RNA–Protein interactions for RNA: ENST00000492468.5

PABPC4-216, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 2,257 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-216ENST00000492468 TBC1D1Q86TI0 1168 aaPredicted RBP16.14■□□□□ 0.17
PABPC4-216ENST00000492468 PNMA8AQ86V59 439 aaPredicted RBP16.14■□□□□ 0.17
PABPC4-216ENST00000492468 LRRC27Q9C0I9 530 aa16.14■□□□□ 0.17
PABPC4-216ENST00000492468 NOP53Q9NZM5 478 aaKnown RBP16.14■□□□□ 0.17
PABPC4-216ENST00000492468 NAGPAQ9UK23 515 aa16.14■□□□□ 0.17
PABPC4-216ENST00000492468 TTC7AQ9ULT0 858 aaPredicted RBP16.14■□□□□ 0.17
PABPC4-216ENST00000492468 L3MBTL1Q9Y468 752 aa16.14■□□□□ 0.17
PABPC4-216ENST00000492468 SKAP2O75563 359 aaPredicted RBP16.13■□□□□ 0.17
PABPC4-216ENST00000492468 SHBGP04278 402 aa16.13■□□□□ 0.17
PABPC4-216ENST00000492468 IL6STP40189 918 aaPredicted RBP16.13■□□□□ 0.17
PABPC4-216ENST00000492468 DPY19L2P1Q6NXN4 242 aa16.13■□□□□ 0.17
PABPC4-216ENST00000492468 PEX26Q7Z412 305 aa16.13■□□□□ 0.17
PABPC4-216ENST00000492468 KCNK18Q7Z418 384 aa16.13■□□□□ 0.17
PABPC4-216ENST00000492468 LMBR1Q8WVP7 490 aa16.13■□□□□ 0.17
PABPC4-216ENST00000492468 DNAJC19Q96DA6 116 aa16.13■□□□□ 0.17
PABPC4-216ENST00000492468 CDK5RAP3Q96JB5 506 aa16.13■□□□□ 0.17
PABPC4-216ENST00000492468 ZNF570Q96NI8 536 aa16.13■□□□□ 0.17
PABPC4-216ENST00000492468 TRIM51Q9BSJ1 452 aa16.13■□□□□ 0.17
PABPC4-216ENST00000492468 ZDHHC18Q9NUE0 388 aa16.13■□□□□ 0.17
PABPC4-216ENST00000492468 SAMD15Q9P1V8 674 aa16.13■□□□□ 0.17
PABPC4-216ENST00000492468 NT5C2P49902 561 aa16.12■□□□□ 0.17
PABPC4-216ENST00000492468 NCALDP61601 193 aa16.12■□□□□ 0.17
PABPC4-216ENST00000492468 ZC3H3Q8IXZ2 948 aaKnown RBP16.12■□□□□ 0.17
PABPC4-216ENST00000492468 TBCKQ8TEA7 893 aa16.12■□□□□ 0.17
PABPC4-216ENST00000492468 HES6Q96HZ4 224 aa16.12■□□□□ 0.17
PABPC4-216ENST00000492468 SPAG5Q96R06 1193 aa16.12■□□□□ 0.17
PABPC4-216ENST00000492468 SELENOSQ9BQE4 189 aa16.12■□□□□ 0.17
PABPC4-216ENST00000492468 PRDM11Q9NQV5 511 aa16.12■□□□□ 0.17
PABPC4-216ENST00000492468 PANK4Q9NVE7 773 aa16.12■□□□□ 0.17
PABPC4-216ENST00000492468 A0A0A6YYK5 440 aaPredicted RBP16.12■□□□□ 0.17
PABPC4-216ENST00000492468 NQO1P15559 274 aaKnown RBP16.12■□□□□ 0.17
PABPC4-216ENST00000492468 MECOMQ03112 1051 aa16.12■□□□□ 0.17
PABPC4-216ENST00000492468 ICA1Q05084 483 aa16.12■□□□□ 0.17
PABPC4-216ENST00000492468 NT5DC3Q86UY8 548 aa16.12■□□□□ 0.17
PABPC4-216ENST00000492468 ACSBG1Q96GR2 724 aa16.12■□□□□ 0.17
PABPC4-216ENST00000492468 LZTS2Q9BRK4 669 aa16.12■□□□□ 0.17
PABPC4-216ENST00000492468 MTFR1LQ9H019 292 aa16.12■□□□□ 0.17
PABPC4-216ENST00000492468 RAB17Q9H0T7 212 aa16.12■□□□□ 0.17
PABPC4-216ENST00000492468 PABPC3Q9H361 631 aaKnown RBP16.12■□□□□ 0.17
PABPC4-216ENST00000492468 KANSL2Q9H9L4 492 aa16.12■□□□□ 0.17
PABPC4-216ENST00000492468 C6orf50Q9HD87 102 aa16.12■□□□□ 0.17
PABPC4-216ENST00000492468 ABCF3Q9NUQ8 709 aa16.12■□□□□ 0.17
PABPC4-216ENST00000492468 BZW2Q9Y6E2 419 aaKnown RBP16.12■□□□□ 0.17
PABPC4-216ENST00000492468 SMCO2A6NFE2 343 aa16.11■□□□□ 0.17
PABPC4-216ENST00000492468 OAS1P00973 400 aaKnown RBP16.11■□□□□ 0.17
PABPC4-216ENST00000492468 ANXA13P27216 316 aa16.11■□□□□ 0.17
PABPC4-216ENST00000492468 GNA11P29992 359 aa16.11■□□□□ 0.17
PABPC4-216ENST00000492468 PRKCIP41743 596 aa16.11■□□□□ 0.17
PABPC4-216ENST00000492468 SEPT2Q15019 361 aa16.11■□□□□ 0.17
PABPC4-216ENST00000492468 CALCRLQ16602 461 aa16.11■□□□□ 0.17
PABPC4-216ENST00000492468 FAM133BQ5BKY9 247 aaKnown RBP16.11■□□□□ 0.17
PABPC4-216ENST00000492468 FAM26FQ5R3K3 315 aa16.11■□□□□ 0.17
PABPC4-216ENST00000492468 DUPD1Q68J44 220 aa16.11■□□□□ 0.17
PABPC4-216ENST00000492468 ALKBH5Q6P6C2 394 aaKnown RBP16.11■□□□□ 0.17
PABPC4-216ENST00000492468 ARMC2Q8NEN0 867 aa16.11■□□□□ 0.17
PABPC4-216ENST00000492468 NEK9Q8TD19 979 aa16.11■□□□□ 0.17
PABPC4-216ENST00000492468 ZNF483Q8TF39 744 aaPredicted RBP16.11■□□□□ 0.17
PABPC4-216ENST00000492468 CNKSR1Q969H4 720 aa16.11■□□□□ 0.17
PABPC4-216ENST00000492468 ELAC2Q9BQ52 826 aaKnown RBP16.11■□□□□ 0.17
PABPC4-216ENST00000492468 SPZ1Q9BXG8 430 aa16.11■□□□□ 0.17
PABPC4-216ENST00000492468 DCCP43146 1447 aa16.11■□□□□ 0.17
PABPC4-216ENST00000492468 WTIPA6NIX2 430 aaPredicted RBP16.11■□□□□ 0.17
PABPC4-216ENST00000492468 SMNDC1O75940 238 aaKnown RBP eCLIP16.11■□□□□ 0.175e-7■■■■□ 26.5
PABPC4-216ENST00000492468 RARAP10276 462 aa16.11■□□□□ 0.17
PABPC4-216ENST00000492468 ATF3P18847 181 aa16.11■□□□□ 0.17
PABPC4-216ENST00000492468 NPEPPSP55786 919 aa16.11■□□□□ 0.17
PABPC4-216ENST00000492468 PTENP60484 403 aa16.11■□□□□ 0.17
PABPC4-216ENST00000492468 KCNJ2P63252 427 aa16.11■□□□□ 0.17
PABPC4-216ENST00000492468 UBE4AQ14139 1066 aa16.11■□□□□ 0.17
PABPC4-216ENST00000492468 DNAAF5Q86Y56 855 aa16.11■□□□□ 0.17
PABPC4-216ENST00000492468 SYCE1Q8N0S2 351 aa16.11■□□□□ 0.17
PABPC4-216ENST00000492468 NUDT12Q9BQG2 462 aa16.11■□□□□ 0.17
PABPC4-216ENST00000492468 FGFBP2Q9BYJ0 223 aa16.11■□□□□ 0.17
PABPC4-216ENST00000492468 POTEMA6NI47 508 aa16.1■□□□□ 0.17
PABPC4-216ENST00000492468 CCDC169A6NNP5 214 aa16.1■□□□□ 0.17
PABPC4-216ENST00000492468 UBOX5O94941 541 aa16.1■□□□□ 0.17
PABPC4-216ENST00000492468 GCKP35557 465 aa16.1■□□□□ 0.17
PABPC4-216ENST00000492468 ALDH5A1P51649 535 aaPredicted RBP16.1■□□□□ 0.17
PABPC4-216ENST00000492468 KLRC3Q07444 240 aa16.1■□□□□ 0.17
PABPC4-216ENST00000492468 TMEM266Q2M3C6 531 aa16.1■□□□□ 0.17
PABPC4-216ENST00000492468 GALNTL6Q49A17 601 aa16.1■□□□□ 0.17
PABPC4-216ENST00000492468 SNX29Q8TEQ0 813 aa16.1■□□□□ 0.17
PABPC4-216ENST00000492468 RNF25Q96BH1 459 aaPredicted RBP16.1■□□□□ 0.17
PABPC4-216ENST00000492468 SPDL1Q96EA4 605 aa16.1■□□□□ 0.17
PABPC4-216ENST00000492468 NSRP1Q9H0G5 558 aaKnown RBP16.1■□□□□ 0.17
PABPC4-216ENST00000492468 INTS9Q9NV88 658 aaKnown RBP16.1■□□□□ 0.17
PABPC4-216ENST00000492468 SLC5A4Q9NY91 659 aa16.1■□□□□ 0.17
PABPC4-216ENST00000492468 ROBO3Q96MS0 1386 aa16.1■□□□□ 0.17
PABPC4-216ENST00000492468 LIN7AO14910 233 aaPredicted RBP16.1■□□□□ 0.17
PABPC4-216ENST00000492468 AGTP01019 485 aa16.1■□□□□ 0.17
PABPC4-216ENST00000492468 CCND1P24385 295 aa16.1■□□□□ 0.17
PABPC4-216ENST00000492468 ZNF131P52739 623 aa16.1■□□□□ 0.17
PABPC4-216ENST00000492468 PMS2P54278 862 aa16.1■□□□□ 0.17
PABPC4-216ENST00000492468 COL23A1Q86Y22 540 aaPredicted RBP16.1■□□□□ 0.17
PABPC4-216ENST00000492468 PRMT1Q99873 361 aaKnown RBP16.1■□□□□ 0.17
PABPC4-216ENST00000492468 TRIM31Q9BZY9 425 aa16.1■□□□□ 0.17
PABPC4-216ENST00000492468 AZI2Q9H6S1 392 aa16.1■□□□□ 0.17
PABPC4-216ENST00000492468 INTUQ9ULD6 942 aa16.1■□□□□ 0.17
PABPC4-216ENST00000492468 NR2E1Q9Y466 385 aa16.1■□□□□ 0.17
PABPC4-216ENST00000492468 USP17L3A6NCW0 530 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms