RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 OXER1Q8TDS5 423 aa17.21■□□□□ 0.35
COL27A1-206ENST00000490831 TNFRSF25Q93038 417 aa17.21■□□□□ 0.35
COL27A1-206ENST00000490831 OSBPL7Q9BZF2 842 aa17.21■□□□□ 0.35
COL27A1-206ENST00000490831 TCEAL9Q9UHQ7 104 aa17.21■□□□□ 0.35
COL27A1-206ENST00000490831 IGSF9BQ9UPX0 1349 aa17.21■□□□□ 0.34
COL27A1-206ENST00000490831 CCDC194A0A1B0GVG4 234 aa17.2■□□□□ 0.34
COL27A1-206ENST00000490831 SMIM35A0A1B0GVV1 85 aa17.2■□□□□ 0.34
COL27A1-206ENST00000490831 ZBTB42B2RXF5 422 aa17.2■□□□□ 0.34
COL27A1-206ENST00000490831 JAK2O60674 1132 aa17.2■□□□□ 0.34
COL27A1-206ENST00000490831 GAS7O60861 476 aa17.2■□□□□ 0.34
COL27A1-206ENST00000490831 MYOGP15173 224 aa17.2■□□□□ 0.34
COL27A1-206ENST00000490831 GCFC2P16383 781 aaKnown RBP17.2■□□□□ 0.34
COL27A1-206ENST00000490831 SFNP31947 248 aa17.2■□□□□ 0.34
COL27A1-206ENST00000490831 IGBP1P78318 339 aa17.2■□□□□ 0.34
COL27A1-206ENST00000490831 ZNF484Q5JVG2 852 aa17.2■□□□□ 0.34
COL27A1-206ENST00000490831 LRCH2Q5VUJ6 765 aa17.2■□□□□ 0.34
COL27A1-206ENST00000490831 MTHFD1LQ6UB35 978 aa17.2■□□□□ 0.34
COL27A1-206ENST00000490831 NEK8Q86SG6 692 aa17.2■□□□□ 0.34
COL27A1-206ENST00000490831 RDM1Q8NG50 284 aa17.2■□□□□ 0.34
COL27A1-206ENST00000490831 TRAPPC12Q8WVT3 735 aa17.2■□□□□ 0.34
COL27A1-206ENST00000490831 DNAJB3Q8WWF6 145 aa17.2■□□□□ 0.34
COL27A1-206ENST00000490831 BBXQ8WY36 941 aaPredicted RBP17.2■□□□□ 0.34
COL27A1-206ENST00000490831 MYLIPQ8WY64 445 aa17.2■□□□□ 0.34
COL27A1-206ENST00000490831 SEPT8Q92599 483 aa17.2■□□□□ 0.34
COL27A1-206ENST00000490831 APBB2Q92870 758 aa17.2■□□□□ 0.34
COL27A1-206ENST00000490831 TEKT3Q9BXF9 490 aa17.2■□□□□ 0.34
COL27A1-206ENST00000490831 SLC28A3Q9HAS3 691 aa17.2■□□□□ 0.34
COL27A1-206ENST00000490831 DISC1Q9NRI5 854 aa17.2■□□□□ 0.34
COL27A1-206ENST00000490831 MICAL3Q7RTP6 2002 aa17.2■□□□□ 0.34
COL27A1-206ENST00000490831 MYH9P35579 1960 aaKnown RBP17.19■□□□□ 0.34
COL27A1-206ENST00000490831 JAK3P52333 1124 aa17.19■□□□□ 0.34
COL27A1-206ENST00000490831 DEFB103AP81534 67 aa17.19■□□□□ 0.34
COL27A1-206ENST00000490831 NME8Q8N427 588 aa17.19■□□□□ 0.34
COL27A1-206ENST00000490831 IL27Q8NEV9 243 aa17.19■□□□□ 0.34
COL27A1-206ENST00000490831 ZBTB10Q96DT7 871 aa17.19■□□□□ 0.34
COL27A1-206ENST00000490831 ZSCAN31Q96LW9 406 aaPredicted RBP17.19■□□□□ 0.34
COL27A1-206ENST00000490831 LLPHQ9BRT6 129 aaKnown RBP17.19■□□□□ 0.34
COL27A1-206ENST00000490831 UNC45AQ9H3U1 944 aa17.19■□□□□ 0.34
COL27A1-206ENST00000490831 KCNMB3Q9NPA1 279 aa17.19■□□□□ 0.34
COL27A1-206ENST00000490831 GABBR1Q9UBS5 961 aa17.19■□□□□ 0.34
COL27A1-206ENST00000490831 DDX25Q9UHL0 483 aaKnown RBP17.19■□□□□ 0.34
COL27A1-206ENST00000490831 SQORQ9Y6N5 450 aa17.19■□□□□ 0.34
COL27A1-206ENST00000490831 WDR81Q562E7 1941 aa17.19■□□□□ 0.34
COL27A1-206ENST00000490831 SIP14410 1827 aa17.19■□□□□ 0.34
COL27A1-206ENST00000490831 KIF28PB7ZC32 967 aa17.18■□□□□ 0.34
COL27A1-206ENST00000490831 SLC37A4O43826 429 aa17.18■□□□□ 0.34
COL27A1-206ENST00000490831 GJB5O95377 273 aa17.18■□□□□ 0.34
COL27A1-206ENST00000490831 MMP1P03956 469 aa17.18■□□□□ 0.34
COL27A1-206ENST00000490831 KLRC1P26715 233 aa17.18■□□□□ 0.34
COL27A1-206ENST00000490831 KRT2P35908 639 aa17.18■□□□□ 0.34
COL27A1-206ENST00000490831 MRPS6P82932 125 aaKnown RBP17.18■□□□□ 0.34
COL27A1-206ENST00000490831 LETM2Q2VYF4 491 aa17.18■□□□□ 0.34
COL27A1-206ENST00000490831 EARS2Q5JPH6 523 aaKnown RBP17.18■□□□□ 0.34
COL27A1-206ENST00000490831 PIK3AP1Q6ZUJ8 805 aa17.18■□□□□ 0.34
COL27A1-206ENST00000490831 GJA10Q969M2 543 aa17.18■□□□□ 0.34
COL27A1-206ENST00000490831 FAM167AQ96KS9 214 aa17.18■□□□□ 0.34
COL27A1-206ENST00000490831 FAM20AQ96MK3 541 aa17.18■□□□□ 0.34
COL27A1-206ENST00000490831 NAP1L4Q99733 375 aaKnown RBP17.18■□□□□ 0.34
COL27A1-206ENST00000490831 BRMS1Q9HCU9 246 aa17.18■□□□□ 0.34
COL27A1-206ENST00000490831 SH2B1Q9NRF2 756 aaPredicted RBP17.18■□□□□ 0.34
COL27A1-206ENST00000490831 CDY2AQ9Y6F7 541 aa17.18■□□□□ 0.34
COL27A1-206ENST00000490831 KDM3AQ9Y4C1 1321 aa17.18■□□□□ 0.34
COL27A1-206ENST00000490831 EYSQ5T1H1 3165 aa17.17■□□□□ 0.34
COL27A1-206ENST00000490831 TBX3O15119 743 aa17.17■□□□□ 0.34
COL27A1-206ENST00000490831 ZNF862O60290 1169 aa17.17■□□□□ 0.34
COL27A1-206ENST00000490831 CA3P07451 260 aa17.17■□□□□ 0.34
COL27A1-206ENST00000490831 NR5A1Q13285 461 aa17.17■□□□□ 0.34
COL27A1-206ENST00000490831 MYO9BQ13459 2157 aa17.17■□□□□ 0.34
COL27A1-206ENST00000490831 LPIN1Q14693 890 aa17.17■□□□□ 0.34
COL27A1-206ENST00000490831 RABEP1Q15276 862 aa17.17■□□□□ 0.34
COL27A1-206ENST00000490831 FBXO47Q5MNV8 452 aa17.17■□□□□ 0.34
COL27A1-206ENST00000490831 IER5Q5VY09 327 aa17.17■□□□□ 0.34
COL27A1-206ENST00000490831 PPP2R2DQ66LE6 453 aa17.17■□□□□ 0.34
COL27A1-206ENST00000490831 IFIH1Q9BYX4 1025 aaKnown RBP17.17■□□□□ 0.34
COL27A1-206ENST00000490831 SAMM50Q9Y512 469 aa17.17■□□□□ 0.34
COL27A1-206ENST00000490831 RBAK-RBAKDNI3L0D1 243 aa17.16■□□□□ 0.34
COL27A1-206ENST00000490831 TLL1O43897 1013 aa17.16■□□□□ 0.34
COL27A1-206ENST00000490831 C22orf31O95567 290 aa17.16■□□□□ 0.34
COL27A1-206ENST00000490831 GHRP10912 638 aa17.16■□□□□ 0.34
COL27A1-206ENST00000490831 FOSL2P15408 326 aa17.16■□□□□ 0.34
COL27A1-206ENST00000490831 PPP2R5CQ13362 524 aa17.16■□□□□ 0.34
COL27A1-206ENST00000490831 KRT40Q6A162 431 aa17.16■□□□□ 0.34
COL27A1-206ENST00000490831 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.16■□□□□ 0.34
COL27A1-206ENST00000490831 TSHZ1Q6ZSZ6 1077 aa17.16■□□□□ 0.34
COL27A1-206ENST00000490831 CCDC83Q8IWF9 413 aa17.16■□□□□ 0.34
COL27A1-206ENST00000490831 CKAP2LQ8IYA6 745 aa17.16■□□□□ 0.34
COL27A1-206ENST00000490831 KIAA0319LQ8IZA0 1049 aa17.16■□□□□ 0.34
COL27A1-206ENST00000490831 USP38Q8NB14 1042 aa17.16■□□□□ 0.34
COL27A1-206ENST00000490831 RAD9AQ99638 391 aa17.16■□□□□ 0.34
COL27A1-206ENST00000490831 FAM49AQ9H0Q0 323 aaPredicted RBP17.16■□□□□ 0.34
COL27A1-206ENST00000490831 PRDM12Q9H4Q4 367 aa17.16■□□□□ 0.34
COL27A1-206ENST00000490831 CEP131Q9UPN4 1083 aa17.16■□□□□ 0.34
COL27A1-206ENST00000490831 TRPV2Q9Y5S1 764 aa17.16■□□□□ 0.34
COL27A1-206ENST00000490831 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.15■□□□□ 0.34
COL27A1-206ENST00000490831 FAM205CA6NFA0 338 aa17.15■□□□□ 0.34
COL27A1-206ENST00000490831 BTBD18B2RXH4 712 aa17.15■□□□□ 0.34
COL27A1-206ENST00000490831 CHMP2AO43633 222 aa17.15■□□□□ 0.34
COL27A1-206ENST00000490831 ARHGEF15O94989 841 aa17.15■□□□□ 0.34
COL27A1-206ENST00000490831 AMHP03971 560 aa17.15■□□□□ 0.34
COL27A1-206ENST00000490831 OATP04181 439 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms