RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 ETV3LQ6ZN32 361 aa5.5□□□□□ -1.53
VTA1-204ENST00000491881 USP51Q70EK9 711 aa5.5□□□□□ -1.53
VTA1-204ENST00000491881 OVCH1Q7RTY7 1134 aa5.5□□□□□ -1.53
VTA1-204ENST00000491881 KRT26Q7Z3Y9 468 aa5.5□□□□□ -1.53
VTA1-204ENST00000491881 RNF180Q86T96 592 aa5.5□□□□□ -1.53
VTA1-204ENST00000491881 OSTM1Q86WC4 334 aa5.5□□□□□ -1.53
VTA1-204ENST00000491881 PTRH1Q86Y79 214 aaKnown RBP5.5□□□□□ -1.53
VTA1-204ENST00000491881 NLGN4XQ8N0W4 816 aa5.5□□□□□ -1.53
VTA1-204ENST00000491881 Q8N1X5 172 aa5.5□□□□□ -1.53
VTA1-204ENST00000491881 UBR7Q8N806 425 aa5.5□□□□□ -1.53
VTA1-204ENST00000491881 CHST14Q8NCH0 376 aa5.5□□□□□ -1.53
VTA1-204ENST00000491881 UHMK1Q8TAS1 419 aaKnown RBP5.5□□□□□ -1.53
VTA1-204ENST00000491881 PHOSPHO1Q8TCT1 267 aa5.5□□□□□ -1.53
VTA1-204ENST00000491881 SYT3Q9BQG1 590 aa5.5□□□□□ -1.53
VTA1-204ENST00000491881 YIPF4Q9BSR8 244 aa5.5□□□□□ -1.53
VTA1-204ENST00000491881 MENTQ9BUN1 341 aa5.5□□□□□ -1.53
VTA1-204ENST00000491881 SMOC1Q9H4F8 434 aa5.5□□□□□ -1.53
VTA1-204ENST00000491881 TSC22D4Q9Y3Q8 395 aa5.5□□□□□ -1.53
VTA1-204ENST00000491881 ZNF561-AS1K7EIQ3 104 aa5.49□□□□□ -1.53
VTA1-204ENST00000491881 CBX4O00257 560 aa5.49□□□□□ -1.53
VTA1-204ENST00000491881 SLC27A2O14975 620 aa5.49□□□□□ -1.53
VTA1-204ENST00000491881 SGSM2O43147 1006 aa5.49□□□□□ -1.53
VTA1-204ENST00000491881 GAS7O60861 476 aa5.49□□□□□ -1.53
VTA1-204ENST00000491881 SCNN1BP51168 640 aa5.49□□□□□ -1.53
VTA1-204ENST00000491881 JAM2P57087 298 aa5.49□□□□□ -1.53
VTA1-204ENST00000491881 LACTBP83111 547 aaPredicted RBP5.49□□□□□ -1.53
VTA1-204ENST00000491881 PCBP1Q15365 356 aaKnown RBP eCLIP5.49□□□□□ -1.53
VTA1-204ENST00000491881 FIGNQ5HY92 759 aa5.49□□□□□ -1.53
VTA1-204ENST00000491881 HABP4Q5JVS0 413 aaKnown RBP5.49□□□□□ -1.53
VTA1-204ENST00000491881 CD300LDQ6UXZ3 194 aa5.49□□□□□ -1.53
VTA1-204ENST00000491881 DDX46Q7L014 1031 aaKnown RBP5.49□□□□□ -1.53
VTA1-204ENST00000491881 TRIM48Q8IWZ4 208 aa5.49□□□□□ -1.53
VTA1-204ENST00000491881 TTLL6Q8N841 843 aa5.49□□□□□ -1.53
VTA1-204ENST00000491881 TXNDC5Q8NBS9 432 aaKnown RBP5.49□□□□□ -1.53
VTA1-204ENST00000491881 OR2W6PQ8NHA6 318 aa5.49□□□□□ -1.53
VTA1-204ENST00000491881 CD244Q9BZW8 370 aa5.49□□□□□ -1.53
VTA1-204ENST00000491881 ZKSCAN5Q9Y2L8 839 aa5.49□□□□□ -1.53
VTA1-204ENST00000491881 COL4A3BPQ9Y5P4 624 aa5.49□□□□□ -1.53
VTA1-204ENST00000491881 SLC12A8A0AV02 714 aa5.48□□□□□ -1.53
VTA1-204ENST00000491881 FAM83GA6ND36 823 aa5.48□□□□□ -1.53
VTA1-204ENST00000491881 KCNK3O14649 394 aa5.48□□□□□ -1.53
VTA1-204ENST00000491881 FZD7O75084 574 aa5.48□□□□□ -1.53
VTA1-204ENST00000491881 HIP1RO75146 1068 aa5.48□□□□□ -1.53
VTA1-204ENST00000491881 TADA3O75528 432 aa5.48□□□□□ -1.53
VTA1-204ENST00000491881 KRT37O76014 449 aa5.48□□□□□ -1.53
VTA1-204ENST00000491881 CPEP16870 476 aa5.48□□□□□ -1.53
VTA1-204ENST00000491881 ACVRL1P37023 503 aa5.48□□□□□ -1.53
VTA1-204ENST00000491881 SURF1Q15526 300 aa5.48□□□□□ -1.53
VTA1-204ENST00000491881 PTPROQ16827 1216 aa5.48□□□□□ -1.53
VTA1-204ENST00000491881 ARHGAP44Q17R89 818 aa5.48□□□□□ -1.53
VTA1-204ENST00000491881 CRIP3Q6Q6R5 217 aa5.48□□□□□ -1.53
VTA1-204ENST00000491881 KCTD1Q719H9 257 aa5.48□□□□□ -1.53
VTA1-204ENST00000491881 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.48□□□□□ -1.53
VTA1-204ENST00000491881 STK32CQ86UX6 486 aa5.48□□□□□ -1.53
VTA1-204ENST00000491881 ZC3H18Q86VM9 953 aaKnown RBP5.48□□□□□ -1.53
VTA1-204ENST00000491881 KIF18BQ86Y91 864 aa5.48□□□□□ -1.53
VTA1-204ENST00000491881 CDK5RAP1Q96SZ6 601 aaKnown RBP5.48□□□□□ -1.53
VTA1-204ENST00000491881 MTFR1LQ9H019 292 aa5.48□□□□□ -1.53
VTA1-204ENST00000491881 SMURF1Q9HCE7 757 aa5.48□□□□□ -1.53
VTA1-204ENST00000491881 SRPK3Q9UPE1 567 aa5.48□□□□□ -1.53
VTA1-204ENST00000491881 ATP23Q9Y6H3 246 aa5.48□□□□□ -1.53
VTA1-204ENST00000491881 TCRBV5S4A2TA0A5A2 114 aa5.47□□□□□ -1.53
VTA1-204ENST00000491881 PTPDC1A2A3K4 754 aa5.47□□□□□ -1.53
VTA1-204ENST00000491881 TRAF5O00463 557 aa5.47□□□□□ -1.53
VTA1-204ENST00000491881 DDX3XO00571 662 aaKnown RBP eCLIP5.47□□□□□ -1.53
VTA1-204ENST00000491881 MAN2B1O00754 1011 aa5.47□□□□□ -1.53
VTA1-204ENST00000491881 LAMTOR5O43504 91 aa5.47□□□□□ -1.53
VTA1-204ENST00000491881 AMY2AP04746 511 aa5.47□□□□□ -1.53
VTA1-204ENST00000491881 AMY2BP19961 511 aa5.47□□□□□ -1.53
VTA1-204ENST00000491881 IL2P60568 153 aa5.47□□□□□ -1.53
VTA1-204ENST00000491881 IRF9Q00978 393 aa5.47□□□□□ -1.53
VTA1-204ENST00000491881 STRN3Q13033 797 aa5.47□□□□□ -1.53
VTA1-204ENST00000491881 TUSC3Q13454 348 aa5.47□□□□□ -1.53
VTA1-204ENST00000491881 SEPT7Q16181 437 aaKnown RBP5.47□□□□□ -1.53
VTA1-204ENST00000491881 PLEKHH3Q7Z736 793 aa5.47□□□□□ -1.53
VTA1-204ENST00000491881 RBM12BQ8IXT5 1001 aaKnown RBP5.47□□□□□ -1.53
VTA1-204ENST00000491881 FAM26EQ8N5C1 309 aa5.47□□□□□ -1.53
VTA1-204ENST00000491881 USP7Q93009 1102 aa5.47□□□□□ -1.53
VTA1-204ENST00000491881 LCORQ96JN0 433 aaPredicted RBP5.47□□□□□ -1.53
VTA1-204ENST00000491881 ORAI3Q9BRQ5 295 aa5.47□□□□□ -1.53
VTA1-204ENST00000491881 BOCQ9BWV1 1114 aa5.47□□□□□ -1.53
VTA1-204ENST00000491881 KLC2Q9H0B6 622 aa5.47□□□□□ -1.53
VTA1-204ENST00000491881 VPS11Q9H270 941 aa5.47□□□□□ -1.53
VTA1-204ENST00000491881 SLITRK6Q9H5Y7 841 aa5.47□□□□□ -1.53
VTA1-204ENST00000491881 ASH2LQ9UBL3 628 aa5.47□□□□□ -1.53
VTA1-204ENST00000491881 B4GALT6Q9UBX8 382 aa5.47□□□□□ -1.53
VTA1-204ENST00000491881 hCG_2014768A0A024R1R8 64 aa5.46□□□□□ -1.54
VTA1-204ENST00000491881 TCRBV5S2A0A599 114 aa5.46□□□□□ -1.54
VTA1-204ENST00000491881 ZNF891A8MT65 544 aaPredicted RBP5.46□□□□□ -1.54
VTA1-204ENST00000491881 SCDO00767 359 aa5.46□□□□□ -1.54
VTA1-204ENST00000491881 F2P00734 622 aa5.46□□□□□ -1.54
VTA1-204ENST00000491881 GJA4P35212 333 aa5.46□□□□□ -1.54
VTA1-204ENST00000491881 MECP2P51608 486 aaKnown RBP5.46□□□□□ -1.54
VTA1-204ENST00000491881 ITGA1P56199 1179 aa5.46□□□□□ -1.54
VTA1-204ENST00000491881 OCRLQ01968 901 aa5.46□□□□□ -1.54
VTA1-204ENST00000491881 ICAM4Q14773 271 aa5.46□□□□□ -1.54
VTA1-204ENST00000491881 DHCR24Q15392 516 aa5.46□□□□□ -1.54
VTA1-204ENST00000491881 CDSNQ15517 529 aa5.46□□□□□ -1.54
VTA1-204ENST00000491881 NXPE1Q8N323 547 aa5.46□□□□□ -1.54
VTA1-204ENST00000491881 ARRDC4Q8NCT1 418 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms