RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 DLL1O00548 723 aa35.55■■■■□ 3.28
LDB1-204ENST00000490751 RPLP2P05387 115 aaKnown RBP35.55■■■■□ 3.28
LDB1-204ENST00000490751 MRPS6P82932 125 aaKnown RBP35.55■■■■□ 3.28
LDB1-204ENST00000490751 KRT76Q01546 638 aa35.55■■■■□ 3.28
LDB1-204ENST00000490751 ATP8B4Q8TF62 1192 aa35.55■■■■□ 3.28
LDB1-204ENST00000490751 IL17RAQ96F46 866 aa35.55■■■■□ 3.28
LDB1-204ENST00000490751 PCDHA2Q9Y5H9 948 aa35.55■■■■□ 3.28
LDB1-204ENST00000490751 STK36Q9NRP7 1315 aa35.55■■■■□ 3.28
LDB1-204ENST00000490751 M0R2N6 131 aa35.54■■■■□ 3.28
LDB1-204ENST00000490751 HBP1O60381 514 aa35.54■■■■□ 3.28
LDB1-204ENST00000490751 NPY5RQ15761 445 aa35.54■■■■□ 3.28
LDB1-204ENST00000490751 SMAP1Q8IYB5 467 aaPredicted RBP35.54■■■■□ 3.28
LDB1-204ENST00000490751 COL4A4P53420 1690 aaPredicted RBP35.53■■■■□ 3.28
LDB1-204ENST00000490751 LOC101059915A0A1B0GWI6 518 aaPredicted RBP35.53■■■■□ 3.28
LDB1-204ENST00000490751 LPIN1Q14693 890 aa35.53■■■■□ 3.28
LDB1-204ENST00000490751 CCDC85BQ15834 202 aaPredicted RBP35.53■■■■□ 3.28
LDB1-204ENST00000490751 GALNT17Q6IS24 598 aa35.53■■■■□ 3.28
LDB1-204ENST00000490751 WDR81Q562E7 1941 aa35.53■■■■□ 3.28
LDB1-204ENST00000490751 MSH4O15457 936 aa35.52■■■■□ 3.28
LDB1-204ENST00000490751 FBXO47Q5MNV8 452 aa35.52■■■■□ 3.28
LDB1-204ENST00000490751 MTHFD1LQ6UB35 978 aa35.52■■■■□ 3.28
LDB1-204ENST00000490751 KCNJ14Q9UNX9 436 aa35.52■■■■□ 3.28
LDB1-204ENST00000490751 PCDHA10Q9Y5I2 948 aa35.52■■■■□ 3.28
LDB1-204ENST00000490751 A0A0C4DFX4 3053 aa35.52■■■■□ 3.28
LDB1-204ENST00000490751 DTNBO60941 627 aa35.51■■■■□ 3.28
LDB1-204ENST00000490751 SEC24BO95487 1268 aa35.51■■■■□ 3.28
LDB1-204ENST00000490751 PSAPP07602 524 aa35.51■■■■□ 3.28
LDB1-204ENST00000490751 ATP4AP20648 1035 aa35.51■■■■□ 3.28
LDB1-204ENST00000490751 IER5Q5VY09 327 aa35.51■■■■□ 3.28
LDB1-204ENST00000490751 CKAP2LQ8IYA6 745 aa35.51■■■■□ 3.28
LDB1-204ENST00000490751 INSL6Q9Y581 213 aa35.51■■■■□ 3.28
LDB1-204ENST00000490751 LOXHD1Q8IVV2 1947 aa35.51■■■■□ 3.27
LDB1-204ENST00000490751 COL1A2P08123 1366 aa35.51■■■■□ 3.27
LDB1-204ENST00000490751 SMIM35A0A1B0GVV1 85 aa35.5■■■■□ 3.27
LDB1-204ENST00000490751 LINC01553A4QN01 128 aa35.5■■■■□ 3.27
LDB1-204ENST00000490751 TMEM62Q0P6H9 643 aa35.5■■■■□ 3.27
LDB1-204ENST00000490751 PRDM6Q9NQX0 595 aa35.5■■■■□ 3.27
LDB1-204ENST00000490751 SAMM50Q9Y512 469 aa35.5■■■■□ 3.27
LDB1-204ENST00000490751 MAFBQ9Y5Q3 323 aaPredicted RBP35.5■■■■□ 3.27
LDB1-204ENST00000490751 TRPV2Q9Y5S1 764 aa35.5■■■■□ 3.27
LDB1-204ENST00000490751 CTDNEP1O95476 244 aa35.49■■■■□ 3.27
LDB1-204ENST00000490751 TDP2O95551 362 aa35.49■■■■□ 3.27
LDB1-204ENST00000490751 KLRC1P26715 233 aa35.49■■■■□ 3.27
LDB1-204ENST00000490751 HTRA4P83105 476 aaPredicted RBP35.49■■■■□ 3.27
LDB1-204ENST00000490751 ZNF484Q5JVG2 852 aa35.49■■■■□ 3.27
LDB1-204ENST00000490751 TSHZ1Q6ZSZ6 1077 aa35.49■■■■□ 3.27
LDB1-204ENST00000490751 MICALL1Q8N3F8 863 aa35.49■■■■□ 3.27
LDB1-204ENST00000490751 SLC5A5Q92911 643 aa35.49■■■■□ 3.27
LDB1-204ENST00000490751 TOP1MTQ969P6 601 aa35.49■■■■□ 3.27
LDB1-204ENST00000490751 RIT2Q99578 217 aa35.49■■■■□ 3.27
LDB1-204ENST00000490751 PHF20Q9BVI0 1012 aa35.49■■■■□ 3.27
LDB1-204ENST00000490751 GABBR1Q9UBS5 961 aa35.49■■■■□ 3.27
LDB1-204ENST00000490751 WDR64B1ANS9 1081 aa35.48■■■■□ 3.27
LDB1-204ENST00000490751 M0QZ92 97 aa35.48■■■■□ 3.27
LDB1-204ENST00000490751 GTPBP6O43824 516 aaPredicted RBP35.48■■■■□ 3.27
LDB1-204ENST00000490751 UPP2O95045 317 aa35.48■■■■□ 3.27
LDB1-204ENST00000490751 NONOQ15233 471 aaKnown RBP eCLIP35.48■■■■□ 3.27
LDB1-204ENST00000490751 Q4G0T1 1027 aa35.48■■■■□ 3.27
LDB1-204ENST00000490751 GAS7O60861 476 aa35.47■■■■□ 3.27
LDB1-204ENST00000490751 LARGE1O95461 756 aa35.47■■■■□ 3.27
LDB1-204ENST00000490751 XBP1P17861 261 aa35.47■■■■□ 3.27
LDB1-204ENST00000490751 LRCH2Q5VUJ6 765 aa35.47■■■■□ 3.27
LDB1-204ENST00000490751 KRT25Q7Z3Z0 450 aa35.47■■■■□ 3.27
LDB1-204ENST00000490751 NECAB1Q8N987 351 aa35.47■■■■□ 3.27
LDB1-204ENST00000490751 BBXQ8WY36 941 aaPredicted RBP35.47■■■■□ 3.27
LDB1-204ENST00000490751 TGS1Q96RS0 853 aaKnown RBP35.47■■■■□ 3.27
LDB1-204ENST00000490751 TEKT3Q9BXF9 490 aa35.47■■■■□ 3.27
LDB1-204ENST00000490751 MTUS1Q9ULD2 1270 aa35.47■■■■□ 3.27
LDB1-204ENST00000490751 MTCH2Q9Y6C9 303 aa35.47■■■■□ 3.27
LDB1-204ENST00000490751 IGSF9BQ9UPX0 1349 aa35.47■■■■□ 3.27
LDB1-204ENST00000490751 EVPLQ92817 2033 aa35.47■■■■□ 3.27
LDB1-204ENST00000490751 TRANK1O15050 2925 aa35.46■■■■□ 3.27
LDB1-204ENST00000490751 CYP3A7-CYP3A51PA0A087WV96 503 aa35.46■■■■□ 3.27
LDB1-204ENST00000490751 ZBTB42B2RXF5 422 aa35.46■■■■□ 3.27
LDB1-204ENST00000490751 POU3F3P20264 500 aaPredicted RBP35.46■■■■□ 3.27
LDB1-204ENST00000490751 CYP3A7P24462 503 aa35.46■■■■□ 3.27
LDB1-204ENST00000490751 NEK4P51957 841 aa35.46■■■■□ 3.27
LDB1-204ENST00000490751 ERVK-21P61565 698 aa35.46■■■■□ 3.27
LDB1-204ENST00000490751 GRB10Q13322 594 aa35.46■■■■□ 3.27
LDB1-204ENST00000490751 ME3Q16798 604 aa35.46■■■■□ 3.27
LDB1-204ENST00000490751 TRMT1LQ7Z2T5 733 aaKnown RBP35.46■■■■□ 3.27
LDB1-204ENST00000490751 GJA10Q969M2 543 aa35.46■■■■□ 3.27
LDB1-204ENST00000490751 AGO3Q9H9G7 860 aaKnown RBP35.46■■■■□ 3.27
LDB1-204ENST00000490751 DISC1Q9NRI5 854 aa35.46■■■■□ 3.27
LDB1-204ENST00000490751 GJB4Q9NTQ9 266 aa35.46■■■■□ 3.27
LDB1-204ENST00000490751 ORC3Q9UBD5 711 aaPredicted RBP35.46■■■■□ 3.27
LDB1-204ENST00000490751 CHMP2AO43633 222 aa35.45■■■■□ 3.27
LDB1-204ENST00000490751 CD52P31358 61 aa35.45■■■■□ 3.27
LDB1-204ENST00000490751 INF2Q27J81 1249 aa35.45■■■■□ 3.27
LDB1-204ENST00000490751 NME8Q8N427 588 aa35.45■■■■□ 3.27
LDB1-204ENST00000490751 SP7Q8TDD2 431 aaPredicted RBP35.45■■■■□ 3.27
LDB1-204ENST00000490751 YME1L1Q96TA2 773 aa35.45■■■■□ 3.27
LDB1-204ENST00000490751 COL25A1Q9BXS0 654 aaPredicted RBP35.45■■■■□ 3.27
LDB1-204ENST00000490751 CELF4Q9BZC1 486 aaKnown RBP35.45■■■■□ 3.27
LDB1-204ENST00000490751 SQORQ9Y6N5 450 aa35.45■■■■□ 3.27
LDB1-204ENST00000490751 PRRC2BQ5JSZ5 2229 aaKnown RBP35.44■■■■□ 3.26
LDB1-204ENST00000490751 KRT40Q6A162 431 aa35.44■■■■□ 3.26
LDB1-204ENST00000490751 MOXD1Q6UVY6 613 aa35.44■■■■□ 3.26
LDB1-204ENST00000490751 GDPD5Q8WTR4 605 aa35.44■■■■□ 3.26
LDB1-204ENST00000490751 GTF3C6Q969F1 213 aa35.44■■■■□ 3.26
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms