RNA–Protein interactions for RNA: ENST00000490540.1

ASIC3-208, Transcript of acid sensing ion channel subunit 3, human

TSL 2

Gene ASIC3, Length 520 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ASIC3-208	ENST00000490540	PTCRA	Q6ISU1	281 aa	Predicted RBP	13.64	□□□□□ -0.23
ASIC3-208	ENST00000490540	TEX2	Q8IWB9	1127 aa		13.64	□□□□□ -0.23
ASIC3-208	ENST00000490540	FAM178B	Q8IXR5	827 aa		13.64	□□□□□ -0.23
ASIC3-208	ENST00000490540	RNF26	Q9BY78	433 aa	Predicted RBP	13.64	□□□□□ -0.23
ASIC3-208	ENST00000490540	IFIH1	Q9BYX4	1025 aa	Known RBP	13.64	□□□□□ -0.23
ASIC3-208	ENST00000490540	INSL6	Q9Y581	213 aa		13.64	□□□□□ -0.23
ASIC3-208	ENST00000490540	CYP46A1	Q9Y6A2	500 aa		13.64	□□□□□ -0.23
ASIC3-208	ENST00000490540	MBLAC1	A4D2B0	266 aa	Predicted RBP	13.63	□□□□□ -0.23
ASIC3-208	ENST00000490540		H3BQ06	376 aa	Predicted RBP	13.63	□□□□□ -0.23
ASIC3-208	ENST00000490540	UPP2	O95045	317 aa		13.63	□□□□□ -0.23
ASIC3-208	ENST00000490540	CYP3A4	P08684	503 aa		13.63	□□□□□ -0.23
ASIC3-208	ENST00000490540	STAT5B	P51692	787 aa		13.63	□□□□□ -0.23
ASIC3-208	ENST00000490540	TMEM62	Q0P6H9	643 aa		13.63	□□□□□ -0.23
ASIC3-208	ENST00000490540	LPIN1	Q14693	890 aa		13.63	□□□□□ -0.23
ASIC3-208	ENST00000490540	TAF2	Q6P1X5	1199 aa		13.63	□□□□□ -0.23
ASIC3-208	ENST00000490540	EP400NL	Q6ZTU2	488 aa		13.63	□□□□□ -0.23
ASIC3-208	ENST00000490540	NIPA1	Q7RTP0	329 aa		13.63	□□□□□ -0.23
ASIC3-208	ENST00000490540	ALYREF	Q86V81	257 aa	Known RBP	13.63	□□□□□ -0.23
ASIC3-208	ENST00000490540	CCDC60	Q8IWA6	550 aa	Predicted RBP	13.63	□□□□□ -0.23
ASIC3-208	ENST00000490540	CCDC12	Q8WUD4	166 aa	Predicted RBP	13.63	□□□□□ -0.23
ASIC3-208	ENST00000490540	PPP4R2	Q9NY27	417 aa		13.63	□□□□□ -0.23
ASIC3-208	ENST00000490540	CDY2A	Q9Y6F7	541 aa		13.63	□□□□□ -0.23
ASIC3-208	ENST00000490540	PRR33	A8MZF0	331 aa		13.62	□□□□□ -0.23
ASIC3-208	ENST00000490540	IPO5	O00410	1097 aa	Known RBP	13.62	□□□□□ -0.23
ASIC3-208	ENST00000490540	BACH1	O14867	736 aa		13.62	□□□□□ -0.23
ASIC3-208	ENST00000490540	DHX15	O43143	795 aa	Known RBP	13.62	□□□□□ -0.23
ASIC3-208	ENST00000490540	EPB41L2	O43491	1005 aa	Known RBP	13.62	□□□□□ -0.23
ASIC3-208	ENST00000490540	ATG7	O95352	703 aa		13.62	□□□□□ -0.23
ASIC3-208	ENST00000490540	GNA11	P29992	359 aa		13.62	□□□□□ -0.23
ASIC3-208	ENST00000490540	PRR16	Q569H4	304 aa		13.62	□□□□□ -0.23
ASIC3-208	ENST00000490540	ABHD15	Q6UXT9	468 aa		13.62	□□□□□ -0.23
ASIC3-208	ENST00000490540	PLPPR4	Q7Z2D5	763 aa		13.62	□□□□□ -0.23
ASIC3-208	ENST00000490540	RPAIN	Q86UA6	219 aa		13.62	□□□□□ -0.23
ASIC3-208	ENST00000490540	CCDC148	Q8NFR7	591 aa		13.62	□□□□□ -0.23
ASIC3-208	ENST00000490540	AIFM3	Q96NN9	605 aa		13.62	□□□□□ -0.23
ASIC3-208	ENST00000490540	ZNF577	Q9BSK1	485 aa		13.62	□□□□□ -0.23
ASIC3-208	ENST00000490540	PDRG1	Q9NUG6	133 aa		13.62	□□□□□ -0.23
ASIC3-208	ENST00000490540	TRIP12	Q14669	1992 aa	Predicted RBP	13.62	□□□□□ -0.23
ASIC3-208	ENST00000490540	IGKV6D-21	A0A0A0MT36	114 aa		13.61	□□□□□ -0.23
ASIC3-208	ENST00000490540	POTEB3	A0JP26	581 aa		13.61	□□□□□ -0.23
ASIC3-208	ENST00000490540	GRXCR2	A6NFK2	248 aa		13.61	□□□□□ -0.23
ASIC3-208	ENST00000490540	RRN3P2	A6NIE6	340 aa		13.61	□□□□□ -0.23
ASIC3-208	ENST00000490540	EDIL3	O43854	480 aa		13.61	□□□□□ -0.23
ASIC3-208	ENST00000490540	NLRP5	P59047	1200 aa		13.61	□□□□□ -0.23
ASIC3-208	ENST00000490540	MRPS6	P82932	125 aa	Known RBP	13.61	□□□□□ -0.23
ASIC3-208	ENST00000490540	HTRA4	P83105	476 aa	Predicted RBP	13.61	□□□□□ -0.23
ASIC3-208	ENST00000490540	SSRP1	Q08945	709 aa	Known RBP	13.61	□□□□□ -0.23
ASIC3-208	ENST00000490540	PTPRO	Q16827	1216 aa		13.61	□□□□□ -0.23
ASIC3-208	ENST00000490540	CSPP1	Q1MSJ5	1256 aa		13.61	□□□□□ -0.23
ASIC3-208	ENST00000490540	EPC2	Q52LR7	807 aa		13.61	□□□□□ -0.23
ASIC3-208	ENST00000490540	FBXO47	Q5MNV8	452 aa		13.61	□□□□□ -0.23
ASIC3-208	ENST00000490540	SWSAP1	Q6NVH7	229 aa		13.61	□□□□□ -0.23
ASIC3-208	ENST00000490540	POTEB	Q6S5H4	581 aa		13.61	□□□□□ -0.23
ASIC3-208	ENST00000490540	TRMT1L	Q7Z2T5	733 aa	Known RBP	13.61	□□□□□ -0.23
ASIC3-208	ENST00000490540	RSPH3	Q86UC2	560 aa		13.61	□□□□□ -0.23
ASIC3-208	ENST00000490540	MRPL38	Q96DV4	380 aa	Known RBP	13.61	□□□□□ -0.23
ASIC3-208	ENST00000490540	YME1L1	Q96TA2	773 aa		13.61	□□□□□ -0.23
ASIC3-208	ENST00000490540	TM6SF1	Q9BZW5	370 aa		13.61	□□□□□ -0.23
ASIC3-208	ENST00000490540	AGO3	Q9H9G7	860 aa	Known RBP	13.61	□□□□□ -0.23
ASIC3-208	ENST00000490540	CPLX1	O14810	134 aa		13.6	□□□□□ -0.23
ASIC3-208	ENST00000490540	ALAD	P13716	330 aa		13.6	□□□□□ -0.23
ASIC3-208	ENST00000490540	ATP4A	P20648	1035 aa		13.6	□□□□□ -0.23
ASIC3-208	ENST00000490540	CD52	P31358	61 aa		13.6	□□□□□ -0.23
ASIC3-208	ENST00000490540	MCTP2	Q6DN12	878 aa		13.6	□□□□□ -0.23
ASIC3-208	ENST00000490540	MIS18BP1	Q6P0N0	1132 aa		13.6	□□□□□ -0.23
ASIC3-208	ENST00000490540	PDXDC2P	Q6P474	469 aa		13.6	□□□□□ -0.23
ASIC3-208	ENST00000490540	TRIM22	Q8IYM9	498 aa		13.6	□□□□□ -0.23
ASIC3-208	ENST00000490540	BANK1	Q8NDB2	785 aa		13.6	□□□□□ -0.23
ASIC3-208	ENST00000490540	BICD2	Q8TD16	824 aa		13.6	□□□□□ -0.23
ASIC3-208	ENST00000490540	APBB2	Q92870	758 aa		13.6	□□□□□ -0.23
ASIC3-208	ENST00000490540	GJA10	Q969M2	543 aa		13.6	□□□□□ -0.23
ASIC3-208	ENST00000490540	TOP1MT	Q969P6	601 aa		13.6	□□□□□ -0.23
ASIC3-208	ENST00000490540	LENG9	Q96B70	501 aa		13.6	□□□□□ -0.23
ASIC3-208	ENST00000490540	ZNF274	Q96GC6	653 aa	Predicted RBP	13.6	□□□□□ -0.23
ASIC3-208	ENST00000490540	ZNF302	Q9NR11	478 aa		13.6	□□□□□ -0.23
ASIC3-208	ENST00000490540	SET	Q01105	290 aa	Predicted RBP	13.59	□□□□□ -0.23
ASIC3-208	ENST00000490540	GPM6B	Q13491	265 aa		13.59	□□□□□ -0.23
ASIC3-208	ENST00000490540	TIGD5	Q53EQ6	642 aa		13.59	□□□□□ -0.23
ASIC3-208	ENST00000490540	TCEAL5	Q5H9L2	206 aa		13.59	□□□□□ -0.23
ASIC3-208	ENST00000490540	FAM160B1	Q5W0V3	765 aa		13.59	□□□□□ -0.23
ASIC3-208	ENST00000490540	MTHFD1L	Q6UB35	978 aa		13.59	□□□□□ -0.23
ASIC3-208	ENST00000490540	TSHZ1	Q6ZSZ6	1077 aa		13.59	□□□□□ -0.23
ASIC3-208	ENST00000490540	CKAP2L	Q8IYA6	745 aa		13.59	□□□□□ -0.23
ASIC3-208	ENST00000490540	NEK9	Q8TD19	979 aa		13.59	□□□□□ -0.23
ASIC3-208	ENST00000490540	SP7	Q8TDD2	431 aa	Predicted RBP	13.59	□□□□□ -0.23
ASIC3-208	ENST00000490540	ATP8B4	Q8TF62	1192 aa		13.59	□□□□□ -0.23
ASIC3-208	ENST00000490540	LINC01599	Q8WXQ3	324 aa		13.59	□□□□□ -0.23
ASIC3-208	ENST00000490540	PPP1R16B	Q96T49	567 aa		13.59	□□□□□ -0.23
ASIC3-208	ENST00000490540	PCDHA2	Q9Y5H9	948 aa		13.59	□□□□□ -0.23
ASIC3-208	ENST00000490540	TRPV2	Q9Y5S1	764 aa		13.59	□□□□□ -0.23
ASIC3-208	ENST00000490540	SI	P14410	1827 aa		13.59	□□□□□ -0.23
ASIC3-208	ENST00000490540	BRWD1	Q9NSI6	2320 aa		13.58	□□□□□ -0.23
ASIC3-208	ENST00000490540	ZBTB42	B2RXF5	422 aa		13.58	□□□□□ -0.24
ASIC3-208	ENST00000490540	ENPP3	O14638	875 aa		13.58	□□□□□ -0.24
ASIC3-208	ENST00000490540	MSH4	O15457	936 aa		13.58	□□□□□ -0.24
ASIC3-208	ENST00000490540	CHMP2A	O43633	222 aa		13.58	□□□□□ -0.24
ASIC3-208	ENST00000490540	HBP1	O60381	514 aa		13.58	□□□□□ -0.24
ASIC3-208	ENST00000490540	DEXI	O95424	95 aa		13.58	□□□□□ -0.24
ASIC3-208	ENST00000490540	KLRC1	P26715	233 aa		13.58	□□□□□ -0.24
ASIC3-208	ENST00000490540	CIITA	P33076	1130 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms