RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 SRBD1Q8N5C6 995 aaKnown RBP23.65■■□□□ 1.38
CLIP2-208ENST00000491075 ZBTB10Q96DT7 871 aa23.65■■□□□ 1.38
CLIP2-208ENST00000491075 PCYT2Q99447 389 aa23.65■■□□□ 1.38
CLIP2-208ENST00000491075 SLC9A2Q9UBY0 812 aa23.65■■□□□ 1.38
CLIP2-208ENST00000491075 PCDHA2Q9Y5H9 948 aa23.65■■□□□ 1.38
CLIP2-208ENST00000491075 KDM3AQ9Y4C1 1321 aa23.64■■□□□ 1.38
CLIP2-208ENST00000491075 LOC730098B7Z3J9 87 aa23.64■■□□□ 1.37
CLIP2-208ENST00000491075 SGSM2O43147 1006 aa23.64■■□□□ 1.37
CLIP2-208ENST00000491075 PDE4AP27815 886 aa23.64■■□□□ 1.37
CLIP2-208ENST00000491075 NRIP1P48552 1158 aa23.64■■□□□ 1.37
CLIP2-208ENST00000491075 TMEM62Q0P6H9 643 aa23.64■■□□□ 1.37
CLIP2-208ENST00000491075 PKN1Q16512 942 aa23.64■■□□□ 1.37
CLIP2-208ENST00000491075 NFXL1Q6ZNB6 911 aa23.64■■□□□ 1.37
CLIP2-208ENST00000491075 FAM43BQ6ZT52 329 aaPredicted RBP23.64■■□□□ 1.37
CLIP2-208ENST00000491075 TRIM67Q6ZTA4 783 aa23.64■■□□□ 1.37
CLIP2-208ENST00000491075 TMTC2Q8N394 836 aa23.64■■□□□ 1.37
CLIP2-208ENST00000491075 EXOC6Q8TAG9 804 aa23.64■■□□□ 1.37
CLIP2-208ENST00000491075 CELF4Q9BZC1 486 aaKnown RBP23.64■■□□□ 1.37
CLIP2-208ENST00000491075 LRFN2Q9ULH4 789 aa23.64■■□□□ 1.37
CLIP2-208ENST00000491075 PCDHA6Q9UN73 950 aa23.64■■□□□ 1.37
CLIP2-208ENST00000491075 PCDHA8Q9Y5H6 950 aa23.64■■□□□ 1.37
CLIP2-208ENST00000491075 KMT2EQ8IZD2 1858 aa23.64■■□□□ 1.37
CLIP2-208ENST00000491075 TMEM221A6NGB7 291 aa23.63■■□□□ 1.37
CLIP2-208ENST00000491075 CCDC69A6NI79 296 aa23.63■■□□□ 1.37
CLIP2-208ENST00000491075 M0R296 226 aa23.63■■□□□ 1.37
CLIP2-208ENST00000491075 PRC1O43663 620 aa23.63■■□□□ 1.37
CLIP2-208ENST00000491075 GLP2RO95838 553 aa23.63■■□□□ 1.37
CLIP2-208ENST00000491075 CALM1P0DP23 149 aa23.63■■□□□ 1.37
CLIP2-208ENST00000491075 CALM2P0DP24 149 aa23.63■■□□□ 1.37
CLIP2-208ENST00000491075 CALM3P0DP25 149 aa23.63■■□□□ 1.37
CLIP2-208ENST00000491075 MAP4K1Q92918 833 aa23.63■■□□□ 1.37
CLIP2-208ENST00000491075 PRRX2Q99811 253 aa23.63■■□□□ 1.37
CLIP2-208ENST00000491075 SMIM35A0A1B0GVV1 85 aa23.62■■□□□ 1.37
CLIP2-208ENST00000491075 FSD2A1L4K1 749 aa23.62■■□□□ 1.37
CLIP2-208ENST00000491075 UBE3AQ05086 875 aa23.62■■□□□ 1.37
CLIP2-208ENST00000491075 CBX2Q14781 532 aaPredicted RBP23.62■■□□□ 1.37
CLIP2-208ENST00000491075 PLCB4Q15147 1175 aa23.62■■□□□ 1.37
CLIP2-208ENST00000491075 PLPPR4Q7Z2D5 763 aa23.62■■□□□ 1.37
CLIP2-208ENST00000491075 CMTR1Q8N1G2 835 aaKnown RBP23.62■■□□□ 1.37
CLIP2-208ENST00000491075 NME8Q8N427 588 aa23.62■■□□□ 1.37
CLIP2-208ENST00000491075 TRAPPC12Q8WVT3 735 aa23.62■■□□□ 1.37
CLIP2-208ENST00000491075 PBXIP1Q96AQ6 731 aa23.62■■□□□ 1.37
CLIP2-208ENST00000491075 TMEM87BQ96K49 555 aa23.62■■□□□ 1.37
CLIP2-208ENST00000491075 SDF4Q9BRK5 362 aa23.62■■□□□ 1.37
CLIP2-208ENST00000491075 KCNH7Q9NS40 1196 aa23.62■■□□□ 1.37
CLIP2-208ENST00000491075 RNF216Q9NWF9 866 aaPredicted RBP23.62■■□□□ 1.37
CLIP2-208ENST00000491075 BARX2Q9UMQ3 279 aaPredicted RBP23.62■■□□□ 1.37
CLIP2-208ENST00000491075 USP15Q9Y4E8 981 aaPredicted RBP23.62■■□□□ 1.37
CLIP2-208ENST00000491075 NFASCO94856 1347 aa23.61■■□□□ 1.37
CLIP2-208ENST00000491075 SARSP49591 514 aaKnown RBP23.61■■□□□ 1.37
CLIP2-208ENST00000491075 GATMP50440 423 aa23.61■■□□□ 1.37
CLIP2-208ENST00000491075 PTPN5P54829 565 aa23.61■■□□□ 1.37
CLIP2-208ENST00000491075 ACTR2P61160 394 aa23.61■■□□□ 1.37
CLIP2-208ENST00000491075 KRT76Q01546 638 aa23.61■■□□□ 1.37
CLIP2-208ENST00000491075 RBM23Q86U06 439 aaKnown RBP23.61■■□□□ 1.37
CLIP2-208ENST00000491075 SUGP1Q8IWZ8 645 aaKnown RBP23.61■■□□□ 1.37
CLIP2-208ENST00000491075 TMX1Q9H3N1 280 aa23.61■■□□□ 1.37
CLIP2-208ENST00000491075 TLE6Q9H808 572 aa23.61■■□□□ 1.37
CLIP2-208ENST00000491075 PCDHB12Q9Y5F1 795 aa23.61■■□□□ 1.37
CLIP2-208ENST00000491075 RBM8AQ9Y5S9 174 aaKnown RBP23.61■■□□□ 1.37
CLIP2-208ENST00000491075 SH2B2O14492 632 aaPredicted RBP23.6■■□□□ 1.37
CLIP2-208ENST00000491075 MCM5P33992 734 aa23.6■■□□□ 1.37
CLIP2-208ENST00000491075 SLC26A2P50443 739 aa23.6■■□□□ 1.37
CLIP2-208ENST00000491075 STAT5BP51692 787 aa23.6■■□□□ 1.37
CLIP2-208ENST00000491075 ZXDAP98168 799 aa23.6■■□□□ 1.37
CLIP2-208ENST00000491075 PRSS33Q8NF86 280 aa23.6■■□□□ 1.37
CLIP2-208ENST00000491075 MXRA8Q9BRK3 442 aa23.6■■□□□ 1.37
CLIP2-208ENST00000491075 PHF7Q9BWX1 381 aaPredicted RBP23.6■■□□□ 1.37
CLIP2-208ENST00000491075 AAASQ9NRG9 546 aa23.6■■□□□ 1.37
CLIP2-208ENST00000491075 PCDHB7Q9Y5E2 793 aa23.6■■□□□ 1.37
CLIP2-208ENST00000491075 RXRAP19793 462 aa23.59■■□□□ 1.37
CLIP2-208ENST00000491075 LIFRP42702 1097 aa23.59■■□□□ 1.37
CLIP2-208ENST00000491075 MTHFD1LQ6UB35 978 aa23.59■■□□□ 1.37
CLIP2-208ENST00000491075 HEATR3Q7Z4Q2 680 aa23.59■■□□□ 1.37
CLIP2-208ENST00000491075 TLR9Q9NR96 1032 aa23.59■■□□□ 1.37
CLIP2-208ENST00000491075 PCDHGC5Q9Y5F6 944 aa23.59■■□□□ 1.37
CLIP2-208ENST00000491075 EVPLQ92817 2033 aa23.59■■□□□ 1.37
CLIP2-208ENST00000491075 hCG_1642624A0A1W2PR95 340 aa23.58■■□□□ 1.37
CLIP2-208ENST00000491075 PPFIA3O75145 1194 aa23.58■■□□□ 1.37
CLIP2-208ENST00000491075 ATF7P17544 494 aaPredicted RBP23.58■■□□□ 1.37
CLIP2-208ENST00000491075 NFX1Q12986 1120 aaKnown RBP23.58■■□□□ 1.37
CLIP2-208ENST00000491075 TMEM266Q2M3C6 531 aa23.58■■□□□ 1.37
CLIP2-208ENST00000491075 ODR4Q5SWX8 454 aa23.58■■□□□ 1.37
CLIP2-208ENST00000491075 SPOUT1Q5T280 376 aaKnown RBP23.58■■□□□ 1.37
CLIP2-208ENST00000491075 TMTC3Q6ZXV5 915 aa23.58■■□□□ 1.37
CLIP2-208ENST00000491075 TEX2Q8IWB9 1127 aa23.58■■□□□ 1.37
CLIP2-208ENST00000491075 MICAL1Q8TDZ2 1067 aa23.58■■□□□ 1.37
CLIP2-208ENST00000491075 CDCA3Q99618 268 aaPredicted RBP23.58■■□□□ 1.37
CLIP2-208ENST00000491075 ERVK-5Q9HDB9 667 aa23.58■■□□□ 1.37
CLIP2-208ENST00000491075 C1orf112Q9NSG2 853 aa23.58■■□□□ 1.37
CLIP2-208ENST00000491075 USP34Q70CQ2 3546 aa23.58■■□□□ 1.37
CLIP2-208ENST00000491075 ZDBF2Q9HCK1 2354 aa23.57■■□□□ 1.36
CLIP2-208ENST00000491075 IER5LQ5T953 404 aa23.57■■□□□ 1.36
CLIP2-208ENST00000491075 PDE12Q6L8Q7 609 aaKnown RBP23.57■■□□□ 1.36
CLIP2-208ENST00000491075 CCDC82Q8N4S0 544 aa23.57■■□□□ 1.36
CLIP2-208ENST00000491075 FBXL6Q8N531 539 aa23.57■■□□□ 1.36
CLIP2-208ENST00000491075 ATP8B4Q8TF62 1192 aa23.57■■□□□ 1.36
CLIP2-208ENST00000491075 SLC12A7Q9Y666 1083 aa23.57■■□□□ 1.36
CLIP2-208ENST00000491075 DENND3A2RUS2 1198 aa23.56■■□□□ 1.36
CLIP2-208ENST00000491075 RPS6KA5O75582 802 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms