RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 TINF2Q9BSI4 451 aa25.27■■□□□ 1.64
USF3-203ENST00000491165 ZNF577Q9BSK1 485 aa25.27■■□□□ 1.64
USF3-203ENST00000491165 AGO4Q9HCK5 861 aaKnown RBP25.27■■□□□ 1.64
USF3-203ENST00000491165 PDGFCQ9NRA1 345 aa25.27■■□□□ 1.64
USF3-203ENST00000491165 IPO5O00410 1097 aaKnown RBP25.27■■□□□ 1.64
USF3-203ENST00000491165 CD44P16070 742 aaKnown RBP25.27■■□□□ 1.64
USF3-203ENST00000491165 DPYDQ12882 1025 aa25.27■■□□□ 1.64
USF3-203ENST00000491165 TMCO3Q6UWJ1 677 aa25.27■■□□□ 1.64
USF3-203ENST00000491165 DTHD1Q6ZMT9 781 aa25.27■■□□□ 1.64
USF3-203ENST00000491165 SLC5A5Q92911 643 aa25.27■■□□□ 1.64
USF3-203ENST00000491165 CTAGE1Q96RT6 745 aa25.27■■□□□ 1.64
USF3-203ENST00000491165 CASP8AP2Q9UKL3 1982 aa25.26■■□□□ 1.63
USF3-203ENST00000491165 ASB14A6NK59 587 aa25.26■■□□□ 1.63
USF3-203ENST00000491165 DHX15O43143 795 aaKnown RBP25.26■■□□□ 1.63
USF3-203ENST00000491165 ARIH2O95376 493 aa25.26■■□□□ 1.63
USF3-203ENST00000491165 IGHA2P01877 340 aa25.26■■□□□ 1.63
USF3-203ENST00000491165 RGS2P41220 211 aa25.26■■□□□ 1.63
USF3-203ENST00000491165 GPRASP2Q96D09 838 aa25.26■■□□□ 1.63
USF3-203ENST00000491165 APBA2Q99767 749 aa25.26■■□□□ 1.63
USF3-203ENST00000491165 TELO2Q9Y4R8 837 aa25.26■■□□□ 1.63
USF3-203ENST00000491165 TBX3O15119 743 aa25.25■■□□□ 1.63
USF3-203ENST00000491165 TEX33O43247 280 aa25.25■■□□□ 1.63
USF3-203ENST00000491165 PSMD10O75832 226 aa25.25■■□□□ 1.63
USF3-203ENST00000491165 STAM2O75886 525 aa25.25■■□□□ 1.63
USF3-203ENST00000491165 CDKAL1Q5VV42 579 aa25.25■■□□□ 1.63
USF3-203ENST00000491165 PPFIBP1Q86W92 1011 aa25.25■■□□□ 1.63
USF3-203ENST00000491165 IGSF22Q8N9C0 903 aa25.25■■□□□ 1.63
USF3-203ENST00000491165 BEGAINQ9BUH8 593 aa25.25■■□□□ 1.63
USF3-203ENST00000491165 NAA15Q9BXJ9 866 aaKnown RBP25.25■■□□□ 1.63
USF3-203ENST00000491165 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.25■■□□□ 1.63
USF3-203ENST00000491165 VAV3Q9UKW4 847 aa25.25■■□□□ 1.63
USF3-203ENST00000491165 PCDHA12Q9UN75 941 aa25.25■■□□□ 1.63
USF3-203ENST00000491165 MRFAP1Q9Y605 127 aa25.25■■□□□ 1.63
USF3-203ENST00000491165 CCDC175P0C221 793 aa25.25■■□□□ 1.63
USF3-203ENST00000491165 PNMA6AP0CW24 399 aaPredicted RBP25.25■■□□□ 1.63
USF3-203ENST00000491165 KIF22Q14807 665 aa25.25■■□□□ 1.63
USF3-203ENST00000491165 DESI2Q9BSY9 194 aa25.25■■□□□ 1.63
USF3-203ENST00000491165 SPATA31C2B4DYI2 1134 aa25.24■■□□□ 1.63
USF3-203ENST00000491165 FKTNO75072 461 aa25.24■■□□□ 1.63
USF3-203ENST00000491165 KCNA2P16389 499 aa25.24■■□□□ 1.63
USF3-203ENST00000491165 CASP1P29466 404 aa25.24■■□□□ 1.63
USF3-203ENST00000491165 CYP2C19P33261 490 aa25.24■■□□□ 1.63
USF3-203ENST00000491165 STX17P56962 302 aa25.24■■□□□ 1.63
USF3-203ENST00000491165 FAM20AQ96MK3 541 aa25.24■■□□□ 1.63
USF3-203ENST00000491165 LOC102724159A0A0B4J2E5 919 aa25.24■■□□□ 1.63
USF3-203ENST00000491165 DDX39AO00148 427 aaKnown RBP25.24■■□□□ 1.63
USF3-203ENST00000491165 SORBS3O60504 671 aa25.24■■□□□ 1.63
USF3-203ENST00000491165 ZRANB2O95218 330 aaKnown RBP eCLIP25.24■■□□□ 1.63
USF3-203ENST00000491165 FXR2P51116 673 aaKnown RBP eCLIP25.24■■□□□ 1.63
USF3-203ENST00000491165 PWP2Q15269 919 aaKnown RBP25.24■■□□□ 1.63
USF3-203ENST00000491165 FILIP1LQ4L180 1135 aa25.24■■□□□ 1.63
USF3-203ENST00000491165 PRAMEF19Q5SWL8 479 aa25.24■■□□□ 1.63
USF3-203ENST00000491165 LRCH2Q5VUJ6 765 aa25.24■■□□□ 1.63
USF3-203ENST00000491165 TAPT1Q6NXT6 567 aa25.24■■□□□ 1.63
USF3-203ENST00000491165 MARCH6O60337 910 aa25.23■■□□□ 1.63
USF3-203ENST00000491165 PBX1P40424 430 aa25.23■■□□□ 1.63
USF3-203ENST00000491165 PPP2R3AQ06190 1150 aa25.23■■□□□ 1.63
USF3-203ENST00000491165 GNPTABQ3T906 1256 aa25.23■■□□□ 1.63
USF3-203ENST00000491165 OTOP1Q7RTM1 612 aa25.23■■□□□ 1.63
USF3-203ENST00000491165 NLRX1Q86UT6 975 aa25.23■■□□□ 1.63
USF3-203ENST00000491165 SLFN12Q8IYM2 578 aa25.23■■□□□ 1.63
USF3-203ENST00000491165 TRIB2Q92519 343 aa25.23■■□□□ 1.63
USF3-203ENST00000491165 SLC5A4Q9NY91 659 aa25.23■■□□□ 1.63
USF3-203ENST00000491165 SYNGAP1Q96PV0 1343 aa25.22■■□□□ 1.63
USF3-203ENST00000491165 PPP1R3GB7ZBB8 358 aa25.22■■□□□ 1.63
USF3-203ENST00000491165 ICAM3P32942 547 aa25.22■■□□□ 1.63
USF3-203ENST00000491165 LY6KQ17RY6 165 aa25.22■■□□□ 1.63
USF3-203ENST00000491165 SOWAHDA6NJG2 315 aa25.22■■□□□ 1.63
USF3-203ENST00000491165 RBL2Q08999 1139 aa25.22■■□□□ 1.63
USF3-203ENST00000491165 MTF1Q14872 753 aa25.22■■□□□ 1.63
USF3-203ENST00000491165 KARSQ15046 597 aaKnown RBP25.22■■□□□ 1.63
USF3-203ENST00000491165 B3GNT9Q6UX72 402 aa25.22■■□□□ 1.63
USF3-203ENST00000491165 MPHOSPH6Q99547 160 aaKnown RBP25.22■■□□□ 1.63
USF3-203ENST00000491165 SRRDQ9UH36 339 aa25.22■■□□□ 1.63
USF3-203ENST00000491165 B4DLN1 442 aa25.21■■□□□ 1.63
USF3-203ENST00000491165 EML1O00423 815 aa25.21■■□□□ 1.63
USF3-203ENST00000491165 ADCY6O43306 1168 aa25.21■■□□□ 1.63
USF3-203ENST00000491165 FAM193AP78312 1265 aa25.21■■□□□ 1.63
USF3-203ENST00000491165 SMYD4Q8IYR2 804 aaPredicted RBP25.21■■□□□ 1.63
USF3-203ENST00000491165 GPR161Q8N6U8 529 aaKnown RBP25.21■■□□□ 1.63
USF3-203ENST00000491165 PYM1Q9BRP8 204 aaKnown RBP25.21■■□□□ 1.63
USF3-203ENST00000491165 MMTAG2Q9BU76 263 aaKnown RBP25.21■■□□□ 1.63
USF3-203ENST00000491165 MRPL44Q9H9J2 332 aaKnown RBP25.21■■□□□ 1.63
USF3-203ENST00000491165 WDR81Q562E7 1941 aa25.21■■□□□ 1.63
USF3-203ENST00000491165 MAFGO15525 162 aa25.21■■□□□ 1.63
USF3-203ENST00000491165 CHMP2AO43633 222 aa25.21■■□□□ 1.63
USF3-203ENST00000491165 GAS7O60861 476 aa25.21■■□□□ 1.63
USF3-203ENST00000491165 XRCC5P13010 732 aaKnown RBP25.21■■□□□ 1.63
USF3-203ENST00000491165 UBA1P22314 1058 aaKnown RBP25.21■■□□□ 1.63
USF3-203ENST00000491165 LONP1P36776 959 aaKnown RBP25.21■■□□□ 1.63
USF3-203ENST00000491165 GJC2Q5T442 439 aaPredicted RBP25.21■■□□□ 1.63
USF3-203ENST00000491165 OLFML2BQ68BL8 750 aa25.21■■□□□ 1.63
USF3-203ENST00000491165 IQUBQ8NA54 791 aa25.21■■□□□ 1.63
USF3-203ENST00000491165 UNC45AQ9H3U1 944 aa25.21■■□□□ 1.63
USF3-203ENST00000491165 ST7Q9NRC1 585 aa25.21■■□□□ 1.63
USF3-203ENST00000491165 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.2■■□□□ 1.62
USF3-203ENST00000491165 TRIM32Q13049 653 aa25.2■■□□□ 1.62
USF3-203ENST00000491165 CCDC62Q6P9F0 684 aa25.2■■□□□ 1.62
USF3-203ENST00000491165 MFAP3LO75121 409 aa25.19■■□□□ 1.62
USF3-203ENST00000491165 CCNE2O96020 404 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms