RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 FBXL21Q9UKT6 434 aa15.91■□□□□ 0.14
EXOSC3-207ENST00000490516 PADI3Q9ULW8 664 aa15.91■□□□□ 0.14
EXOSC3-207ENST00000490516 HCFC2Q9Y5Z7 792 aa15.91■□□□□ 0.14
EXOSC3-207ENST00000490516 ATRXP46100 2492 aa15.9■□□□□ 0.14
EXOSC3-207ENST00000490516 DHX16O60231 1041 aaKnown RBP15.9■□□□□ 0.14
EXOSC3-207ENST00000490516 MTHFRP42898 656 aa15.9■□□□□ 0.14
EXOSC3-207ENST00000490516 ATXN1P54253 815 aaKnown RBP15.9■□□□□ 0.14
EXOSC3-207ENST00000490516 RARS2Q5T160 578 aaKnown RBP15.9■□□□□ 0.14
EXOSC3-207ENST00000490516 C12orf76Q8N812 135 aaPredicted RBP15.9■□□□□ 0.14
EXOSC3-207ENST00000490516 MRPS27Q92552 414 aaKnown RBP15.9■□□□□ 0.14
EXOSC3-207ENST00000490516 GPATCH3Q96I76 525 aa15.9■□□□□ 0.14
EXOSC3-207ENST00000490516 TMX1Q9H3N1 280 aa15.9■□□□□ 0.14
EXOSC3-207ENST00000490516 JMJD4Q9H9V9 463 aa15.9■□□□□ 0.14
EXOSC3-207ENST00000490516 TUBE1Q9UJT0 475 aa15.9■□□□□ 0.14
EXOSC3-207ENST00000490516 GHRHRQ02643 423 aa15.89■□□□□ 0.13
EXOSC3-207ENST00000490516 TMEM62Q0P6H9 643 aa15.89■□□□□ 0.13
EXOSC3-207ENST00000490516 PPFIA1Q13136 1202 aa15.89■□□□□ 0.13
EXOSC3-207ENST00000490516 SEMA3FQ13275 785 aa15.89■□□□□ 0.13
EXOSC3-207ENST00000490516 GRIK4Q16099 956 aa15.89■□□□□ 0.13
EXOSC3-207ENST00000490516 MARCH8Q5T0T0 291 aa15.89■□□□□ 0.13
EXOSC3-207ENST00000490516 FAM102BQ5T8I3 360 aa15.89■□□□□ 0.13
EXOSC3-207ENST00000490516 PLCD3Q8N3E9 789 aa15.89■□□□□ 0.13
EXOSC3-207ENST00000490516 FEZF2Q8TBJ5 459 aa15.89■□□□□ 0.13
EXOSC3-207ENST00000490516 ZKSCAN3Q9BRR0 538 aa15.89■□□□□ 0.13
EXOSC3-207ENST00000490516 FAM49AQ9H0Q0 323 aaPredicted RBP15.89■□□□□ 0.13
EXOSC3-207ENST00000490516 DBR1Q9UK59 544 aaKnown RBP15.89■□□□□ 0.13
EXOSC3-207ENST00000490516 LZTS1Q9Y250 596 aa15.89■□□□□ 0.13
EXOSC3-207ENST00000490516 PCDHB7Q9Y5E2 793 aa15.89■□□□□ 0.13
EXOSC3-207ENST00000490516 MBLAC1A4D2B0 266 aaPredicted RBP15.88■□□□□ 0.13
EXOSC3-207ENST00000490516 STK25O00506 426 aa15.88■□□□□ 0.13
EXOSC3-207ENST00000490516 MARK3P27448 753 aa15.88■□□□□ 0.13
EXOSC3-207ENST00000490516 SARSP49591 514 aaKnown RBP15.88■□□□□ 0.13
EXOSC3-207ENST00000490516 PAK2Q13177 524 aa15.88■□□□□ 0.13
EXOSC3-207ENST00000490516 NEDD9Q14511 834 aa15.88■□□□□ 0.13
EXOSC3-207ENST00000490516 CWH43Q9H720 699 aa15.88■□□□□ 0.13
EXOSC3-207ENST00000490516 NGRNQ9NPE2 291 aaKnown RBP15.88■□□□□ 0.13
EXOSC3-207ENST00000490516 CYP26B1Q9NR63 512 aa15.88■□□□□ 0.13
EXOSC3-207ENST00000490516 SPATA31C2B4DYI2 1134 aa15.87■□□□□ 0.13
EXOSC3-207ENST00000490516 PPP1R11O60927 126 aaPredicted RBP15.87■□□□□ 0.13
EXOSC3-207ENST00000490516 EOMESO95936 686 aa15.87■□□□□ 0.13
EXOSC3-207ENST00000490516 SP9P0CG40 484 aa15.87■□□□□ 0.13
EXOSC3-207ENST00000490516 IGBP1P78318 339 aa15.87■□□□□ 0.13
EXOSC3-207ENST00000490516 MRPS9P82933 396 aaKnown RBP15.87■□□□□ 0.13
EXOSC3-207ENST00000490516 TDGQ13569 410 aa15.87■□□□□ 0.13
EXOSC3-207ENST00000490516 TMEM266Q2M3C6 531 aa15.87■□□□□ 0.13
EXOSC3-207ENST00000490516 KIAA0319Q5VV43 1072 aa15.87■□□□□ 0.13
EXOSC3-207ENST00000490516 KIAA1841Q6NSI8 718 aa15.87■□□□□ 0.13
EXOSC3-207ENST00000490516 ZC3H14Q6PJT7 736 aaKnown RBP15.87■□□□□ 0.13
EXOSC3-207ENST00000490516 TMC7Q7Z402 723 aa15.87■□□□□ 0.13
EXOSC3-207ENST00000490516 FCHSD1Q86WN1 690 aa15.87■□□□□ 0.13
EXOSC3-207ENST00000490516 SUMF1Q8NBK3 374 aa15.87■□□□□ 0.13
EXOSC3-207ENST00000490516 PNMA1Q8ND90 353 aa15.87■□□□□ 0.13
EXOSC3-207ENST00000490516 RTEL1Q9NZ71 1219 aa15.87■□□□□ 0.13
EXOSC3-207ENST00000490516 PUF60Q9UHX1 559 aaKnown RBP15.87■□□□□ 0.13
EXOSC3-207ENST00000490516 DUSP12Q9UNI6 340 aa15.87■□□□□ 0.13
EXOSC3-207ENST00000490516 USTQ9Y2C2 406 aa15.87■□□□□ 0.13
EXOSC3-207ENST00000490516 SQORQ9Y6N5 450 aa15.87■□□□□ 0.13
EXOSC3-207ENST00000490516 GPR179Q6PRD1 2367 aa15.87■□□□□ 0.13
EXOSC3-207ENST00000490516 C2orf16Q68DN1 1984 aa15.87■□□□□ 0.13
EXOSC3-207ENST00000490516 CACNA1IQ9P0X4 2223 aa15.87■□□□□ 0.13
EXOSC3-207ENST00000490516 DCDC2BA2VCK2 349 aa15.86■□□□□ 0.13
EXOSC3-207ENST00000490516 NARSO43776 548 aaKnown RBP15.86■□□□□ 0.13
EXOSC3-207ENST00000490516 MGEA5O60502 916 aa15.86■□□□□ 0.13
EXOSC3-207ENST00000490516 CLASP2O75122 1294 aaKnown RBP15.86■□□□□ 0.13
EXOSC3-207ENST00000490516 PBX3P40426 434 aa15.86■□□□□ 0.13
EXOSC3-207ENST00000490516 HAND2P61296 217 aa15.86■□□□□ 0.13
EXOSC3-207ENST00000490516 PLCB3Q01970 1234 aa15.86■□□□□ 0.13
EXOSC3-207ENST00000490516 ALX1Q15699 326 aa15.86■□□□□ 0.13
EXOSC3-207ENST00000490516 GNPTABQ3T906 1256 aa15.86■□□□□ 0.13
EXOSC3-207ENST00000490516 SPECC1Q5M775 1068 aa15.86■□□□□ 0.13
EXOSC3-207ENST00000490516 IER5Q5VY09 327 aa15.86■□□□□ 0.13
EXOSC3-207ENST00000490516 AMNQ9BXJ7 453 aa15.86■□□□□ 0.13
EXOSC3-207ENST00000490516 RNF216Q9NWF9 866 aaPredicted RBP15.86■□□□□ 0.13
EXOSC3-207ENST00000490516 MAP3K20Q9NYL2 800 aaKnown RBP15.86■□□□□ 0.13
EXOSC3-207ENST00000490516 PCDHA1Q9Y5I3 950 aa15.86■□□□□ 0.13
EXOSC3-207ENST00000490516 TRPV2Q9Y5S1 764 aa15.86■□□□□ 0.13
EXOSC3-207ENST00000490516 IGSF9BQ9UPX0 1349 aa15.86■□□□□ 0.13
EXOSC3-207ENST00000490516 KRBA1A5PL33 1030 aa15.85■□□□□ 0.13
EXOSC3-207ENST00000490516 FGAP02671 866 aa15.85■□□□□ 0.13
EXOSC3-207ENST00000490516 FGFR1P11362 822 aa15.85■□□□□ 0.13
EXOSC3-207ENST00000490516 LAG3P18627 525 aa15.85■□□□□ 0.13
EXOSC3-207ENST00000490516 TCF7P36402 384 aaPredicted RBP15.85■□□□□ 0.13
EXOSC3-207ENST00000490516 ASPRV1Q53RT3 343 aa15.85■□□□□ 0.13
EXOSC3-207ENST00000490516 ATAT1Q5SQI0 421 aa15.85■□□□□ 0.13
EXOSC3-207ENST00000490516 CHAMP1Q96JM3 812 aa15.85■□□□□ 0.13
EXOSC3-207ENST00000490516 INPP4AQ96PE3 977 aaPredicted RBP15.85■□□□□ 0.13
EXOSC3-207ENST00000490516 KCNK12Q9HB15 430 aa15.85■□□□□ 0.13
EXOSC3-207ENST00000490516 C2orf71A6NGG8 1288 aa15.84■□□□□ 0.13
EXOSC3-207ENST00000490516 M0QZ92 97 aa15.84■□□□□ 0.13
EXOSC3-207ENST00000490516 CFHP08603 1231 aa15.84■□□□□ 0.13
EXOSC3-207ENST00000490516 PDE4AP27815 886 aa15.84■□□□□ 0.13
EXOSC3-207ENST00000490516 NFX1Q12986 1120 aaKnown RBP15.84■□□□□ 0.13
EXOSC3-207ENST00000490516 MIER1Q8N108 512 aa15.84■□□□□ 0.13
EXOSC3-207ENST00000490516 MRPL43Q8N983 215 aaKnown RBP15.84■□□□□ 0.13
EXOSC3-207ENST00000490516 FIBPO43427 364 aa15.83■□□□□ 0.12
EXOSC3-207ENST00000490516 DCNP07585 359 aaKnown RBP15.83■□□□□ 0.12
EXOSC3-207ENST00000490516 ADRB1P08588 477 aa15.83■□□□□ 0.12
EXOSC3-207ENST00000490516 RFX1P22670 979 aa15.83■□□□□ 0.12
EXOSC3-207ENST00000490516 SMC1AQ14683 1233 aaKnown RBP15.83■□□□□ 0.12
EXOSC3-207ENST00000490516 XRRA1Q6P2D8 792 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms