RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 LMF1Q96S06 567 aa2.6□□□□□ -1.99
SNRNP40-207ENST00000491106 POLR3GLQ9BT43 218 aa2.6□□□□□ -1.99
SNRNP40-207ENST00000491106 SPATA9Q9BWV2 254 aa2.6□□□□□ -1.99
SNRNP40-207ENST00000491106 CD244Q9BZW8 370 aa2.6□□□□□ -1.99
SNRNP40-207ENST00000491106 IPPKQ9H8X2 491 aa2.6□□□□□ -1.99
SNRNP40-207ENST00000491106 SLC39A2Q9NP94 309 aa2.6□□□□□ -1.99
SNRNP40-207ENST00000491106 DLL4Q9NR61 685 aa2.6□□□□□ -1.99
SNRNP40-207ENST00000491106 SRRDQ9UH36 339 aa2.6□□□□□ -1.99
SNRNP40-207ENST00000491106 ZFP69BQ9UJL9 534 aa2.6□□□□□ -1.99
SNRNP40-207ENST00000491106 CNOT11Q9UKZ1 510 aaKnown RBP2.6□□□□□ -1.99
SNRNP40-207ENST00000491106 MYRFQ9Y2G1 1151 aa2.6□□□□□ -1.99
SNRNP40-207ENST00000491106 PCDHA9Q9Y5H5 950 aa2.6□□□□□ -1.99
SNRNP40-207ENST00000491106 SAMD9Q5K651 1589 aa2.6□□□□□ -1.99
SNRNP40-207ENST00000491106 KDM2BQ8NHM5 1336 aa2.6□□□□□ -1.99
SNRNP40-207ENST00000491106 ZNF644Q9H582 1327 aaPredicted RBP2.6□□□□□ -1.99
SNRNP40-207ENST00000491106 LRPPRCP42704 1394 aaKnown RBP2.6□□□□□ -1.99
SNRNP40-207ENST00000491106 ABCC5O15440 1437 aa2.59□□□□□ -1.99
SNRNP40-207ENST00000491106 UHRF1BP1Q6BDS2 1440 aa2.59□□□□□ -1.99
SNRNP40-207ENST00000491106 LRRIQ1Q96JM4 1722 aa2.59□□□□□ -1.99
SNRNP40-207ENST00000491106 EHBP1L1Q8N3D4 1523 aa2.59□□□□□ -1.99
SNRNP40-207ENST00000491106 KIAA0586Q9BVV6 1533 aa2.59□□□□□ -1.99
SNRNP40-207ENST00000491106 KDM5BQ9UGL1 1544 aa2.59□□□□□ -1.99
SNRNP40-207ENST00000491106 PCF11O94913 1555 aaKnown RBP2.59□□□□□ -1.99
SNRNP40-207ENST00000491106 PRAMEF25A6NGN4 478 aa2.59□□□□□ -1.99
SNRNP40-207ENST00000491106 AQP7O14520 342 aa2.59□□□□□ -1.99
SNRNP40-207ENST00000491106 KCNK3O14649 394 aa2.59□□□□□ -1.99
SNRNP40-207ENST00000491106 PDPK1O15530 556 aa2.59□□□□□ -1.99
SNRNP40-207ENST00000491106 B4GALT3O60512 393 aa2.59□□□□□ -1.99
SNRNP40-207ENST00000491106 ZNF623O75123 536 aa2.59□□□□□ -1.99
SNRNP40-207ENST00000491106 FAHP16930 419 aa2.59□□□□□ -1.99
SNRNP40-207ENST00000491106 ZNF20P17024 532 aa2.59□□□□□ -1.99
SNRNP40-207ENST00000491106 NAT1P18440 290 aa2.59□□□□□ -1.99
SNRNP40-207ENST00000491106 ADCY8P40145 1251 aa2.59□□□□□ -1.99
SNRNP40-207ENST00000491106 MEOX1P50221 254 aa2.59□□□□□ -1.99
SNRNP40-207ENST00000491106 KCNQ1P51787 676 aa2.59□□□□□ -1.99
SNRNP40-207ENST00000491106 RRP1P56182 461 aaKnown RBP2.59□□□□□ -1.99
SNRNP40-207ENST00000491106 ADAM17P78536 824 aa2.59□□□□□ -1.99
SNRNP40-207ENST00000491106 CYP4F3Q08477 520 aa2.59□□□□□ -1.99
SNRNP40-207ENST00000491106 EFEMP1Q12805 493 aa2.59□□□□□ -1.99
SNRNP40-207ENST00000491106 RAB33AQ14088 237 aa2.59□□□□□ -1.99
SNRNP40-207ENST00000491106 NRN1LQ496H8 165 aa2.59□□□□□ -1.99
SNRNP40-207ENST00000491106 NAALADL2Q58DX5 795 aa2.59□□□□□ -1.99
SNRNP40-207ENST00000491106 FAM47CQ5HY64 1035 aa2.59□□□□□ -1.99
SNRNP40-207ENST00000491106 FAM209AQ5JX71 171 aa2.59□□□□□ -1.99
SNRNP40-207ENST00000491106 SLFN13Q68D06 897 aa2.59□□□□□ -1.99
SNRNP40-207ENST00000491106 RSPO2Q6UXX9 243 aaPredicted RBP2.59□□□□□ -1.99
SNRNP40-207ENST00000491106 KCTD1Q719H9 257 aa2.59□□□□□ -1.99
SNRNP40-207ENST00000491106 SPRED1Q7Z699 444 aa2.59□□□□□ -1.99
SNRNP40-207ENST00000491106 TAX1BP1Q86VP1 789 aa2.59□□□□□ -1.99
SNRNP40-207ENST00000491106 TRMT2AQ8IZ69 625 aaKnown RBP2.59□□□□□ -1.99
SNRNP40-207ENST00000491106 HIPK4Q8NE63 616 aa2.59□□□□□ -1.99
SNRNP40-207ENST00000491106 ST13P5Q8NFI4 369 aaPredicted RBP2.59□□□□□ -1.99
SNRNP40-207ENST00000491106 NUDT10Q8NFP7 164 aa2.59□□□□□ -1.99
SNRNP40-207ENST00000491106 EXOC6Q8TAG9 804 aa2.59□□□□□ -1.99
SNRNP40-207ENST00000491106 NUDT11Q96G61 164 aa2.59□□□□□ -1.99
SNRNP40-207ENST00000491106 GNRHR2Q96P88 292 aa2.59□□□□□ -1.99
SNRNP40-207ENST00000491106 PTPN18Q99952 460 aa2.59□□□□□ -1.99
SNRNP40-207ENST00000491106 ZFYVE21Q9BQ24 234 aa2.59□□□□□ -1.99
SNRNP40-207ENST00000491106 PANK3Q9H999 370 aa2.59□□□□□ -1.99
SNRNP40-207ENST00000491106 PODXL2Q9NZ53 605 aa2.59□□□□□ -1.99
SNRNP40-207ENST00000491106 CDC42EP3Q9UKI2 254 aa2.59□□□□□ -1.99
SNRNP40-207ENST00000491106 JAG2Q9Y219 1238 aa2.59□□□□□ -1.99
SNRNP40-207ENST00000491106 KNSTRNQ9Y448 316 aa2.59□□□□□ -1.99
SNRNP40-207ENST00000491106 HS3ST3A1Q9Y663 406 aa2.59□□□□□ -1.99
SNRNP40-207ENST00000491106 ATP23Q9Y6H3 246 aa2.59□□□□□ -1.99
SNRNP40-207ENST00000491106 GCC2Q8IWJ2 1684 aa2.59□□□□□ -2
SNRNP40-207ENST00000491106 NUP155O75694 1391 aa2.59□□□□□ -2
SNRNP40-207ENST00000491106 DHX29Q7Z478 1369 aaKnown RBP2.59□□□□□ -2
SNRNP40-207ENST00000491106 DAPK1P53355 1430 aa2.59□□□□□ -2
SNRNP40-207ENST00000491106 KIAA1107Q9UPP5 1409 aa2.59□□□□□ -2
SNRNP40-207ENST00000491106 DENND4BO75064 1496 aaPredicted RBP2.58□□□□□ -2
SNRNP40-207ENST00000491106 HECW1Q76N89 1606 aa2.58□□□□□ -2
SNRNP40-207ENST00000491106 ABCA5Q8WWZ7 1642 aa2.58□□□□□ -2
SNRNP40-207ENST00000491106 KIF21AQ7Z4S6 1674 aa2.58□□□□□ -2
SNRNP40-207ENST00000491106 SCDO00767 359 aa2.58□□□□□ -2
SNRNP40-207ENST00000491106 CDC14BO60729 498 aa2.58□□□□□ -2
SNRNP40-207ENST00000491106 KRT37O76014 449 aa2.58□□□□□ -2
SNRNP40-207ENST00000491106 FGRP09769 529 aa2.58□□□□□ -2
SNRNP40-207ENST00000491106 PYGMP11217 842 aa2.58□□□□□ -2
SNRNP40-207ENST00000491106 FGFR1P11362 822 aa2.58□□□□□ -2
SNRNP40-207ENST00000491106 PDE6AP16499 860 aa2.58□□□□□ -2
SNRNP40-207ENST00000491106 ZNF28P17035 718 aa2.58□□□□□ -2
SNRNP40-207ENST00000491106 HNRNPMP52272 730 aaKnown RBP eCLIP2.58□□□□□ -2
SNRNP40-207ENST00000491106 HMGA2P52926 109 aa2.58□□□□□ -2
SNRNP40-207ENST00000491106 RAC3P60763 192 aa2.58□□□□□ -2
SNRNP40-207ENST00000491106 ZC3H6P61129 1189 aaKnown RBP2.58□□□□□ -2
SNRNP40-207ENST00000491106 NFKB2Q00653 900 aa2.58□□□□□ -2
SNRNP40-207ENST00000491106 HHEXQ03014 270 aa2.58□□□□□ -2
SNRNP40-207ENST00000491106 SLFN5Q08AF3 891 aa2.58□□□□□ -2
SNRNP40-207ENST00000491106 USP10Q14694 798 aaKnown RBP2.58□□□□□ -2
SNRNP40-207ENST00000491106 NOLC1Q14978 699 aaKnown RBP eCLIP2.58□□□□□ -2
SNRNP40-207ENST00000491106 TMEM132BQ14DG7 1078 aa2.58□□□□□ -2
SNRNP40-207ENST00000491106 EMC4Q5J8M3 183 aa2.58□□□□□ -2
SNRNP40-207ENST00000491106 CYP4F22Q6NT55 531 aa2.58□□□□□ -2
SNRNP40-207ENST00000491106 Q6ZUG5 572 aa2.58□□□□□ -2
SNRNP40-207ENST00000491106 SPATC1Q76KD6 591 aa2.58□□□□□ -2
SNRNP40-207ENST00000491106 CENPQQ7L2Z9 268 aaPredicted RBP2.58□□□□□ -2
SNRNP40-207ENST00000491106 SGMS1Q86VZ5 419 aa2.58□□□□□ -2
SNRNP40-207ENST00000491106 PTRH1Q86Y79 214 aaKnown RBP2.58□□□□□ -2
SNRNP40-207ENST00000491106 ZFPM1Q8IX07 1006 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms