 aa6.33□□□□□ -1.4
SEC13-219ENST00000492602 RSPH3Q86UC2 560 aa6.33□□□□□ -1.4
SEC13-219ENST00000492602 FAM9BQ8IZU0 186 aa6.33□□□□□ -1.4
SEC13-219ENST00000492602 ST13P5Q8NFI4 369 aaPredicted RBP6.33□□□□□ -1.4
SEC13-219ENST00000492602 BBXQ8WY36 941 aaPredicted RBP6.33□□□□□ -1.4
SEC13-219ENST00000492602 GLG1Q92896 1179 aa6.33□□□□□ -1.4
SEC13-219ENST00000492602 NXPE3Q969Y0 559 aa6.33□□□□□ -1.4
SEC13-219ENST00000492602 EAF2Q96CJ1 260 aaPredicted RBP6.33□□□□□ -1.4
SEC13-219ENST00000492602 CWH43Q9H720 699 aa6.33□□□□□ -1.4
SEC13-219ENST00000492602 SFXN1Q9H9B4 322 aa6.33□□□□□ -1.4
SEC13-219ENST00000492602 CACNA2D2Q9NY47 1150 aa6.33□□□□□ -1.4
SEC13-219ENST00000492602 CDY2AQ9Y6F7 541 aa6.33□□□□□ -1.4
SEC13-219ENST00000492602 DMXL2Q8TDJ6 3036 aa6.33□□□□□ -1.4
SEC13-219ENST00000492602 MYH4Q9Y623 1939 aa6.33□□□□□ -1.4
SEC13-219ENST00000492602 IGSF10Q6WRI0 2623 aa6.32□□□□□ -1.4
SEC13-219ENST00000492602 ZBED9Q6R2W3 1325 aa6.32□□□□□ -1.4
SEC13-219ENST00000492602 NRCAMQ92823 1304 aa6.32□□□□□ -1.4
SEC13-219ENST00000492602 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.32□□□□□ -1.4
SEC13-219ENST00000492602 GOLIM4O00461 696 aa6.32□□□□□ -1.4
SEC13-219ENST00000492602 EIF3JO75822 258 aaKnown RBP6.32□□□□□ -1.4
SEC13-219ENST00000492602 CXCL14O95715 111 aa6.32□□□□□ -1.4
SEC13-219ENST00000492602 GGPS1O95749 300 aa6.32□□□□□ -1.4
SEC13-219ENST00000492602 PRB1P04280 392 aa6.32□□□□□ -1.4
SEC13-219ENST00000492602 LGALS2P05162 132 aa6.32□□□□□ -1.4
SEC13-219ENST00000492602 TSPY3P0CV98 308 aa6.32□□□□□ -1.4
SEC13-219ENST00000492602 TSPY8P0CW00 308 aa6.32□□□□□ -1.4
SEC13-219ENST00000492602 CD72P21854 359 aa6.32□□□□□ -1.4
SEC13-219ENST00000492602 PDE4AP27815 886 aa6.32□□□□□ -1.4
SEC13-219ENST00000492602 SARSP49591 514 aaKnown RBP6.32□□□□□ -1.4
SEC13-219ENST00000492602 GPC5P78333 572 aa6.32□□□□□ -1.4
SEC13-219ENST00000492602 BMS1Q14692 1282 aaKnown RBP6.32□□□□□ -1.4
SEC13-219ENST00000492602 CCDC96Q2M329 555 aa6.32□□□□□ -1.4
SEC13-219ENST00000492602 ZBTB41Q5SVQ8 909 aa6.32□□□□□ -1.4
SEC13-219ENST00000492602 CELF3Q5SZQ8 465 aaKnown RBP6.32□□□□□ -1.4
SEC13-219ENST00000492602 TTBK2Q6IQ55 1244 aa6.32□□□□□ -1.4
SEC13-219ENST00000492602 TAF2Q6P1X5 1199 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms